ada (ada,LOC107574722,LOC107737507,LOC107673052,LOC107716171,LOC107564650,LOC107695842)


Basic Information

Item Value
gene id ada
gene name ada,LOC107574722,LOC107737507,LOC107673052,LOC107716171,LOC107564650,LOC107695842
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14624253 ~ 14636325 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224565.1
GCCGTAAGCCCAGCCTCATGAAACGCACGATTAGAACAAGAAACGCAGCCTGAACCTCTCTAAAGCGCGAATAGAGCGCTTCCGACACGCTCGCGAGCTTCAGTATGCCGCGTCGCGTCGGTACTAGTGTACATGTGGCGTTACCGCGCTTCTAAAAAGCTTCTAATAGGATTCCGGTTTAATCTCTTCGCTTGGCGCAGATCAGGGGCGCTTGTCAGTTTAGTTTGCTCGGTTATTGTTGTCACTCGGTCGTGTTCAGCCGCGTTTAGTTGGCTTATTGCACGCCGACGTTGTAGAGGCGGGGTTCATCGCTCATATTATCTGTTCATAAGGCGTGTTCTTTGTCCGCGCCGGGGTCGGGGTGTATAATAGTTCCGCGCATGGGGGAAGCAGAAGTTCGCCGCTCGAGCTGACAGGTTCCGAAGAGCGCGTGTCCAAGTTGTATCGCGACAGATTTACACGTCGAGTGAAGACAATGGCAGAACAGAATGGAAAACCAGCCTTTGATAAACCTAAGATTGAACTACACGTGCATCTTGATGGTGCCATTCGAATAAAGACCATTGTAGAAGTTGCAAAGCGGCGGGGAATCACTCTACCTGCGATCGGCGAGGATGAAATGAGAAACCTGGTCATAATGCATAAGCCGGCCACACTCACAGAATTCCTTGGCAAGTTCAGTCACTACATGCATGCCATTGCAGGGGACAGGGAGGCCATCAAGAGAATAGCTTATGAGTTTGTAGAGACAAAGGCCAAAGAGGGAGTGATCTATGCTGAAGCCAGATACAGCCCTCATCTGCTTGCCAACAAGGGAGTGGAACCTCTTCCTTGGGATCAAAAACCAGGAGACATCACTCCTGATGATGTGGTGAGCCTGGTGAACCAGGGGTTCAATGAGGGAGAAAAGGCCTTCAAAACCAAAGTCAGGTCCATTCTGTGCTGCATGCGTCACATGCCAAATTGGTCTATGGACATAGTTGAGCTATGTAAAAAGTATCGTAAAGATGGAGTTGTGGCAATAGACCTAGCAGGGGATGAGTCTATGAACTGTGAGTCATACCCAGGACACAAGAGAGCATTTGAggaaGCCGTCAGAAGTGAAATTCACAGAACAGTGCATGCAGGAGAAGTGGGCCCTGCTAGTGTGGTGAAGGAGGCTGTGGAGGTTCTGAAAGCAGAACGCATTGGACATGGATACCACACGCTTGAAGATCAAGCCCTGTATAAACGACTGCTCCAACAGAACATGCATTTTGAGGTATGTCCTGTCTCTAGCAGAGTGACAGGAGCCTGTGACCCAGACTTCACTAAACATCCTCTCATCACATTAAAAAAGGACAACGCTAACTACTCCTTAAATACGGATGATCCTACCATCTTCAACTCCACCTTGAACTCAGACTACCAGGTGGTGCAGAAATACATGGATTTCACTGAAGAGGACTTCAAGAGACTGAATATAAATGCAGCCAAGTCCTGCTTTCTTCCTAAGACGGAGAAAAAGAAGCTTCTTGAACAACTCTATGAGGCTTATGGCATGCTGGAAAAAACTGGCTTTTGAGCTCAGTGCTATTATAAACACGTTTGCAGCGAGCAGAGCCTTTCAGGACATTTGCCTTCTCACACGATTGTGGCTCCTTATTCCTTAAAAACTGGAGAACTCATACGCGCATCTCCCAGtgaaattatttacacaaaacaaTAGACCACAGTCAACATcttgttcattaaaataattgttacacatgtaattcatatttcattaaCCACTATTATAGCATACTGGTTTTGACCAAATGCTGTTGCCTTTAATCTACATAAACAGTTTAACAAGCATTGTTATATCAAGTTATATCAATAGCCTAAACATGAAATATTGGtcttatttcatatttactcAAGTCTAAGTCACTATAATTTCCATCTTCTCAATATACGCACAGAACATGACCataatgaaatttttttatatgaagcaTGTTAAGCTGTATAATGTAAAAGGTGCTGTGAGAATGAAGTTAAATAATACCTCTACAATTTTACAATagcaatacaaaaaagaaaatgataaatcCAAAACATTATGCCAGAATATGATCTTATATCTGGTGCTTATCTAATGTATATTGTATACAAACCTTTAGGTAAgcgtttattattaaatatattaaaaggtTATTATTAGATGTTTGATGATGAAATGCTGTGCAAAACCCCTTTAAGTTTTGTCCTTCCTTTGTTCTAACGCCAGAGGGCATTTACCAAAAGACGGATCATATAACTCAGGTTTGAAGTTAATCAGCCTagtgaaaaataattacattttgtgtaaaaaaacaaaacaggaacaTATGGACTATATATATGCTGCGGGAAGGAAGGGACTGAGAGCTTGTCACTCTGTAAACGATCAATACAAATACTTTCGCATTTGAA

