mtfr2 (mtfr2,LOC107723766,LOC107671894,LOC107571368,LOC107549052,LOC107701742)


Basic Information

Item Value
gene id mtfr2
gene name mtfr2,LOC107723766,LOC107671894,LOC107571368,LOC107549052,LOC107701742
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10032537 ~ 10039425 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224531.1
GTTTCTGTGTTTGAGAAGTCAACACACCATACACCTCTTCTGCAAGTGTCTCCAGGCTGACCATCATGCCAAGCTCATTTTTCATGGTGTTGATGTTGCGGGGTGATTCAGCCAGGTACCGCAAAGCCTTAAGAGGTCACGTGGAGAAGTTTGGTGCAGTGTGTTGTTGGCTCATCTGTCAGCAGAAATCCAGCGAACGCTGTCAATGTCTCTACTGGAGGACATCGCTGACCTGCTGAGATGTGTTCTGGAATATTTTGGAGTGCCACCTGACATGCTGGTTCCAGTATGGGACAGTACATATTGTGGACAATACCGAAGCATAGTCCGTATGATTGGGACCAACCTTCCCCTCTCTCCTCAGCCTCGACTGCGCTTTCAGATTCCTCTGCAGACATTCAGTAGACACGGCCATATTGATGTGACAGTGGACACGCCAGTCATTCCTACATTAGCGGATGTGCTTTGGCTGGTGGAGGATGAAGGGGACAGTCACACTAAATTCAGGAATGCTGTCCCTTTGAGGAAAGCTTTTGAGATGCCTTTATTGGGGTCTGAACATCCGGTGTCCGTGTCTGTCCCGGCTCAGAGGGGAGGCGGGGTGCTGGGACAGGGCACTCAGCCAGAGGCCCTACAGAAGATCTCAGCTCTGGAAGAGGAACTGCAGAGACTGCGAGCACAGATTGCTATGATAGTCACAGCTCCAGCTGTCCCATCCATATTTCCAGCTGATCCTGGCACTCCATGCTGTACTCCTCTTCCAGTTCCTGTCCTCACCTCCACTCCGGTCTGTCCTCCGCTGccaccaccacctccaccaccacctccaccaCCACTACCTCCTCCGGCTACAGGCAGCTGCGTGGAGGTGTCAGTGTCTGATGTGATTAGACAAAGACAGGcagcaaaaagagaaaagcttGCACAGAGCGATCCGTCTGTGTCTACAGCGCCTGCTGCAGGGCCCTCGATGTTAGAGGTGCTCAAAGACCTGAATCAAGTCAAACTGCGTTCTGTGGAGAGATCTCCAGGTGGAACTCCAGTAAGGAGGCGGAGGAGTAAAGGTGTAGCATGTTCATCTGATCCGGCAGCTCTTATCGCCGAAGCCCTGAAAAGGAAGTTTGCGCACAAACTCAGGGACGATTCATTTGGTAAAGAGAACTGCTCGGCTGAACCCTCACCTTTCAGCAGTCCAGATACTCCCAGGATTCTCCCTCACACCAGACGCAGCCAGGGGCGCATTCACCTTTGACCCTCAACCTTAAAGTCTTTCAGGGACAAAGTTGTGTCATGGACTGATGTGACAGacctattctttttttttttaatgtttgtttcacTGTCTCTCTTTGCCTTtcccctttctctctctaaaTGAATCACTTGGGCCTCCATCTGAGTACactgtgcatgttttttgagatttttgagCAGAcctcatcattttttttgtatgtacagatttttatttgttaatattgtgtACAATGGACAATTGTAAATGACTACGACTATTGATACAGGATGGCAATAATTATCTCATAGGATGCTACAGTTAATTTCTTTCAGTTACCAATGTAGTACATTAATAAGGTCTGATCTATgcaatgctgctttttttacacagtttgttgttttggtttttttgtttgtttttaaaacctcaatcaggggtgtcaaactgAGCTCCTGGAGAGCCCTGCTGGGTTGACTTCCAACTCCGCTCCAACACACATGCGCAGGGCTATAGTAAAGAGCGGTACTTAGTTTGCTAATAATGTGTACATCCATGTTTCTCCTGTGTTATCATCCTCTTCTACAAAGTGCTAATGCAGTATCGCattcaaaagcaataaaaaagttataagcctttcaaatgtattcaaaGTGTGTGCTATTgcataatacaatttattatacagttctctggaatacttgattctgactGGTTagtcatttgtttaaataaaaaaacttcatCCCCTAACACTAGCACTCTTCATTaattatctataaataaatcCTGCATC
