LOC122328711 (LOC107707759,LOC107559486,LOC107747485,LOC107690852,LOC107558232,LOC100536777,LOC107681385,LOC108440950)


Basic Information

Item Value
gene id LOC122328711
gene name LOC107707759,LOC107559486,LOC107747485,LOC107690852,LOC107558232,LOC100536777,LOC107681385,LOC108440950
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 7815091 ~ 7821793 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224568.1
CGCATGACGTCAGTGCGTCAGCTGGTTTATGTTTACATCGCGTCAATTTTTTCGCAGTCAAGTTAGACCTTATTGCGCCCGGAGCCAAAAACACGACGTGCGCGTTGATGTGATCGATGGACATTGCTGGTTTGGACGAGACAACCGCTGAGGTCCGAGATCACACGACAGCGATAGGCGCGCATCGGGACCGGTCTTAGAAGCTCTTCTGTTTTGGTCATGGGTGGAGCCGTGAGCGCAGGCGAGGACAACGACGAGCTGATTGACAACCTGAAGGAGGCCCATTACATCCGCTCGGATCTGGTGGAGAGGGCCTTCCGAGCCATTGACAGAGCAGACTATTACCTGGAGGAGTACCGTGACAGTGCGTATAAAGACCTGGCCTGGAGACATGGAAACCTCCATCTGTCTGCTCCGTGCATCTACTCTGAGGTGATGGAGGCCCTGGATCTGCAGCCTGGCCTGTCTTTTCTCAATCTGGGCAGCGGGACGGGTTATCTCAGCACCATGGTGGGCCTTATACTGGGTCCGTTTGGTGTGAATCACGGCGTGGAGCTGCACGCAGATGTGGTTGATTATGCATATCAGAAACTTGACCACTTTATCAAAACCAGCGACAGCTTTGACAAGTTTGAGTTCTGTGAGCCAACCTTTGTGGTGGGAAACTGTCTGGAGATCCCCCCGGAGAGCCGGCAGTATGACAGGGTGTACTGTGGAGCAGGAGTTCAGAAAGAGTACGAGAACTACATGAAGAACCTGCTAAAGGTTGGCGGGATCTTAGTTCTCCCCCTGGAGGAGAAGTTAACCAAGATCACCCGCACAGGTCAGAGCTCCTGGGAGACCAAGAAAATCATCGCTGTGACTTTTGCCCCCCTCGTCCAGCCCAAACAGAACGTCAATGGCAGACCTAGGAGCGTTCCTTTACCCATTTTTGAGGTGCGGACACTACAGGACCTGTGTCGGATTGCTATTCGCCACACTCTGCGGCAGCCCATAGCTATGGGAGAAGGACGCACAAAGAGACGCGTGTCTTTCCCAGGGGCCCGGGCCATGCACCGCTACGGGCCCCGCTTCGAACGCCGCCGCTTCTGCCGGCGTTTCTACCGCCAGTGCGTCAACTCCGTGGTTCTCCACGACTCCATGATTCCCACAGCCATGGACGACTGCAACTACCCCGGAGGagtggaagaggaagaagaggaagtggaggaggaagaggaaagagGTTGTCGGCGAGTGAGAGAAGACCTGCCCGAGGAGGACGAGGACGAATGCGGCGGCACCGAagaggacaaaaacaaaagcggCTGCGCTCGTGCAGAGCCTCCCGTTAATATTCTGAGGGAGAAGATTCTAAGACTACCGTTACCTGAACCCCTGAAGATGTATCTGCTGTATTACAGGGAGAAATGAGACGTGGAGACAGATAATACGTGCAGCGTAGCGTTAAGATGATTAGACATGAAGAAAAGCctttctcttcttcctcctcctcctcctcaacTGGATTAGCATGACAATTAAGTCCTCAATTAATGACATCATGATATCCATATCCCTTTGAGAAGCAAAGCTCCTTGATTCGGGATGTACAGAGACGGGACTGAAGGACTGAGCTCCTTTTCCCGAATAATCAACGTCGCCTGAGCTCTTgcagctctttttttaattcattttcccTTCGATTGAGATGATCAAAGTGTACGATACGATACATTGTCCCTGTGGGAAATGCTTGTCGCcgtgagcttttttttttttttttagagtagCGTGACTTTAGGAAGTGGCGTAGTTTGACATGGCGgatgaatttttgttttatagcttTATGGTGCGGTTACGTTTACCCTAGCTTGGTGGAATCTATTCATCGGCGCGACTGGGAGTTTGACGCAAGGAGGTAGAAGTTCCTCATGCAGATGTCTCTCGTGCCCGCGGGGTTCGAGAGAATTCCCCACAACTGCTCGGTTTGATGTGAGTGGTGCTTCACGCGATTGGCGTTTCGTGGGAGTACGGAAAAGTACCTCTTGCCCGTTGGTAACGCAAAATTGCCATGTTGACTTGTTGAAAAAAACGCTTGgtttgaaaatgacttttgatGTTGGACCTTCTTTGCCTGCGAAATTTCGCTAATATGACTGCACCCCAAAGTCGGCCCTCCACTGTTGGAACTCTTTTCCTTGCCTCTACTGTGTTCTCCAAAATACTAAATAACGTCTGCATGTGTACTGCCGTAATGCACCCGCATTTTGTCAATATTGGAGTTTGTGGTGGTATGATGCATTTTATCATGTTAATTCGATTACCGTTGCCGGTTGACGCCGCATTGTAATTTTATTCCACACTCGTATGAAGGCAGGCATCGTTTCTGCACCCCACACTACAGAATCATTGTCATATTGCAAGgtttacaaattatattgtaAAGGTTGTGTCAAaacgaagagaaaaaaaaaataattaaaaagtctaTTTATTGGTAATCACCAAAAATTCAAGGTATATAAAGCACTTTGGTGTTTTTCACAAATTCAAATAGTTGCGTTCAAAATCTTTGGCCCTACTCAGGAATACTTTAGAAAaacattagttattttttttaaactccttCATACAATAAAAAGACCAAAATGTTAGTACCTTTCTAtttttttgaccaaaaatgttgaaaataatctGCTTTTTATATAATCGCACTACATCTGTACAGGAAGACTATTCTAAGCATACAATGATTGGATCTGGCAATTCTATGATCCCGGGCTCGATTTCTACACATTTCATCAGTCCAGGAGTCCATTTTCTTTAGTTCTCCTCGAGACCAATGCTTAGATAGCCCAAAAACAATCCAGGATATTATCATGAGAAAAGTCTTTACTCTTCTGACGTACAAGCATATCTACCAAGTTTTGCTTGAAACAATTGTGTGCTTGTCACAGAACCTTCAATAAAGTTTGAGTTTGCACACTGGA
>XM_043224569.1
CGTCAGTGCGTCAGCTGGTTTATGTTTACATCGCGTCAATTTTTTCGCAGTCAAGTTAGACCTTATTGCGCCCGGAGCCAAAAACACGACGTGCGCGTTGATGTGATCGATGGACATTGCTGGTTTGGACGAGACAACCGCTGAGACAGCGATAGGCGCGCATCGGGACCGGTCTTAGAAGCTCTTCTGTTTTGGTCATGGGTGGAGCCGTGAGCGCAGGCGAGGACAACGACGAGCTGATTGACAACCTGAAGGAGGCCCATTACATCCGCTCGGATCTGGTGGAGAGGGCCTTCCGAGCCATTGACAGAGCAGACTATTACCTGGAGGAGTACCGTGACAGTGCGTATAAAGACCTGGCCTGGAGACATGGAAACCTCCATCTGTCTGCTCCGTGCATCTACTCTGAGGTGATGGAGGCCCTGGATCTGCAGCCTGGCCTGTCTTTTCTCAATCTGGGCAGCGGGACGGGTTATCTCAGCACCATGGTGGGCCTTATACTGGGTCCGTTTGGTGTGAATCACGGCGTGGAGCTGCACGCAGATGTGGTTGATTATGCATATCAGAAACTTGACCACTTTATCAAAACCAGCGACAGCTTTGACAAGTTTGAGTTCTGTGAGCCAACCTTTGTGGTGGGAAACTGTCTGGAGATCCCCCCGGAGAGCCGGCAGTATGACAGGGTGTACTGTGGAGCAGGAGTTCAGAAAGAGTACGAGAACTACATGAAGAACCTGCTAAAGGTTGGCGGGATCTTAGTTCTCCCCCTGGAGGAGAAGTTAACCAAGATCACCCGCACAGGTCAGAGCTCCTGGGAGACCAAGAAAATCATCGCTGTGACTTTTGCCCCCCTCGTCCAGCCCAAACAGAACGTCAATGGCAGACCTAGGAGCGTTCCTTTACCCATTTTTGAGGTGCGGACACTACAGGACCTGTGTCGGATTGCTATTCGCCACACTCTGCGGCAGCCCATAGCTATGGGAGAAGGACGCACAAAGAGACGCGTGTCTTTCCCAGGGGCCCGGGCCATGCACCGCTACGGGCCCCGCTTCGAACGCCGCCGCTTCTGCCGGCGTTTCTACCGCCAGTGCGTCAACTCCGTGGTTCTCCACGACTCCATGATTCCCACAGCCATGGACGACTGCAACTACCCCGGAGGagtggaagaggaagaagaggaagtggaggaggaagaggaaagagGTTGTCGGCGAGTGAGAGAAGACCTGCCCGAGGAGGACGAGGACGAATGCGGCGGCACCGAagaggacaaaaacaaaagcggCTGCGCTCGTGCAGAGCCTCCCGTTAATATTCTGAGGGAGAAGATTCTAAGACTACCGTTACCTGAACCCCTGAAGATGTATCTGCTGTATTACAGGGAGAAATGAGACGTGGAGACAGATAATACGTGCAGCGTAGCGTTAAGATGATTAGACATGAAGAAAAGCctttctcttcttcctcctcctcctcctcaacTGGATTAGCATGACAATTAAGTCCTCAATTAATGACATCATGATATCCATATCCCTTTGAGAAGCAAAGCTCCTTGATTCGGGATGTACAGAGACGGGACTGAAGGACTGAGCTCCTTTTCCCGAATAATCAACGTCGCCTGAGCTCTTgcagctctttttttaattcattttcccTTCGATTGAGATGATCAAAGTGTACGATACGATACATTGTCCCTGTGGGAAATGCTTGTCGCcgtgagcttttttttttttttttagagtagCGTGACTTTAGGAAGTGGCGTAGTTTGACATGGCGgatgaatttttgttttatagcttTATGGTGCGGTTACGTTTACCCTAGCTTGGTGGAATCTATTCATCGGCGCGACTGGGAGTTTGACGCAAGGAGGTAGAAGTTCCTCATGCAGATGTCTCTCGTGCCCGCGGGGTTCGAGAGAATTCCCCACAACTGCTCGGTTTGATGTGAGTGGTGCTTCACGCGATTGGCGTTTCGTGGGAGTACGGAAAAGTACCTCTTGCCCGTTGGTAACGCAAAATTGCCATGTTGACTTGTTGAAAAAAACGCTTGgtttgaaaatgacttttgatGTTGGACCTTCTTTGCCTGCGAAATTTCGCTAATATGACTGCACCCCAAAGTCGGCCCTCCACTGTTGGAACTCTTTTCCTTGCCTCTACTGTGTTCTCCAAAATACTAAATAACGTCTGCATGTGTACTGCCGTAATGCACCCGCATTTTGTCAATATTGGAGTTTGTGGTGGTATGATGCATTTTATCATGTTAATTCGATTACCGTTGCCGGTTGACGCCGCATTGTAATTTTATTCCACACTCGTATGAAGGCAGGCATCGTTTCTGCACCCCACACTACAGAATCATTGTCATATTGCAAGgtttacaaattatattgtaAAGGTTGTGTCAAaacgaagagaaaaaaaaaataattaaaaagtctaTTTATTGGTAATCACCAAAAATTCAAGGTATATAAAGCACTTTGGTGTTTTTCACAAATTCAAATAGTTGCGTTCAAAATCTTTGGCCCTACTCAGGAATACTTTAGAAAaacattagttattttttttaaactccttCATACAATAAAAAGACCAAAATGTTAGTACCTTTCTAtttttttgaccaaaaatgttgaaaataatctGCTTTTTATATAATCGCACTACATCTGTACAGGAAGACTATTCTAAGCATACAATGATTGGATCTGGCAATTCTATGATCCCGGGCTCGATTTCTACACATTTCATCAGTCCAGGAGTCCATTTTCTTTAGTTCTCCTCGAGACCAATGCTTAGATAGCCCAAAAACAATCCAGGATATTATCATGAGAAAAGTCTTTACTCTTCTGACGTACAAGCATATCTACCAAGTTTTGCTTGAAACAATTGTGTGCTTGTCACAGAACCTTCAATAAAGTTTGAGTTTGCACACTGGA

