zgc:153867 (zgc:153867,LOC107586536,LOC107570608,LOC105897346)


Basic Information

Item Value
gene id zgc:153867
gene name zgc:153867,LOC107586536,LOC107570608,LOC105897346
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 16353722 ~ 16360814 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224643.1
TCCACTGCATGAATTCATCCTAGATTACTCCTGCTACCTGCTCTCTTCTCCCGCTCattcttctctcttttcctaTAATCAGAGGACACACATGCAATTCATCTGACAGAGCTTTTTCTTCGGTGTTTTGCAAAGCAGTGGACAGGGAGGAAGGACACATTTCAAGGTCTAAAGATGGCACCGAAACGAGAACCGTCAATTAAAAAGTCTCCATCCGGGGGAACGTTACCGAGGCATGGACCACCGTTTCCTTGCCCTGCCACGGCGCCTTCACCTCCAAAACCAGCTCCTGAGTTGAAACCGCGGATGCTGCGCCCCTCTGATTCCCCCTTTGACCCCAGCACATTAGAGTCTGACTTCAGCGAGGACCAGATTCTTGAATTCAAAGAAGCCTTCCTCCTGTTCGACCGGACGGGAGATGGGAAGATCACCTACAGCCAGTGTGGGGATGTGATGCGTGCCTTGGGCCAAAATCCCGTCAATGCAGAGGTGCTCAAAGTCCTGGGCAACCCAAAGGCAGAAGAAATGAACCATAAAATGCTGGACTTCGAGCAGTTCCTGCCCATGCTCCAGGCCATCGCTAAGAACAAAGACCAGGGCACGTTCGAGGACTTCGTGGAGGGGCTTAGAGTATTTGACAAGGAAGGCAACGGCACAGTCATGGGCGCTGAGCTCCGCCATGTTCTCACCACACTGGGAGAGAAGATGACCGAAGAGGAGGTAGAAACGCTTCTAGCTGGACACGAAGATGCTAACGGTTGCATCAATTACGAAGAACTCGTCCGCATGGTCATGAGCGGTTGAAGATAAAGACCACAACTCATTCGTTTGTCTTCTTTTCTGTGTAATaatttctttatgtattttttttttcttcctattCATTCCGTCACCTTCATTTGCTTAATGGCTGCAGTCCTTCGCTTGTGTTTGCACTCATTTGGGTATTATTATTAGAAGTGCCTTTATCTTCTTTAAGTTCCCATTTGACTCCCCGAGAGGTCCACCTTCTGTCCTGTGGTATTCAAACCATATAGCGATATGAAAAAGATCTCTTGCGTGCTGACTGGTCTGCAATAAAACCTCTCGATACAGCACATTAGCAGTGTGTATGCAATATCCAGTGTATCCTCAGGCATCTCTGCTGGACCGTGCTGTAGTAGAAATGTCGTGTCTggccagacttttatttttggcctTTTCATAATAAGTTAACTTTTttcaaattgagaaattatgGATCAgaaatgcaataacattttaattaatttggaATGTTCTCACTGTccaataaagtacattttaaacagaaa
>XM_043224644.1
ACATCCACTGCATGAATTCATCCTAGATTACTCCTGCTACCTGCTCTCTTCTCCCGCTCattcttctctcttttcctaTAATCAGAGGACACACATGCAATTCATCTGACAGAGCTTTTTCTTCGGTGTTTTGCAAAGCAGTGGACAGGGAGGAAGGACACATTTCAAGGTCTAAAGATGGCACCGAAACGAGAACCGTCAATTAAAAAGTCTCCATCCGGGGGAACGTTACCGAGGCATGGACCACCGTTTCCTTGCCCTGCCACGGCGCCTTCACCTCCAAAACCAGCTCCTGAGTTGAAACCGCGGATGCTGCGCCCCTCTGATTCCCCCTTTGACCCCAGCACATTAGAGTCTGACTTCAGCGAGGACCAGATTCTTGAATTCAAAGAAGCCTTCCTCCTGTTCGACCGGACGGGAGATGGGAAGATCACCTACAGCCAGTGTGGGGATGTGATGCGTGCCTTGGGCCAAAATCCCGTCAATGCAGAGGTGCTCAAAGTCCTGGGCAACCCAAAGGCAGAAGAAATGAACCATAAAATGCTGGACTTCGAGCAGTTCCTGCCCATGCTCCAGGCCATCGCTAAGAACAAAGACCAGGGCACGTTCGAGGACTTCGTGGAGGGGCTTAGAGTATTTGACAAGGAAGGCAACGGCACAGTCATGGGCGCTGAGCTCCGCCATGTTCTCACCACACTGGGAGAGAAGATGACCGAAGAGGAGGTAGAAACGCTTCTAGCTGGACACGAAGATGCTAACGGTTGCATCAATTACGAAGCCTTCGTTCGCCACATCATGTCTGGCTGAGAGATGTCTCGGAACTCGTCCGCATGGTCATGAGCGGTTGAAGATAAAGACCACAACTCATTCGTTTGTCTTCTTTTCTGTGTAATaatttctttatgtattttttttttcttcctattCATTCCGTCACCTTCATTTGCTTAATGGCTGCAGTCCTTCGCTTGTGTTTGCACTCATTTGGGTATTATTATTAGAAGTGCCTTTATCTTCTTTAAGTTCCCATTTGACTCCCCGAGAGGTCCACCTTCTGTCCTGTGGTATTCAAACCATATAGCGATATGAAAAAGATCTCTTGCGTGCTGACTGGTCTGCAATAAAACCTCTCGATACAGCACATTAGCAGTGTGTATGCAATATCCAGTGTATCCTCAGGCATCTCTGCTGGACCGTGCTGTAGTAGAAATGTCGTGTCTggccagacttttatttttggcctTTTCATAATAAGTTAACTTTTttcaaattgagaaattatgGATCAgaaatgcaataacattttaattaatttggaATGTTCTCACTGTccaataaagtacattttaaacagaaa
>XM_043224645.1
ATCCACTGCATGAATTCATCCTAGATTACTCCTGCTACCTGCTCTCTTCTCCCGCTCattcttctctcttttcctaTAATCAGAGGACACACATGCAATTCATCTGACAGAGCTTTTTCTTCGGTGTTTTGCAAAGCAGTGGACAGGGAGGAAGGACACATTTCAAGGTCTAAAGATGGCACCGAAACGAGAACCGTCAATTAAAAAGTCTCCATCCGGGGGAACGTTACCGAGGCATGGACCACCGTTTCCTTGCCCTGCCACGGCGCCTTCACCTCCAAAACCAGCTCCTGAGTTGAAACCGCGGATGCTGCGCCCCTCTGATTCCCCCTTTGACCCCAGCACATTAGAGATTGAGTTTAACTTGGAACAAATACACGAATTCAAAGAAGCCTTCCTCCTGTTCGACCGGACGGGAGATGGGAAGATCACCTACAGCCAGTGTGGGGATGTGATGCGTGCCTTGGGCCAAAATCCCGTCAATGCAGAGGTGCTCAAAGTCCTGGGCAACCCAAAGGCAGAAGAAATGAACCATAAAATGCTGGACTTCGAGCAGTTCCTGCCCATGCTCCAGGCCATCGCTAAGAACAAAGACCAGGGCACGTTCGAGGACTTCGTGGAGGGGCTTAGAGTATTTGACAAGGAAGGCAACGGCACAGTCATGGGCGCTGAGCTCCGCCATGTTCTCACCACACTGGGAGAGAAGATGACCGAAGAGGAGGTAGAAACGCTTCTAGCTGGACACGAAGATGCTAACGGTTGCATCAATTACGAAGAACTCGTCCGCATGGTCATGAGCGGTTGAAGATAAAGACCACAACTCATTCGTTTGTCTTCTTTTCTGTGTAATaatttctttatgtattttttttttcttcctattCATTCCGTCACCTTCATTTGCTTAATGGCTGCAGTCCTTCGCTTGTGTTTGCACTCATTTGGGTATTATTATTAGAAGTGCCTTTATCTTCTTTAAGTTCCCATTTGACTCCCCGAGAGGTCCACCTTCTGTCCTGTGGTATTCAAACCATATAGCGATATGAAAAAGATCTCTTGCGTGCTGACTGGTCTGCAATAAAACCTCTCGATACAGCACATTAGCAGTGTGTATGCAATATCCAGTGTATCCTCAGGCATCTCTGCTGGACCGTGCTGTAGTAGAAATGTCGTGTCTggccagacttttatttttggcctTTTCATAATAAGTTAACTTTTttcaaattgagaaattatgGATCAgaaatgcaataacattttaattaatttggaATGTTCTCACTGTccaataaagtacattttaaacagaaa
>XM_043224646.1
