rprm3 (zgc:92658,LOC107701713,LOC107671842,LOC107723728,LOC107572774,LOC107549031,LOC107756367)


Basic Information

Item Value
gene id rprm3
gene name zgc:92658,LOC107701713,LOC107671842,LOC107723728,LOC107572774,LOC107549031,LOC107756367
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10131006 ~ 10132159 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224550.1
CCCCTCCCTCAAAAGCCTCACGGTCACTGAGTTCAgaagtaagtgtgtgtgcgtccTCTCAGCGCGCGCTCCAAGGCACACTAAAATACCGGAGTGCTCTCCTCCAGACATCACCGAGACTGCCGCAGAGATGCTTGGATGATGCACTCCATCACATACAAAACGTAAACCAGACTATCTGCCACAAACAGACGCTTCGacgacagtttttttttttatcttttaaactATATCCATGGAAACGCACAAGTGAGCTGGGTAAACCCAGGACCTTCTAGAAGTTTTAAAACATCAGTACGCGTTAAACACACCGCAGAAAAGCAGACATGAATGTTTCACACGGACTACTGAACCGGACGATCTCTACAGCGAAGCAGCCTTTGGAAAGCGTTCGGGGATGCTGCAACTTCTCGGTTATCACGAGCGACGGGTTCGGTTCACCGATTCAGGACGAGCGCGATCAGTTCATCATGCGCTTGGTGCAGATCGCGGTTCTCTGCGTGCTGTCGCTGACGGTCATTTTCGGCATCTTTTTCCTCGGGTGCAACCTGCTCATCAAGTCCGAGAGTATGATAAATCTGCTGGTGGAGGACAGAAGACCTTCCAAAGACGCGGATATTATTATGATCGCCGCGTGAGTCGTGCCATAAATCTGACACAAACTGGCAATCTCTCCTGAACGACACCTGTTGGTATGATTCTCGTGCCGATGAAccgtatttttgtatatttcatcATTGGACCAGAACCTGTTAATGTCGCAAACAATGGAGACCGAACAAAgcattcaacttttttttaaacccagaAATCTTTCAAAACACATCTTCATGAAGACACTTGAAACGACAAGCGAAAGGCAACCGGacaaattcatttgaaattgagaatttgtcatttgttttgtatctttattgGATGAATTGATTCATGTGACTcgttgaaatgataaaaaaaaaaatcttaatgtgTTAAAGATTGTATGAACTTGCATGCAAATGGATTAAATGAAATCTAGAACTTTAAAAATACTGTCCAATTTTAGTTGACATTTTAGATTTCATTCTCAGTGAATGCATACATTATTGTATACTTATatcaataacaaaaataagatATATGACTACGCATCCTCTGCAGGCCAGCTGTAAAGG

Function

NR:

description
protein reprimo A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224550.1 True 1154 mRNA 0.43 1 10131006 10132159

Neighbor

gene id symbol gene type direction distance location
letmd1 letmd1,LOC107572784,LOC107723741,LOC107671881,LOC107701748,LOC107756404,LOC107549047 coding downstream 9638 10117064 ~ 10121368 (-)
ormdl2 ormdl2,LOC107549034,LOC107701708,LOC107671901 coding downstream 68008 10059991 ~ 10062998 (-)
nlrp12l si:dkey-126g1.7,LOC107671883,LOC107723749,LOC107572771 coding downstream 81092 10041448 ~ 10049914 (-)
mtfr2 mtfr2,LOC107723766,LOC107671894,LOC107571368,LOC107549052,LOC107701742 coding downstream 91581 10032537 ~ 10039425 (-)
hbs1l hbs1l,LOC107723734,LOC107756395,LOC107701737 coding downstream 136432 9971502 ~ 9994574 (-)
nr4a1 nr4a1,LOC107671891,LOC107723761,LOC107572787,LOC107756405,LOC107701750,LOC107549046 coding upstream 7991 10140150 ~ 10145452 (-)
tamalin grasp,LOC107723769,LOC107594022,LOC107549045,LOC107671830 coding upstream 30623 10162782 ~ 10176042 (-)
dgkaa dgkaa,dgka,LOC107549042,LOC107671885,LOC107701752,LOC107594021,LOC107756407 coding upstream 45027 10177186 ~ 10202807 (-)
rnf41 rnf41,LOC107723732,LOC107756409 coding upstream 71880 10204039 ~ 10212427 (-)
LOC122328770 pifo coding upstream 111769 10243928 ~ 10280539 (-)
G156313 NA non-coding downstream 14051 10112617 ~ 10116955 (-)
G156283 NA non-coding downstream 71703 10058011 ~ 10059303 (-)
G156278 NA non-coding downstream 77457 10052526 ~ 10053549 (-)
G156264 NA non-coding downstream 113585 10016456 ~ 10017421 (-)
G156261 NA non-coding downstream 178975 9951143 ~ 9952031 (-)
LOC122328389 NA non-coding upstream 159306 10291465 ~ 10294043 (-)
G156341 NA non-coding upstream 215982 10348141 ~ 10351881 (-)
G156364 NA non-coding upstream 254795 10386954 ~ 10388615 (-)
G156452 NA non-coding upstream 408740 10540899 ~ 10542887 (-)
G156459 NA non-coding upstream 535798 10667957 ~ 10675579 (-)
zgc:153284 LOC107701733,LOC107571300,LOC107756391,LOC107549061,LOC107708783 other downstream 297324 9831809 ~ 9833682 (-)
hmgn3 hmgn3,LOC107756386,LOC107671890 other downstream 322637 9801785 ~ 9808369 (-)
ccdc187 LOC107708822,LOC107570908,LOC107718813,LOC107656553,LOC107695760,LOC107586514 other downstream 921042 9195310 ~ 9209964 (-)
ctnnbip1 ctnnbip1 other downstream 1033704 9079532 ~ 9097302 (-)
sst6 LOC107681964,LOC107571825,LOC107695779,LOC107570713,LOC107681961 other downstream 1204255 8921564 ~ 8926751 (-)
ankrd52a ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831,LOC107723718 other upstream 86314 10218473 ~ 10385967 (-)
LOC122329224 NA other upstream 223782 10355941 ~ 10359786 (-)
LOC122328779 taf8,LOC107723763,LOC107756368,LOC107549030,LOC107671856,LOC107594013,LOC107701755 other upstream 231746 10363905 ~ 10367369 (-)
LOC122328798 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other upstream 543521 10675680 ~ 10678150 (-)
G156746 NA other upstream 968585 11100744 ~ 11105223 (-)

Expression


Co-expression Network