Function

NR:

description
PREDICTED: protein-L-isoaspartate O-methyltransferase domain-containing protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224568.1 True 2975 mRNA 0.47 6 7815091 7821793
XM_043224569.1 False 2953 mRNA 0.47 6 7815098 7821793

Neighbor

gene id symbol gene type direction distance location
LOC122328639 LOC107707759,LOC107559486,LOC107747485,LOC107690852,LOC107558232,LOC100536777,LOC107681385,LOC108440950 coding upstream 41119 7766223 ~ 7773972 (+)
myt1b myt1b,LOC107690850,LOC107747484,LOC107681384,LOC107559484,LOC107558231 coding upstream 50039 7684304 ~ 7765052 (+)
oprl1 oprl1,LOC107727003,LOC107681404,LOC107666560,LOC107705672,LOC106572940 coding upstream 327555 7459498 ~ 7487536 (+)
soga1 LOC107727023,LOC107705691,LOC107681366,LOC107666465 coding upstream 1042105 6730816 ~ 6772986 (+)
lama5 lama5,LOC107681381,LOC107727012,LOC107666435,LOC107705651 coding upstream 1106424 6640878 ~ 6708667 (+)
plagl2 plagl2,LOC107690855,LOC107559482,LOC107707758,LOC107681868,LOC107747490,LOC107558237 coding downstream 62503 7884296 ~ 7920041 (+)
slco4a1 slco4a1,LOC107603147,LOC107681874,LOC107559480,LOC107657069,LOC107707756 coding downstream 293148 8114941 ~ 8132951 (+)
ntsr1 ntsr1,LOC107559468,LOC107747990,LOC107707740,LOC107671946,LOC107657007,LOC107603109 coding downstream 334400 8156193 ~ 8175519 (+)
LOC122329211 ccdc178,LOC107555255,LOC107667113,LOC107599731 coding downstream 459433 8281226 ~ 8307764 (+)
LOC122328648 abcd4,LOC107667197,LOC107677172 coding downstream 513161 8334954 ~ 8341779 (+)
G155619 NA non-coding upstream 413902 7400990 ~ 7401189 (+)
G155509 NA non-coding upstream 975930 6836963 ~ 6839161 (+)
G155457 NA non-coding upstream 993041 6797111 ~ 6822050 (+)
LOC122328804 NA non-coding upstream 1086881 6725037 ~ 6728210 (+)
LOC122328803 NA non-coding upstream 1091227 6720370 ~ 6723864 (+)
LOC122328944 NA non-coding downstream 44987 7866780 ~ 7868674 (+)
G155651 NA non-coding downstream 98410 7920203 ~ 7921525 (+)
G155645 NA non-coding downstream 100229 7922022 ~ 7923577 (+)
G155655 tm9sf4,LOC107681873 non-coding downstream 107940 7929733 ~ 7932056 (+)
G155660 NA non-coding downstream 116813 7938606 ~ 7939756 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other upstream 509557 7298360 ~ 7305534 (+)
G155561 NA other upstream 576172 7225994 ~ 7238919 (+)
si:ch211-220i18.4 LOC107551506,LOC107666586,LOC107559855,LOC107681367,LOC107705652,LOC108275527,LOC107100285 other upstream 1216559 6592602 ~ 6598532 (+)
LOC122328459 g6pd,LOC107723128,LOC107697003,LOC107594489 other upstream 2979607 4817365 ~ 4835484 (+)
ube2t ube2t,LOC107746510,LOC107707375,LOC107673550 other upstream 4118069 3694652 ~ 3697022 (+)
LOC122328506 klhl14,LOC107677170,LOC107599684,LOC107554641,LOC107717384 other downstream 499912 8321705 ~ 8333376 (+)
G155799 NA other downstream 666293 8488086 ~ 8488641 (+)
lzic lzic,LOC107708836,LOC107718820,LOC107681991,LOC107570802,LOC107695771,LOC107586557 other downstream 1119238 8941031 ~ 9101372 (+)
G155927 zgc:194189,LOC107570831,LOC107708788,LOC107681978,LOC107695725,LOC107586555,LOC107718823 other downstream 1299091 9120884 ~ 9122393 (+)
G156081 phip,LOC107656532,LOC107708770,LOC107549027 other downstream 1861953 9683746 ~ 9769620 (+)

Expression


Co-expression Network