CACATCCACTGCATGAATTCATCCTAGATTACTCCTGCTACCTGCTCTCTTCTCCCGCTCattcttctctcttttcctaTAATCAGAGGACACACATGCAATTCATCTGACAGAGCTTTTTCTTCGGTGTTTTGCAAAGCAGTGGACAGGGAGGAAGGACACATTTCAAGGTCTAAAGATGGCACCGAAACGAGAACCGTCAATTAAAAAGTCTCCATCCGGGGGAACGTTACCGAGGCATGGACCACCGTTTCCTTGCCCTGCCACGGCGCCTTCACCTCCAAAACCAGCTCCTGAGTTGAAACCGCGGATGCTGCGCCCCTCTGATTCCCCCTTTGACCCCAGCACATTAGAGATTGAGTTTAACTTGGAACAAATACACGAATTCAAAGAAGCCTTCCTCCTGTTCGACCGGACGGGAGATGGGAAGATCACCTACAGCCAGTGTGGGGATGTGATGCGTGCCTTGGGCCAAAATCCCGTCAATGCAGAGGTGCTCAAAGTCCTGGGCAACCCAAAGGCAGAAGAAATGAACCATAAAATGCTGGACTTCGAGCAGTTCCTGCCCATGCTCCAGGCCATCGCTAAGAACAAAGACCAGGGCACGTTCGAGGACTTCGTGGAGGGGCTTAGAGTATTTGACAAGGAAGGCAACGGCACAGTCATGGGCGCTGAGCTCCGCCATGTTCTCACCACACTGGGAGAGAAGATGACCGAAGAGGAGGTAGAAACGCTTCTAGCTGGACACGAAGATGCTAACGGTTGCATCAATTACGAAGCCTTCGTTCGCCACATCATGTCTGGCTGAGAGATGTCTCGGAACTCGTCCGCATGGTCATGAGCGGTTGAAGATAAAGACCACAACTCATTCGTTTGTCTTCTTTTCTGTGTAATaatttctttatgtattttttttttcttcctattCATTCCGTCACCTTCATTTGCTTAATGGCTGCAGTCCTTCGCTTGTGTTTGCACTCATTTGGGTATTATTATTAGAAGTGCCTTTATCTTCTTTAAGTTCCCATTTGACTCCCCGAGAGGTCCACCTTCTGTCCTGTGGTATTCAAACCATATAGCGATATGAAAAAGATCTCTTGCGTGCTGACTGGTCTGCAATAAAACCTCTCGATACAGCACATTAGCAGTGTGTATGCAATATCCAGTGTATCCTCAGGCATCTCTGCTGGACCGTGCTGTAGTAGAAATGTCGTGTCTggccagacttttatttttggcctTTTCATAATAAGTTAACTTTTttcaaattgagaaattatgGATCAgaaatgcaataacattttaattaatttggaATGTTCTCACTGTccaataaagtacattttaaacagaaa
>XM_043224647.1
ACTCAGAGAGATGATTCGTTCACGAATCGGATATCGCTACCCTTCATAACTGAGCAGAGCTAGCGCGAGTCTTCTCACACTCCCGCCGCAACACACAACCGGAAAACAAGCCACTGCAGATATGTCTGACTTCAGCGAGGACCAGATTCTTGAATTCAAAGAAGCCTTCCTCCTGTTCGACCGGACGGGAGATGGGAAGATCACCTACAGCCAGTGTGGGGATGTGATGCGTGCCTTGGGCCAAAATCCCGTCAATGCAGAGGTGCTCAAAGTCCTGGGCAACCCAAAGGCAGAAGAAATGAACCATAAAATGCTGGACTTCGAGCAGTTCCTGCCCATGCTCCAGGCCATCGCTAAGAACAAAGACCAGGGCACGTTCGAGGACTTCGTGGAGGGGCTTAGAGTATTTGACAAGGAAGGCAACGGCACAGTCATGGGCGCTGAGCTCCGCCATGTTCTCACCACACTGGGAGAGAAGATGACCGAAGAGGAGGTAGAAACGCTTCTAGCTGGACACGAAGATGCTAACGGTTGCATCAATTACGAAGAACTCGTCCGCATGGTCATGAGCGGTTGAAGATAAAGACCACAACTCATTCGTTTGTCTTCTTTTCTGTGTAATaatttctttatgtattttttttttcttcctattCATTCCGTCACCTTCATTTGCTTAATGGCTGCAGTCCTTCGCTTGTGTTTGCACTCATTTGGGTATTATTATTAGAAGTGCCTTTATCTTCTTTAAGTTCCCATTTGACTCCCCGAGAGGTCCACCTTCTGTCCTGTGGTATTCAAACCATATAGCGATATGAAAAAGATCTCTTGCGTGCTGACTGGTCTGCAATAAAACCTCTCGATACAGCACATTAGCAGTGTGTATGCAATATCCAGTGTATCCTCAGGCATCTCTGCTGGACCGTGCTGTAGTAGAAATGTCGTGTCTggccagacttttatttttggcctTTTCATAATAAGTTAACTTTTttcaaattgagaaattatgGATCAgaaatgcaataacattttaattaatttggaATGTTCTCACTGTccaataaagtacattttaaacagaaa

