si:dkey-126g1.9 (LOC107549036,LOC107723751,LOC107756364,LOC107572772)


Basic Information

Item Value
gene id si:dkey-126g1.9
gene name LOC107549036,LOC107723751,LOC107756364,LOC107572772
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10049940 ~ 10053458 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224548.1
ATGAAGCCCAAGTCCCTCTGCATCTCGCGGCTTGGCCTCTTCGAGGAAGGCGGATACAGGCGGCAGGTCGATACCGGCGCACCGGAGCAGAACTACGACCCTCCGGCGGAGAACAGGCCCCGAGATCGGCGCTTCTCTTTACTGCCAGAGAGATCTCCATACGAGCCTTTGGTGGAAGACGACAGCCAGCACAAACTAAAGGAGGAAAAGAaagccaaaaagaaagaaaagtataaaaaatacaggaagAACGTAGGAAAAGCCCTTCGCTACAGCTGGAAATGTCTGATGTTGGGTCTACAGAACTTCACTGTGGGATACTCCACCCCTTTTTCCGCCGCTGCTTCAATTGTCCCAGATTTCCATCCGGGAGGAGCCTGGGGTTGAGACAGTCTGGGGCCAGCATTTGTACTGTATCTCAATCTTTATGGACCATTTAATGCTGCGTGTCAGGTGCTTGTTAAAAAATGGTCAATACATCTGCCTCGGACAGCTTTGAGTGTCATGCTGtaaattgttaaattgttataaatgtaatttctttgaATTTGTGTTAAAGTGGAGTTTTCTTCTTGCATTACTGATTTACAGCTATAAGAAAGACAAGTAACTCTTTTTACTCTCAGatctatttgtatatattttgctttGATGGAAGGAATTCAGATGAATTTacgaaatatttttgtattatagaTCTAGGCTACAGTATTGTTGatactgtaattattttatgtatagcctcccattttctctttcactctTCAGCAAGGCGCAAACACGTGCTGCGTAGATGTGACGATGGCAAAGGCGAAAGTGATTTTGATTCTTAACTGGAAGAGATTGGTATGTTTATGCTCTGTAAAGTGAATCGAATGCCTTCTGAAATTGTATTTGATTTAGTGAATGTCATGGATAAAGGATAGGACATGTCTGACATAGGAAAGTGCTCTCAGAGAGGGAAGTAAGTGTTTTCAAATGGTAATTGGGGCAAGAGCCTTAAAGACAAAGGGATTAAGAGAAAGCACAACAGGAAAAGACTGTCTGGCCCGGGAGAGAAATGACTGTGCCATGGCTTGTTTAATAAGGTTAGTGTAGAAGATGCGTATCTGTCatgcttgtttaaaatgaatcacaacaaatgtgatgaaaaagtttaataaatgaaaattctgagTGGGa

Function

NR:

description
PREDICTED: uncharacterized protein C1orf115-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224548.1 True 1182 mRNA 0.42 2 10049940 10053458

Neighbor

gene id symbol gene type direction distance location
armc1l armc1l,LOC107723767,LOC107671895,LOC107571378,LOC107701743,LOC107756398,LOC107549053 coding upstream 8587 10037867 ~ 10041353 (+)
myb myb,LOC107701741,LOC107549054,LOC107671892,LOC107756348,LOC107571350 coding upstream 44294 9995797 ~ 10005646 (+)
tbpl1 tbpl1,LOC107571264,LOC107756392,LOC107671848,LOC107549057,LOC107723755,LOC107701734 coding upstream 141078 9904223 ~ 9908862 (+)
rps12 rps12,LOC107671850 coding upstream 212758 9834324 ~ 9837182 (+)
nemp1 LOC107756399,LOC107701744,LOC107549035,LOC107671884,LOC107572777 coding downstream 188 10053646 ~ 10057473 (+)
pan2 pan2,LOC107723747,LOC107756401 coding downstream 13995 10067453 ~ 10082559 (+)
trappc6b trappc6b,LOC107572779,LOC107756365,LOC107701709,LOC107549033 coding downstream 36969 10090427 ~ 10092452 (+)
tpx2 NA coding downstream 39310 10092768 ~ 10098638 (+)
mylk2 LOC107671840,LOC107756349,LOC107701711,LOC105903258,LOC107572773,LOC107549024 coding downstream 45607 10099065 ~ 10106692 (+)
G156142 NA non-coding upstream 55287 9994446 ~ 9994653 (+)
G156109 NA non-coding upstream 76406 9880762 ~ 9973534 (+)
G156108 sgk1 non-coding upstream 126715 9922141 ~ 9923225 (+)
LOC122328703 NA non-coding upstream 161561 9885045 ~ 9888379 (+)
G156098 NA non-coding upstream 234631 9813217 ~ 9815309 (+)
G156168 nr4a1,LOC107671891,LOC107723761,LOC107572787,LOC107756405,LOC107701750,LOC107549046 non-coding downstream 81397 10134855 ~ 10145461 (+)
G156182 grasp,LOC107671830,LOC107723769,LOC107594022,LOC107549045 non-coding downstream 108540 10161998 ~ 10163976 (+)
LOC122328771 NA non-coding downstream 201328 10254786 ~ 10256406 (+)
G156217 NA non-coding downstream 210532 10263990 ~ 10346054 (+)
G156169 NA non-coding downstream 333502 10386960 ~ 10387500 (+)
G156081 phip,LOC107656532,LOC107708770,LOC107549027 other upstream 280320 9683746 ~ 9769620 (+)
G155927 zgc:194189,LOC107570831,LOC107708788,LOC107681978,LOC107695725,LOC107586555,LOC107718823 other upstream 927547 9120884 ~ 9122393 (+)
lzic lzic,LOC107708836,LOC107718820,LOC107681991,LOC107570802,LOC107695771,LOC107586557 other upstream 948568 8941031 ~ 9101372 (+)
G155799 NA other upstream 1561299 8488086 ~ 8488641 (+)
LOC122328506 klhl14,LOC107677170,LOC107599684,LOC107554641,LOC107717384 other upstream 1716564 8321705 ~ 8333376 (+)
plagx plagx,LOC107723745,LOC107572778,LOC107756402,LOC107671865,LOC107549050,LOC107701746 other downstream 17322 10070780 ~ 10089818 (+)
LOC122328781 pifo other downstream 276393 10329851 ~ 10363818 (+)
LOC122328383 tbx15,tbx18,LOC107712261,LOC107708785,LOC107656541 other downstream 362205 10415663 ~ 10427162 (+)
LOC122328447 LOC107603155,LOC107707751,LOC107672009 other downstream 461521 10514979 ~ 10518751 (+)
LOC122329061 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other downstream 497639 10551097 ~ 10554720 (+)

Expression


Co-expression Network