slc2a12 (slc2a12,LOC107571322,LOC107701735,LOC107549056,LOC107671860)


Basic Information

Item Value
gene id slc2a12
gene name slc2a12,LOC107571322,LOC107701735,LOC107549056,LOC107671860
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 9908788 ~ 9917655 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224506.1
CACAGCGCCTTCCAAAACAaggaacgtgtgtgtgtgtgtgtgtgtgtgtcgacaCAAGGACAGATAAGTTACTGCCACCGGGAGGAGAGAGTCGAGGAGCTGAAATGATTTCGTAGACAGCCTTCCACGTTATTGACGTTAAAAAGTTGTACCACAACCCTTGAAGAGCATGGACGCATCTGAGGAGCCCATAAGAATGACTTCTGATCCTCAGAGCAAAACGTGTCTACAAAATCAGGAGACACACAAATATCAAGTGAAAAGCCCATCTGCAAAATCAGgCAATGGTGCAGCGCTGGTGTTGTGCTCTGTGTCTGTGGCGTGCCTGAGTGGGTTGATGATGGGCTACGAGATGAGTCTGATATCAGGAGCATTACTTCAACTCAGGGATGTTTTGACTCTCTCCTGCCCGCAGCAAGAGCAAGTTGTTGGCTCTCTTCTGTTTGGAGCCTTCCTCCTCTCCCTGGGTGGTGGCACCATCCTGGACCGCTACGGACGGCGGTTCTCCATCATCCTCACGGCGCTGCTATGTGTCTTGGGCACActtctaagtgtgtgtgtggtgtcatTTTGGACGCTAGTAGTCGGGCGGATGCTTGTCGGCATGGCAGTAGCGCTGTCAGGCACGGCGTCCTGTCTTTACGCGGCAGAAGTGGCACCGGCCGCCTGGCGCGGgaggtgcgtgtgtgtatatgagttGATGGTAGTTTTAGGGATGCTGTTGGGTTTTGGACTGAGCTGGGCGTTCGCAGGGGTCCCGGATGGATGGAGGTTTACGTTTGGTGGCGTGCTGCTCCCTGCTTTGCTGCAAGCCGGCATCATGCCACTTTTGCCGCAGAGTCCTCGCTTTTTGCTGGCCCAGCAGCGCGAGAAAGAGGCTCACGCAACTCTCCTCCGTCTTCGTGTTGGCATCAAAGGAGTAGACACGGTGGAGAATGAACTTGGCTCCATACGCATGGCATTGGGGGCGGAGCGCCTGCACGGCTTCCTGGACCTCTTCCGCTCTCGTGACAATATGCTTCAAAGACTGCTCGTTGGTGCAGCGCTGGTTTTCTTGCAGCAGGCTACGGGACAGCCCAACATTTTAGCGTATGCGTCGACTGTTCTCAGCAGTGTGGGCTTCCATGGGAATGAGGCGGCGACTCTTGCATCTACAGGGTTTGGTGTGGTTAAAGTGGGCGGGACCATTCCTGCAGTCTTTCTAGTGGACAAAGTGGGGCCTAAAGCCTTATTATGTGTTGGCGCAGTTGTTATGACATTGTCAACAGCAACTCTGGGGGCCGTTACTATGCAGAGCCGCACACATGTTTCTAGCCTATGCAGAGGTCCTGTTAATAAAGCAAACCTCACAGTTTTTGGGACGGGAGAAGAGACTGATTTCCAGACAAACACTCCACTGGGATTGTACCATCCTTCTAACCATGAACCTCAAGACAAGCACAAAACAAATGCTTTCCTCACAAGCATTAATGACACTAAGGACCACTGGATTTTAAGTCACACTCCAGATCATAGGACAGCATTGATGGAACTGGCTGAGGGTTCTGAGAAAGACGGTTCCAAAATTGCACTTCAGTCTCTTCATGTTAATGAAGTGTCACCCTCACTGAAATGGATCTCTCTCGTCAGCTTGCTGGTATATGTAGCTGGATTTTCCATCAGTTTGGGACCAATGGTTCATGTGGTTTTGAGTGCGATCTTTCCAACTGGCATCCGTGGAAAGGCCGTGTCCGTCATCTCTGCCTTTAACTGGGCTACAAATTTGCTTATATCGATGACCTTCCTTACTCTGACAGAGAGGATCGGTCTGCCCTCGGTGATCTTCTCCTACGCTGCTATGAGCTTCATGTTGGTGGTGTTTGTGATTGTATTTGTGCCAGAGACGAAAGGCCGATCACTGGAACAGATCTCTAAGGAGCTTGCCATGAAAAATCACCTGAGCAGTAGACTACTATGTCATAGAAGAAAACACGAGGCTACAGCACAACCCTTACAGGAGGAAAAATCCCTCGCTATTTGACTTTTTAACTAGATAAAGAGTGGAAGAGCACTAGGGTATTGCAGACAACCGATTGTTCTTGGTGCCATTACAGGACAGACAAACCCGTGACTGCATTTTTCAAAGTATTGAAGATATATAACTGATTGATGCTGCCACGGATATAATTTAGCTTGATAAACCTTCCAATGGCATGATGGGTCAGTTGAGATATGTTTATATGtcaaattgatttatttgtgttctttgtaaaaatgcattttaagtagTTTTGGTACTGACTGAGATTTTATATGGAGAATTTACAGCTAACTGTTATGAAACGCTTTGAAAATTGTGCAATCATGACCATAATCCTGCCATGACAAGTCAAAGCCAAGTTCGGTGGCCCAGTCACATATCAGTGTTTGCGTGCTGAGCACTACTTATGAGGTGAAGGTGTCTCTCCGGCAGGAGATGCCTTCATGTAAGCAAACAACATTATGTAACATTACGAACTGAAATGTTATGTAATACAAACTGAAAACGTTTTGACTTAAAACagcctttttgcatttttttgactaaaagcacatttgataaatataaaacaaaaataaattaagacaaaaagtAAAGATTGTAGCGATCTGTTTTCTATagattgctctttttttcagtttctcagggaattatgcaaatgtaatgACTTCCCTGAGGTAAGTGTGATATCACGTGACCTGTTGTTCACAAGCTGATTACATAAGGCATCATAAGTTTCAGTaagttatattttcttttatggccCTCTAAAGTTTATTCGTGTTGGTTCCCGCACCAATTTTCACAGTGTAATGCACACAAAGTcctcaatttatttattttttttttttacttcgcTTTTAACCACATTTCAAACGGCCAATTGTGACCAATTTGCAGAATATGAAGCCTGTTTGTGcagattcaatttaaataaaaaaaaataatttatacataataatagcattaaaagaaaaaaaaattaattaaaaagtaaaatagccACAAAAGTATTAAGTGAGGCAGTGGACAAGCAGTACTTTGTGAATGACCTGTGAGCAAAATAGAAGTAATGCTGGGTTATTTCTCTCGCACAGACATAGACGCAATGACTTAATATAgggattattttattttgtttattataaaatacaaaagtttTCACATACTACATAAACGTATGAACCAACAA