Function

symbol description
zgc:153867 Predicted to enable calcium ion binding activity. Orthologous to human MYL6 (myosin light chain 6) and MYL6B (myosin light chain 6B).

NR:

description
PREDICTED: myosin light polypeptide 6-like isoform X3

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K12751 MYL6; myosin light chain 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224643.1 False 1313 mRNA 0.46 6 16353726 16360814
XM_043224644.1 False 1357 mRNA 0.46 7 16353723 16360814
XM_043224645.1 False 1314 mRNA 0.46 6 16353725 16360814
XM_043224646.1 True 1358 mRNA 0.46 7 16353722 16360814
XM_043224647.1 False 1086 mRNA 0.45 6 16355322 16360814

Neighbor

gene id symbol gene type direction distance location
birc5b birc5b,LOC107571769,LOC107708796,LOC107695794,LOC107716091,LOC107586566,LOC107681933 coding upstream 18109 16334501 ~ 16335613 (+)
c1galt1a c1galt1a,LOC107708852,LOC107571731,LOC107586568,LOC107695751,LOC107716090 coding upstream 112798 16235766 ~ 16240924 (+)
slc26a10 slc26a10,LOC107708797,LOC107681935,LOC107716215,LOC107586569,LOC107695728,LOC107570587 coding upstream 131676 16213956 ~ 16222046 (+)
arhgef25a arhgef25a,LOC107570569,LOC107708856,LOC107681953,LOC107716212,LOC107695729 coding upstream 165197 16130101 ~ 16188525 (+)
kmt2d kmt2d,LOC107681934,LOC107695802,LOC107716211 coding upstream 270720 16050565 ~ 16083002 (+)
huwe1 huwe1,LOC107716223,LOC107586534 coding downstream 43098 16403912 ~ 16439274 (+)
l1cama LOC107708848,LOC107681982,LOC107570628,LOC107716224,LOC107586533,LOC107695787 coding downstream 84307 16445121 ~ 16490079 (+)
smc1a smc1a,LOC107716226,LOC107695786,LOC107586531 coding downstream 134142 16494956 ~ 16505598 (+)
srm srm,LOC107716095,LOC107708792,LOC107586563,LOC107681959,LOC107695748,LOC107570652 coding downstream 145108 16505922 ~ 16510329 (+)
LOC122328557 sst3,cort,LOC107586562,LOC107695747,LOC107716096 coding downstream 152293 16513107 ~ 16514904 (+)
G158117 NA non-coding upstream 387958 15964752 ~ 15965764 (+)
G158115 NA non-coding upstream 404301 15896647 ~ 15949421 (+)
G158113 NA non-coding upstream 415851 15934939 ~ 15937871 (+)
G158110 NA non-coding upstream 471830 15880663 ~ 15881892 (+)
G158074 scn8aa,LOC107695818,LOC107563626 non-coding upstream 525789 15818461 ~ 15827933 (+)
G158423 NA non-coding downstream 178722 16539536 ~ 16539832 (+)
LOC122328367 NA non-coding downstream 185027 16545841 ~ 16573057 (+)
G158430 LOC107660256 non-coding downstream 188425 16549239 ~ 16549606 (+)
G158434 NA non-coding downstream 194603 16555417 ~ 16555642 (+)
G158437 NA non-coding downstream 248011 16608825 ~ 16611041 (+)
G158152 rps26,RPS26,rps26l,LOC107563646 other upstream 270193 15983670 ~ 16083529 (+)
G158162 dnajc22,LOC107708801,LOC107716089,LOC107563648,LOC107571715,LOC107695753 other upstream 330328 16022199 ~ 16023394 (+)
G157620 NA other upstream 1049172 15300704 ~ 15304550 (+)
G157656 megf11,LOC107583869,LOC107672222,LOC107596974,LOC107686294 other upstream 1357577 14992350 ~ 14996145 (+)
LOC122328907 mef2d,LOC107741762,LOC107549240,LOC107717782,LOC107597970,LOC107663114,LOC107689865 other upstream 1595505 14725910 ~ 14758217 (+)
LOC122328571 kmt2d,LOC107681934,LOC107716211,LOC107695802,LOC107563643 other downstream 221156 16581970 ~ 16607408 (+)
G158446 atf7a,LOC107563644,LOC107570410,LOC107745462,LOC107681998 other downstream 260384 16621198 ~ 16664314 (+)
LOC122328551 atf7b,atf7a,LOC107711055,LOC107585125,LOC107740570,LOC107667392,LOC107673513,LOC107582698,LOC107681998,LOC107716199,LOC107745462,LOC107570410,LOC107563644,LOC107695816 other downstream 274632 16635446 ~ 16669648 (+)
G158486 NA other downstream 370532 16731346 ~ 16732884 (+)
G158524 NA other downstream 721391 17082205 ~ 17082655 (+)

Expression


Co-expression Network