si:ch211-10d23.5 (LOC107675163,LOC107736956,LOC107564805,LOC107555797,LOC107684905,LOC107714265)


Basic Information

Item Value
gene id si:ch211-10d23.5
gene name LOC107675163,LOC107736956,LOC107564805,LOC107555797,LOC107684905,LOC107714265
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 1065562 ~ 1070204 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224653.1
TGACTAGTGGCAACCTGCGTGTGCGTCAGGTCTGAGTAGTAGGAGGGGCTGGGTGAAAAAAACGCCTCCAATATTTGGAATTTGGACTGCAGTACCTCGGTGTCggtcctacatacagcacctttaaatgTCTGAATGTCTTCACCTAAATACGCGTCTCTTcgtgttttactgtgtttgtgAGAAGCATAGCCGCAGTTGATCAATGCCCGTAAAATCTTCAGAGAATCTGCATCGAAATATCTGCTTGTGGGAGgcTGTGGGAGTGAATAGTGATGACTGGAGAGAgagtgtttatgtttgttgaTGAAGAGGAGCTCTTCAGCGCGATGAAGGACCTCGACTGTCTCTACTGTAGGATTCCAGTCACTGCATCTAAACATCACCTCAGAAAGAAACATCTCAGATTCGCTGTATATTATAAAGACTCTGGCATTGGGAAGTTTTCTATCCCCTGTTATTGCTCTGACGGAGGCCACGGCAGGAGCCACTGGCATTGCCCAATGTGCTCAAAAATATTGCACAGGACACAGAATTACAGAATCCATATTACCAACCATGGTGTTGAGATGACAGACAAGTCCTCAGTTGAGCTACGGCCTACAGCAGTCCTTTTAGAAAGCCTACGAACAGACCGCGAAGACGAGACCAAACCGGGCAACAAGGCAGCGTGCCAAAAGTGTGGGATCCTCTTTACCACGACATCGAATTTGAGACGGCATGAAAGACTGCAGCACGGCCACGACCAGCAGCCCATTTTGTGCATAGATGCCAAAAATGCAATCTACGTCACGCCCAAATACCTGCACGGGCCGAGAGTGCCCATTCACATCCGCAAATCCTTCACCTCGCAGGTTCTGCTGTGTGAGCTGGAGGAGTGCTGGGATTTCATGAAAGCGCAGGCCCAGAGCGGGAATCCCGGGAAGGAATGCCGTCACCTGGTCAGGACGAATCACGCAAGGCACTACGTTCCCCCTCCTCCTCTGTGCGTTAACTCTCTGGACGAGATGGGCCACAAGCAGCTCCTGTCCGCATCCGAGAAGCTCCAGTGCCGGGAGATGAGCTCCAGGGCGTGCATTCGGGGGGTGGATTGTGTCTACCCTATCTTTTGGGGTGAGCGCGAACTTTCGGAGAGGTGCGTCTTCTTTTCTGTGTACACCGACCTCGAGGACAAATGGTGTCAGTTCGGGAGGACCCGCGTCTCGTTCGACACCGAGTCTGGCGGCTGGAGGTGTCTGTGCAAGCGCAAAAGAAGCCGCTGCGTCCACAAGTGTTTATCCGCGTGGTGGTTGTTTCAGGAGCGTCCTGAACTCTTGCAGAATGCCCCAGATGTCCATGCGGAATCGGCCGATGCGCTCGAGGAAGCGGTCATGGATGCAGAGGACGTGGTTTAAATAACCACCTCCGCCAGACTCGACATCCGTCAGAACTTTACTTTCAATTTCTGTGTCTTCACTCAATAAAAACACTGGACCTAACCTTTATTTTAGGCTTGTAATTTGTTTGCAAACACTCATGTGCTGTCGTTTGCAGTTAACCAtagttatgtaatcagattgctttttttaaagtaacagtgaagatgtaatgaatttttttaacattttagtctGTTCCCGTGTTGAGAGTTGTGTTGCCTTCCTTCAGCCCGAGgcttattcatttcatttggtGTGACAAGGCCATATAACACTTTTTGTGGGGAAAACCCAGCATAGGTGACAAATACTAATGTGACGTATTACAGTCTTACAAATAAAGGTGCTAAAACTCTT
>XM_043224654.1