>XM_043224532.1
CGGACCAATCACAAACGCTCTCAAGCAAAGAGCTTTATTTGAGTTTACCTACACGGAAAGCGTGACACAAGGAAGAGGTCACGTGGAGAAGTTTGGTGCAGTGTGTTGTTGGCTCATCTGTCAGCAGAAATCCAGCGAACGCTGTCAATGTCTCTACTGGAGGACATCGCTGACCTGCTGAGATGTGTTCTGGAATATTTTGGAGTGCCACCTGACATGCTGGTTCCAGTATGGGACAGTACATATTGTGGACAATACCGAAGCATAGTCCGTATGATTGGGACCAACCTTCCCCTCTCTCCTCAGCCTCGACTGCGCTTTCAGATTCCTCTGCAGACATTCAGTAGACACGGCCATATTGATGTGACAGTGGACACGCCAGTCATTCCTACATTAGCGGATGTGCTTTGGCTGGTGGAGGATGAAGGGGACAGTCACACTAAATTCAGGAATGCTGTCCCTTTGAGGAAAGCTTTTGAGATGCCTTTATTGGGGTCTGAACATCCGGTGTCCGTGTCTGTCCCGGCTCAGAGGGGAGGCGGGGTGCTGGGACAGGGCACTCAGCCAGAGGCCCTACAGAAGATCTCAGCTCTGGAAGAGGAACTGCAGAGACTGCGAGCACAGATTGCTATGATAGTCACAGCTCCAGCTGTCCCATCCATATTTCCAGCTGATCCTGGCACTCCATGCTGTACTCCTCTTCCAGTTCCTGTCCTCACCTCCACTCCGGTCTGTCCTCCGCTGccaccaccacctccaccaccacctccaccaCCACTACCTCCTCCGGCTACAGGCAGCTGCGTGGAGGTGTCAGTGTCTGATGTGATTAGACAAAGACAGGcagcaaaaagagaaaagcttGCACAGAGCGATCCGTCTGTGTCTACAGCGCCTGCTGCAGGGCCCTCGATGTTAGAGGTGCTCAAAGACCTGAATCAAGTCAAACTGCGTTCTGTGGAGAGATCTCCAGGTGGAACTCCAGTAAGGAGGCGGAGGAGTAAAGGTGTAGCATGTTCATCTGATCCGGCAGCTCTTATCGCCGAAGCCCTGAAAAGGAAGTTTGCGCACAAACTCAGGGACGATTCATTTGGTAAAGAGAACTGCTCGGCTGAACCCTCACCTTTCAGCAGTCCAGATACTCCCAGGATTCTCCCTCACACCAGACGCAGCCAGGGGCGCATTCACCTTTGACCCTCAACCTTAAAGTCTTTCAGGGACAAAGTTGTGTCATGGACTGATGTGACAGacctattctttttttttttaatgtttgtttcacTGTCTCTCTTTGCCTTtcccctttctctctctaaaTGAATCACTTGGGCCTCCATCTGAGTACactgtgcatgttttttgagatttttgagCAGAcctcatcattttttttgtatgtacagatttttatttgttaatattgtgtACAATGGACAATTGTAAATGACTACGACTATTGATACAGGATGGCAATAATTATCTCATAGGATGCTACAGTTAATTTCTTTCAGTTACCAATGTAGTACATTAATAAGGTCTGATCTATgcaatgctgctttttttacacagtttgttgttttggtttttttgtttgtttttaaaacctcaatcaggggtgtcaaactgAGCTCCTGGAGAGCCCTGCTGGGTTGACTTCCAACTCCGCTCCAACACACATGCGCAGGGCTATAGTAAAGAGCGGTACTTAGTTTGCTAATAATGTGTACATCCATGTTTCTCCTGTGTTATCATCCTCTTCTACAAAGTGCTAATGCAGTATCGCattcaaaagcaataaaaaagttataagcctttcaaatgtattcaaaGTGTGTGCTATTgcataatacaatttattatacagttctctggaatacttgattctgactGGTTagtcatttgtttaaataaaaaaacttcatCCCCTAACACTAGCACTCTTCATTaattatctataaataaatcCTGCATC