Function

symbol description
ada Enables adenosine deaminase activity. Predicted to be involved in T cell activation; negative regulation of adenosine receptor signaling pathway; and nucleobase-containing small molecule metabolic process. Predicted to act upstream of or within nucleotide metabolic process and purine ribonucleoside monophosphate biosynthetic process. Predicted to be located in several cellular components, including cell junction; cytoplasmic vesicle lumen; and lysosome. Predicted to be active in cytosol and external side of plasma membrane. Is expressed in several structures, including digestive system; gill; heart; kidney; and muscle. Human ortholog(s) of this gene implicated in adenosine deaminase deficiency; asthma; and severe combined immunodeficiency. Orthologous to human ADA (adenosine deaminase).

NR:

description
PREDICTED: adenosine deaminase isoform X1

GO:

id name namespace
GO:0042110 T cell activation biological_process
GO:0060169 negative regulation of adenosine receptor signaling pathway biological_process
GO:0046103 inosine biosynthetic process biological_process
GO:0006154 adenosine catabolic process biological_process
GO:0043103 hypoxanthine salvage biological_process
GO:0009117 nucleotide metabolic process biological_process
GO:0009168 purine ribonucleoside monophosphate biosynthetic process biological_process
GO:0005829 cytosol cellular_component
GO:0009897 external side of plasma membrane cellular_component
GO:0060205 cytoplasmic vesicle lumen cellular_component
GO:0030054 cell junction cellular_component
GO:0004000 adenosine deaminase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K01488 add, ADA; adenosine deaminase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224565.1 True 2439 mRNA 0.43 11 14624253 14636325

Neighbor

gene id symbol gene type direction distance location
LOC122328465 LOC107737694,LOC107673066,LOC107568406,LOC107668342,LOC107564659,LOC107716177 coding downstream 54595 14564464 ~ 14569658 (-)
senp1 LOC107673065,LOC107568405,LOC107737512,LOC107716163 coding downstream 60453 14554814 ~ 14563800 (-)
lrp1ab lrp1,lrp1ab,LOC107673053,LOC107593902,LOC108425568 coding downstream 99617 14428972 ~ 14524636 (-)
idh3g idh3g,LOC107737522,LOC107591068,LOC107673097,LOC107716150,LOC107593912,LOC108425561 coding downstream 330687 14286961 ~ 14293566 (-)
avpr2aa avpr2aa,LOC107591070,LOC107737524,LOC107687451,LOC107716149,LOC107673055,LOC108436342 coding downstream 351793 14257850 ~ 14272460 (-)
gdi1 gdi1,LOC107564645,LOC107737502,LOC107673075,LOC107716167,LOC107574690 coding upstream 35952 14672277 ~ 14679231 (-)
LOC122329128 LOC107737536,LOC107673093,LOC107716130,LOC107591120,LOC107687434 coding upstream 81420 14717745 ~ 14724225 (-)
LOC122328919 kcnn3,LOC107723559,LOC107657645,LOC107699550,LOC107714686,LOC107595057,LOC108280396 coding upstream 135766 14772091 ~ 14808777 (-)
LOC122328901 LOC107549209,LOC107689901,LOC107738870,LOC107681562 coding upstream 269511 14905836 ~ 14933006 (-)
LOC122328916 iqch coding upstream 413041 15049366 ~ 15073882 (-)
G157906 NA non-coding downstream 163236 14326384 ~ 14461017 (-)
G157928 NA non-coding downstream 180802 14383738 ~ 14443451 (-)
G157920 NA non-coding downstream 256624 14366559 ~ 14367629 (-)
G157915 LOC107673099,LOC107737518 non-coding downstream 265223 14357040 ~ 14359030 (-)
G157901 NA non-coding downstream 280983 14302872 ~ 14343270 (-)
G157966 mef2d non-coding upstream 15099 14651424 ~ 14729662 (-)
LOC122328920 NA non-coding upstream 193939 14830264 ~ 14830849 (-)
G157999 itga8,LOC107689880,LOC107717802,LOC107681583 non-coding upstream 200036 14836361 ~ 14845678 (-)
LOC122328921 NA non-coding upstream 551823 15188148 ~ 15189638 (-)
G158014 NA non-coding upstream 566041 15202366 ~ 15203950 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other downstream 34631 14570347 ~ 14589622 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other downstream 293469 14326966 ~ 14330784 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other downstream 391202 14222809 ~ 14233051 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other downstream 1341926 13280256 ~ 13282327 (-)
G157367 NA other downstream 1406845 13141078 ~ 13217408 (-)
LOC122328902 LOC107737500,LOC107673074,LOC107695835,LOC107564653,LOC108275744 other upstream 48565 14684890 ~ 15301682 (-)
LOC122328913 zgc:162898,c4h15orf61,LOC107738714,LOC107686305,LOC107583911,LOC107718314,LOC107596966,LOC107672207 other upstream 410827 15047152 ~ 15048344 (-)
magi3a magi3,magi3a,LOC107695739,LOC107564661 other upstream 711092 15347417 ~ 15474390 (-)
LOC122329227 NA other upstream 985617 15621942 ~ 15717250 (-)
G158231 NA other upstream 1371781 16008106 ~ 16008915 (-)

Expression


Co-expression Network