GTTCCGGCCCGGAATGCAGCCCGCCCACTTCCAGTTTACCCAATCGTGTTTCAGAAcgccgggttgccagttggcggGAAACAGcgtttttcatttcagtcatgaAAGCCGGCAAACGAAAGAGGCCTGAGCGGGAAATACAACTGTCTGTATGTTCTAAAAAGCCTCGACATCAATTGCGATGCGTTTTTGAGAGATGGAAACAGCTTAAATCAGCTGTATCATCGTCAAGAAACGAATGCTGAGTTGGCCCATCTTCTCATTGACGGCCGCAGTTGATCAATGCCCGTAAAATCTTCAGAGAATCTGCATCGAAATATCTGCTTGTGGGAGgcTGTGGGAGTGAATAGTGATGACTGGAGAGAgagtgtttatgtttgttgaTGAAGAGGAGCTCTTCAGCGCGATGAAGGACCTCGACTGTCTCTACTGTAGGATTCCAGTCACTGCATCTAAACATCACCTCAGAAAGAAACATCTCAGATTCGCTGTATATTATAAAGACTCTGGCATTGGGAAGTTTTCTATCCCCTGTTATTGCTCTGACGGAGGCCACGGCAGGAGCCACTGGCATTGCCCAATGTGCTCAAAAATATTGCACAGGACACAGAATTACAGAATCCATATTACCAACCATGGTGTTGAGATGACAGACAAGTCCTCAGTTGAGCTACGGCCTACAGCAGTCCTTTTAGAAAGCCTACGAACAGACCGCGAAGACGAGACCAAACCGGGCAACAAGGCAGCGTGCCAAAAGTGTGGGATCCTCTTTACCACGACATCGAATTTGAGACGGCATGAAAGACTGCAGCACGGCCACGACCAGCAGCCCATTTTGTGCATAGATGCCAAAAATGCAATCTACGTCACGCCCAAATACCTGCACGGGCCGAGAGTGCCCATTCACATCCGCAAATCCTTCACCTCGCAGGTTCTGCTGTGTGAGCTGGAGGAGTGCTGGGATTTCATGAAAGCGCAGGCCCAGAGCGGGAATCCCGGGAAGGAATGCCGTCACCTGGTCAGGACGAATCACGCAAGGCACTACGTTCCCCCTCCTCCTCTGTGCGTTAACTCTCTGGACGAGATGGGCCACAAGCAGCTCCTGTCCGCATCCGAGAAGCTCCAGTGCCGGGAGATGAGCTCCAGGGCGTGCATTCGGGGGGTGGATTGTGTCTACCCTATCTTTTGGGGTGAGCGCGAACTTTCGGAGAGGTGCGTCTTCTTTTCTGTGTACACCGACCTCGAGGACAAATGGTGTCAGTTCGGGAGGACCCGCGTCTCGTTCGACACCGAGTCTGGCGGCTGGAGGTGTCTGTGCAAGCGCAAAAGAAGCCGCTGCGTCCACAAGTGTTTATCCGCGTGGTGGTTGTTTCAGGAGCGTCCTGAACTCTTGCAGAATGCCCCAGATGTCCATGCGGAATCGGCCGATGCGCTCGAGGAAGCGGTCATGGATGCAGAGGACGTGGTTTAAATAACCACCTCCGCCAGACTCGACATCCGTCAGAACTTTACTTTCAATTTCTGTGTCTTCACTCAATAAAAACACTGGACCTAACCTTTATTTTAGGCTTGTAATTTGTTTGCAAACACTCATGTGCTGTCGTTTGCAGTTAACCAtagttatgtaatcagattgctttttttaaagtaacagtgaagatgtaatgaatttttttaacattttagtctGTTCCCGTGTTGAGAGTTGTGTTGCCTTCCTTCAGCCCGAGgcttattcatttcatttggtGTGACAAGGCCATATAACACTTTTTGTGGGGAAAACCCAGCATAGGTGACAAATACTAATGTGACGTATTACAGTCTTACAAATAAAGGTGCTAAAACTCTT
>XM_043224655.1
GACTAGTGACTAGTGGCAACCTGCGTGTGCGTCAGGTCTGAGTAGTAGGAGGGGCTGGGTGAAAAAAACGCCTCCAATATTTGGAATTTGGACTGCAGTACCTCGGTGTCggtcctacatacagcacctttaaatgTCTGAATGTCTTCACCTAAATACGCGTCTCTTcgtgttttactgtgtttgtgAGAAGCATAGCCGCAGTTGATCAATGCCCGTAAAATCTTCAGAGAATCTGCATCGAAATATCTGCTTGTGGGAGgcTGTGGGAGTGAATAGTGATGACTGGAGAGAgagtgtttatgtttgttgaTGAAGAGGAGCTCTTCAGCGCGATGAAGGACCTCGACTGTCTCTACTGTAGGATTCCAGTCACTGCATCTAAACATCACCTCAGAAAGAAACATCTCAGATTCGCTGTATATTATAAAGACTCTGGCATTGGTGTTGAGATGACAGACAAGTCCTCAGTTGAGCTACGGCCTACAGCAGTCCTTTTAGAAAGCCTACGAACAGACCGCGAAGACGAGACCAAACCGGGCAACAAGGCAGCGTGCCAAAAGTGTGGGATCCTCTTTACCACGACATCGAATTTGAGACGGCATGAAAGACTGCAGCACGGCCACGACCAGCAGCCCATTTTGTGCATAGATGCCAAAAATGCAATCTACGTCACGCCCAAATACCTGCACGGGCCGAGAGTGCCCATTCACATCCGCAAATCCTTCACCTCGCAGGTTCTGCTGTGTGAGCTGGAGGAGTGCTGGGATTTCATGAAAGCGCAGGCCCAGAGCGGGAATCCCGGGAAGGAATGCCGTCACCTGGTCAGGACGAATCACGCAAGGCACTACGTTCCCCCTCCTCCTCTGTGCGTTAACTCTCTGGACGAGATGGGCCACAAGCAGCTCCTGTCCGCATCCGAGAAGCTCCAGTGCCGGGAGATGAGCTCCAGGGCGTGCATTCGGGGGGTGGATTGTGTCTACCCTATCTTTTGGGGTGAGCGCGAACTTTCGGAGAGGTGCGTCTTCTTTTCTGTGTACACCGACCTCGAGGACAAATGGTGTCAGTTCGGGAGGACCCGCGTCTCGTTCGACACCGAGTCTGGCGGCTGGAGGTGTCTGTGCAAGCGCAAAAGAAGCCGCTGCGTCCACAAGTGTTTATCCGCGTGGTGGTTGTTTCAGGAGCGTCCTGAACTCTTGCAGAATGCCCCAGATGTCCATGCGGAATCGGCCGATGCGCTCGAGGAAGCGGTCATGGATGCAGAGGACGTGGTTTAAATAACCACCTCCGCCAGACTCGACATCCGTCAGAACTTTACTTTCAATTTCTGTGTCTTCACTCAATAAAAACACTGGACCTAACCTTTATTTTAGGCTTGTAATTTGTTTGCAAACACTCATGTGCTGTCGTTTGCAGTTAACCAtagttatgtaatcagattgctttttttaaagtaacagtgaagatgtaatgaatttttttaacattttagtctGTTCCCGTGTTGAGAGTTGTGTTGCCTTCCTTCAGCCCGAGgcttattcatttcatttggtGTGACAAGGCCATATAACACTTTTTGTGGGGAAAACCCAGCATAGGTGACAAATACTAATGTGACGTATTACAGTCTTACAAATAAAGGTGCTAAAACTCTT
>XM_043224656.1
GACTAGTGACTAGTGGCAACCTGCGTGTGCGTCAGGTCTGAGTAGTAGGAGGGGCTGGGTGAAAAAAACGCCTCCAATATTTGGAATTTGGACTGCAGTACCTCGGTGTCggtcctacatacagcacctttaaatgTCTGAATGTCTTCACCTAAATACGCGTCTCTTcgtgttttactgtgtttgtgAGAAGCATAGCCGCAGTTGATCAATGCCCGTAAAATCTTCAGAGAATCTGCATCGAAATATCTGCTTGTGGGAGgcTGTGGGAGTGAATAGTGATGACTGGAGAGAgagtgtttatgtttgttgaTGAAGAGGAGCTCTTCAGCGCGATGAAGGACCTCGACTGTCTCTACTGTAGGATTCCAGTCACTGCATCTAAACATCACCTCAGAAAGAAACATCTCAGATTCGCTGTATATTATAAAGACTCTGGCATTGTTGAGCTACGGCCTACAGCAGTCCTTTTAGAAAGCCTACGAACAGACCGCGAAGACGAGACCAAACCGGGCAACAAGGCAGCGTGCCAAAAGTGTGGGATCCTCTTTACCACGACATCGAATTTGAGACGGCATGAAAGACTGCAGCACGGCCACGACCAGCAGCCCATTTTGTGCATAGATGCCAAAAATGCAATCTACGTCACGCCCAAATACCTGCACGGGCCGAGAGTGCCCATTCACATCCGCAAATCCTTCACCTCGCAGGTTCTGCTGTGTGAGCTGGAGGAGTGCTGGGATTTCATGAAAGCGCAGGCCCAGAGCGGGAATCCCGGGAAGGAATGCCGTCACCTGGTCAGGACGAATCACGCAAGGCACTACGTTCCCCCTCCTCCTCTGTGCGTTAACTCTCTGGACGAGATGGGCCACAAGCAGCTCCTGTCCGCATCCGAGAAGCTCCAGTGCCGGGAGATGAGCTCCAGGGCGTGCATTCGGGGGGTGGATTGTGTCTACCCTATCTTTTGGGGTGAGCGCGAACTTTCGGAGAGGTGCGTCTTCTTTTCTGTGTACACCGACCTCGAGGACAAATGGTGTCAGTTCGGGAGGACCCGCGTCTCGTTCGACACCGAGTCTGGCGGCTGGAGGTGTCTGTGCAAGCGCAAAAGAAGCCGCTGCGTCCACAAGTGTTTATCCGCGTGGTGGTTGTTTCAGGAGCGTCCTGAACTCTTGCAGAATGCCCCAGATGTCCATGCGGAATCGGCCGATGCGCTCGAGGAAGCGGTCATGGATGCAGAGGACGTGGTTTAAATAACCACCTCCGCCAGACTCGACATCCGTCAGAACTTTACTTTCAATTTCTGTGTCTTCACTCAATAAAAACACTGGACCTAACCTTTATTTTAGGCTTGTAATTTGTTTGCAAACACTCATGTGCTGTCGTTTGCAGTTAACCAtagttatgtaatcagattgctttttttaaagtaacagtgaagatgtaatgaatttttttaacattttagtctGTTCCCGTGTTGAGAGTTGTGTTGCCTTCCTTCAGCCCGAGgcttattcatttcatttggtGTGACAAGGCCATATAACACTTTTTGTGGGGAAAACCCAGCATAGGTGACAAATACTAATGTGACGTATTACAGTCTTACAAATAAAGGTGCTAAAACTCTT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107675163