>XM_043224534.1
ATACGCATGAATTGAATTTACATTGTCACGTGGAGAAGTTTGGTGCAGTGTGTTGTTGGCTCATCTGTCAGCAGAAATCCAGCGAACGCTGTCAATGTCTCTACTGGAGGACATCGCTGACCTGCTGAGATGTGTTCTGGAATATTTTGGAGTGCCACCTGACATGCTGGTTCCAGTATGGGACAGTACATATTGTGGACAATACCGAAGCATAGTCCGTATGATTGGGACCAACCTTCCCCTCTCTCCTCAGCCTCGACTGCGCTTTCAGATTCCTCTGCAGACATTCAGTAGACACGGCCATATTGATGTGACAGTGGACACGCCAGTCATTCCTACATTAGCGGATGTGCTTTGGCTGGTGGAGGATGAAGGGGACAGTCACACTAAATTCAGGAATGCTGTCCCTTTGAGGAAAGCTTTTGAGATGCCTTTATTGGGGTCTGAACATCCGGTGTCCGTGTCTGTCCCGGCTCAGAGGGGAGGCGGGGTGCTGGGACAGGGCACTCAGCCAGAGGCCCTACAGAAGATCTCAGCTCTGGAAGAGGAACTGCAGAGACTGCGAGCACAGATTGCTATGATAGTCACAGCTCCAGCTGTCCCATCCATATTTCCAGCTGATCCTGGCACTCCATGCTGTACTCCTCTTCCAGTTCCTGTCCTCACCTCCACTCCGGTCTGTCCTCCGCTGccaccaccacctccaccaccacctccaccaCCACTACCTCCTCCGGCTACAGGCAGCTGCGTGGAGGTGTCAGTGTCTGATGTGATTAGACAAAGACAGGcagcaaaaagagaaaagcttGCACAGAGCGATCCGTCTGTGTCTACAGCGCCTGCTGCAGGGCCCTCGATGTTAGAGGTGCTCAAAGACCTGAATCAAGTCAAACTGCGTTCTGTGGAGAGATCTCCAGGTGGAACTCCAGTAAGGAGGCGGAGGAGTAAAGGTGTAGCATGTTCATCTGATCCGGCAGCTCTTATCGCCGAAGCCCTGAAAAGGAAGTTTGCGCACAAACTCAGGGACGATTCATTTGGTAAAGAGAACTGCTCGGCTGAACCCTCACCTTTCAGCAGTCCAGATACTCCCAGGATTCTCCCTCACACCAGACGCAGCCAGGGGCGCATTCACCTTTGACCCTCAACCTTAAAGTCTTTCAGGGACAAAGTTGTGTCATGGACTGATGTGACAGacctattctttttttttttaatgtttgtttcacTGTCTCTCTTTGCCTTtcccctttctctctctaaaTGAATCACTTGGGCCTCCATCTGAGTACactgtgcatgttttttgagatttttgagCAGAcctcatcattttttttgtatgtacagatttttatttgttaatattgtgtACAATGGACAATTGTAAATGACTACGACTATTGATACAGGATGGCAATAATTATCTCATAGGATGCTACAGTTAATTTCTTTCAGTTACCAATGTAGTACATTAATAAGGTCTGATCTATgcaatgctgctttttttacacagtttgttgttttggtttttttgtttgtttttaaaacctcaatcaggggtgtcaaactgAGCTCCTGGAGAGCCCTGCTGGGTTGACTTCCAACTCCGCTCCAACACACATGCGCAGGGCTATAGTAAAGAGCGGTACTTAGTTTGCTAATAATGTGTACATCCATGTTTCTCCTGTGTTATCATCCTCTTCTACAAAGTGCTAATGCAGTATCGCattcaaaagcaataaaaaagttataagcctttcaaatgtattcaaaGTGTGTGCTATTgcataatacaatttattatacagttctctggaatacttgattctgactGGTTagtcatttgtttaaataaaaaaacttcatCCCCTAACACTAGCACTCTTCATTaattatctataaataaatcCTGCATCA