Function

symbol description
slc2a12 Predicted to enable transmembrane transporter activity. Acts upstream of or within glucose import in response to insulin stimulus; heart contraction; and heart valve morphogenesis. Predicted to be located in endomembrane system; perinuclear region of cytoplasm; and plasma membrane. Predicted to be integral component of membrane. Is expressed in several structures, including alar plate midbrain region; immature eye; muscle; nervous system; and pleuroperitoneal region. Orthologous to human SLC2A12 (solute carrier family 2 member 12).

NR:

description
solute carrier family 2, facilitated glucose transporter member 12-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0008643 carbohydrate transport biological_process
GO:0012505 endomembrane system cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K08149 SLC2A12, GLUT12; MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224506.1 True 3212 mRNA 0.44 6 9908788 9917655

Neighbor

gene id symbol gene type direction distance location
tcf21 tcf21,LOC107571274,LOC107723756,LOC107756361,LOC107671849,LOC107701707,LOC107549058 coding downstream 23934 9883437 ~ 9884854 (-)
eya4 eya4,LOC107671847,LOC107756388,LOC107701730,LOC107571227 coding downstream 43001 9837435 ~ 9865787 (-)
lca5 LOC107571182,LOC107708802,LOC107671846 coding downstream 86491 9812001 ~ 9822297 (-)
LOC122328653 phip coding downstream 110371 9767539 ~ 9798417 (-)
si:dkey-261l7.2 si:dkey-261l7.2,LOC107708806,LOC107571115,LOC107549066 coding downstream 143990 9761699 ~ 9764798 (-)
sgk1 sgk1,LOC107571333,LOC107723736,LOC107549055,LOC107756394,LOC107701736 coding upstream 2392 9920047 ~ 9941008 (-)
aldh8a1 aldh8a1,LOC107723725,LOC107671839,LOC107756363,LOC107701738 coding upstream 45339 9962994 ~ 9968091 (-)
hbs1l hbs1l,LOC107723734,LOC107756395,LOC107701737 coding upstream 53847 9971502 ~ 9994574 (-)
mtfr2 mtfr2,LOC107723766,LOC107671894,LOC107571368,LOC107549052,LOC107701742 coding upstream 114882 10032537 ~ 10039425 (-)
nlrp12l si:dkey-126g1.7,LOC107671883,LOC107723749,LOC107572771 coding upstream 123793 10041448 ~ 10049914 (-)
LOC122328702 NA non-coding downstream 31620 9867920 ~ 9877168 (-)
G156245 NA non-coding downstream 77663 9782108 ~ 9831125 (-)
G156235 NA non-coding downstream 93294 9678261 ~ 9815494 (-)
G156056 NA non-coding downstream 296192 9612250 ~ 9612596 (-)
G156054 NA non-coding downstream 300840 9607488 ~ 9607948 (-)
G156261 NA non-coding upstream 33488 9951143 ~ 9952031 (-)
G156264 NA non-coding upstream 98801 10016456 ~ 10017421 (-)
G156278 NA non-coding upstream 134871 10052526 ~ 10053549 (-)
G156283 NA non-coding upstream 140356 10058011 ~ 10059303 (-)
G156313 NA non-coding upstream 194962 10112617 ~ 10116955 (-)
zgc:153284 LOC107701733,LOC107571300,LOC107756391,LOC107549061,LOC107708783 other downstream 75106 9831809 ~ 9833682 (-)
hmgn3 hmgn3,LOC107756386,LOC107671890 other downstream 100419 9801785 ~ 9808369 (-)
ccdc187 LOC107708822,LOC107570908,LOC107718813,LOC107656553,LOC107695760,LOC107586514 other downstream 698824 9195310 ~ 9209964 (-)
ctnnbip1 ctnnbip1 other downstream 811486 9079532 ~ 9097302 (-)
sst6 LOC107681964,LOC107571825,LOC107695779,LOC107570713,LOC107681961 other downstream 982037 8921564 ~ 8926751 (-)
ankrd52a ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831,LOC107723718 other upstream 300818 10218473 ~ 10385967 (-)
LOC122329224 NA other upstream 438286 10355941 ~ 10359786 (-)
LOC122328779 taf8,LOC107723763,LOC107756368,LOC107549030,LOC107671856,LOC107594013,LOC107701755 other upstream 446250 10363905 ~ 10367369 (-)
LOC122328798 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other upstream 758025 10675680 ~ 10678150 (-)
G156746 NA other upstream 1183089 11100744 ~ 11105223 (-)

Expression


Co-expression Network