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224653.1 False 1775 mRNA 0.49 7 1065562 1069847
XM_043224654.1 True 1852 mRNA 0.49 7 1065562 1070204
XM_043224655.1 False 1658 mRNA 0.49 6 1065562 1069853
XM_043224656.1 False 1631 mRNA 0.49 5 1065562 1069853

Neighbor

gene id symbol gene type direction distance location
sgk2a sgk2a,LOC107684892,LOC107713751,LOC107555799,LOC107736955,LOC107675170 coding downstream 14090 1044820 ~ 1051472 (-)
mybl2a NA coding downstream 20927 1038921 ~ 1044635 (-)
adtrp1 zgc:112175,LOC107684890,LOC107713766,LOC107555804 coding downstream 28294 1032492 ~ 1037268 (-)
ptpdc1b LOC107736953,LOC107564794,LOC107684888,LOC107555790,LOC107713765 coding downstream 33211 1024657 ~ 1032351 (-)
trnam-cau_118 NA coding downstream 45719 1019772 ~ 1019843 (-)
srsf6a srsf6a,LOC108276344,LOC107714268 coding upstream 554 1070758 ~ 1075667 (-)
arl6ip5b arl6ip5b,arl6ip5,LOC107684895,LOC107656678,LOC107736957,LOC107564791,LOC107555805,LOC102786473 coding upstream 7604 1077808 ~ 1081745 (-)
zgc:113278 zgc:113278,LOC107714267,LOC107555798,LOC107736961,LOC107656677,LOC107684897,LOC108427771,LOC105906438,LOC107564801 coding upstream 16988 1087192 ~ 1095438 (-)
b4galt5 b4galt5,LOC107736963,LOC107684873,LOC107656676,LOC107566184,LOC107725076 coding upstream 94819 1165023 ~ 1184666 (-)
LOC122329156 nup210,LOC107675171,LOC107684885,LOC107555788,LOC107564796,LOC107736952 coding upstream 211917 1282121 ~ 1344566 (-)
LOC122328476 NA non-coding downstream 101985 960274 ~ 963577 (-)
G153893 cnbp non-coding downstream 165796 841719 ~ 899766 (-)
G153911 NA non-coding downstream 289512 770513 ~ 776050 (-)
G153760 NA non-coding downstream 382451 679034 ~ 683111 (-)
LOC122328559 NA non-coding downstream 481071 583143 ~ 584491 (-)
G153966 NA non-coding upstream 135275 1205479 ~ 1206602 (-)
G153967 NA non-coding upstream 136496 1206700 ~ 1207587 (-)
G153984 LOC107727750,LOC107691341,LOC107566873 non-coding upstream 319158 1389362 ~ 1393135 (-)
LOC122328606 NA non-coding upstream 349653 1419857 ~ 1420454 (-)
LOC122328609 NA non-coding upstream 523408 1593612 ~ 1594209 (-)
l3mbtl1 l3mbtl1,LOC107736954,LOC107564793,LOC107684891,LOC107675169 other downstream 788 1053377 ~ 1064774 (-)
vgll4a LOC107675174,LOC107736947,LOC107713758,LOC107684880,LOC107555803,LOC107574679 other downstream 183378 865477 ~ 882184 (-)
ndnl2 ndnl2,LOC107736943,LOC107568481,LOC107714263,LOC107660884 other downstream 279683 779085 ~ 785879 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other upstream 437494 1507698 ~ 1512329 (-)
LOC122328833 LOC107669693 other upstream 1032506 2102710 ~ 2116883 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other upstream 1699278 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other upstream 1717092 2787296 ~ 2798533 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other upstream 1799414 2869618 ~ 2874758 (-)

Expression


Co-expression Network