Function

symbol description
mtfr2 Predicted to be involved in aerobic respiration and mitochondrial fission. Predicted to be active in mitochondrion. Is expressed in several structures, including immature eye; nervous system; neural plate; pectoral fin musculature; and segmental plate. Orthologous to human MTFR2 (mitochondrial fission regulator 2).

NR:

description
mitochondrial fission regulator 2-like

GO:

id name namespace
GO:0005739 mitochondrion cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224531.1 True 2030 mRNA 0.46 9 10032538 10039425
XM_043224532.1 False 1972 mRNA 0.46 8 10032538 10037844
XM_043224534.1 False 1920 mRNA 0.46 8 10032537 10037756

Neighbor

gene id symbol gene type direction distance location
hbs1l hbs1l,LOC107723734,LOC107756395,LOC107701737 coding downstream 37963 9971502 ~ 9994574 (-)
aldh8a1 aldh8a1,LOC107723725,LOC107671839,LOC107756363,LOC107701738 coding downstream 64446 9962994 ~ 9968091 (-)
sgk1 sgk1,LOC107571333,LOC107723736,LOC107549055,LOC107756394,LOC107701736 coding downstream 91529 9920047 ~ 9941008 (-)
slc2a12 slc2a12,LOC107571322,LOC107701735,LOC107549056,LOC107671860 coding downstream 114882 9908788 ~ 9917655 (-)
tcf21 tcf21,LOC107571274,LOC107723756,LOC107756361,LOC107671849,LOC107701707,LOC107549058 coding downstream 147683 9883437 ~ 9884854 (-)
nlrp12l si:dkey-126g1.7,LOC107671883,LOC107723749,LOC107572771 coding upstream 2023 10041448 ~ 10049914 (-)
ormdl2 ormdl2,LOC107549034,LOC107701708,LOC107671901 coding upstream 20566 10059991 ~ 10062998 (-)
letmd1 letmd1,LOC107572784,LOC107723741,LOC107671881,LOC107701748,LOC107756404,LOC107549047 coding upstream 77639 10117064 ~ 10121368 (-)
rprm3 zgc:92658,LOC107701713,LOC107671842,LOC107723728,LOC107572774,LOC107549031,LOC107756367 coding upstream 91581 10131006 ~ 10132159 (-)
nr4a1 nr4a1,LOC107671891,LOC107723761,LOC107572787,LOC107756405,LOC107701750,LOC107549046 coding upstream 100725 10140150 ~ 10145452 (-)
G156264 NA non-coding downstream 15116 10016456 ~ 10017421 (-)
G156261 NA non-coding downstream 80506 9951143 ~ 9952031 (-)
LOC122328702 NA non-coding downstream 155369 9867920 ~ 9877168 (-)
G156245 NA non-coding downstream 201412 9782108 ~ 9831125 (-)
G156235 NA non-coding downstream 217043 9678261 ~ 9815494 (-)
G156278 NA non-coding upstream 13101 10052526 ~ 10053549 (-)
G156283 NA non-coding upstream 18586 10058011 ~ 10059303 (-)
G156313 NA non-coding upstream 73192 10112617 ~ 10116955 (-)
LOC122328389 NA non-coding upstream 252040 10291465 ~ 10294043 (-)
G156341 NA non-coding upstream 308716 10348141 ~ 10351881 (-)
zgc:153284 LOC107701733,LOC107571300,LOC107756391,LOC107549061,LOC107708783 other downstream 198855 9831809 ~ 9833682 (-)
hmgn3 hmgn3,LOC107756386,LOC107671890 other downstream 224168 9801785 ~ 9808369 (-)
ccdc187 LOC107708822,LOC107570908,LOC107718813,LOC107656553,LOC107695760,LOC107586514 other downstream 822573 9195310 ~ 9209964 (-)
ctnnbip1 ctnnbip1 other downstream 935235 9079532 ~ 9097302 (-)
sst6 LOC107681964,LOC107571825,LOC107695779,LOC107570713,LOC107681961 other downstream 1105786 8921564 ~ 8926751 (-)
ankrd52a ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831,LOC107723718 other upstream 179048 10218473 ~ 10385967 (-)
LOC122329224 NA other upstream 316516 10355941 ~ 10359786 (-)
LOC122328779 taf8,LOC107723763,LOC107756368,LOC107549030,LOC107671856,LOC107594013,LOC107701755 other upstream 324480 10363905 ~ 10367369 (-)
LOC122328798 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other upstream 636255 10675680 ~ 10678150 (-)
G156746 NA other upstream 1061319 11100744 ~ 11105223 (-)

Expression


Co-expression Network