bcl2l1 (bcl2l1,LOC107560925,LOC107737630,LOC107671991,LOC107741328,LOC107657020,LOC107576469)


Basic Information

Item Value
gene id bcl2l1
gene name bcl2l1,LOC107560925,LOC107737630,LOC107671991,LOC107741328,LOC107657020,LOC107576469
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11446999 ~ 11464910 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224667.1
GGGAGGTCTGCTTTAAAGAGAAATATCCAGAGCTCGCTCGTTTAGTACACGCGCGCACTATTATTACTTTGATCTGCCGCAGTTTCTATTTGATACTGTCGCTTAATCTATAACTAACGTTCACATACGCTGTCTGGAGCCGTTCGCTGGGTTGGTTTAATCTAGGAGGGAGCTGACTGTGTTATGGGTATGAGCCATTGCACCATCCCTGAGCGTCGGCAGAAGCCTGAGAAGGACGCAAGGGTGTGCACTGTGTTCTGAGGACGAGCGAGTGGATATCCAGACATCGGAGAACGACGAGAAACGACGTGAATTATGTCTTACTATAACCGAGAACTGGtggtatattttattaaatataaactctCACAGAGGAACTACCCCTTCAATCACATTGAATTTATAGAAGACATAAATCGGACTGATGCGGCGGAAGGGAACGATGAGGAGGCGGCAGGAACGACGACCCTCGTTAATGGCTCCCTGAACGGAACAAGTACTGGTTCCGCTGGGACCCCACCAAGGTCCCCCGCTTCAACCCCCCAGCGTCAGACAAACGGGACTGGGGGTCTGGACGCGGTAAAGGAGGCGCTTCGCGATTCTGCCAACGAGTTTGAGCTTCGTTATTCCCAAGCGTTCAACGACCTGTCCTCGCAGCTCCACATCACACCTGCCACGGCGTACCAGAGCTTCGAGAGCGTGATGGATGAGGTGTTTCGCGACGGCGTCAACTGGGGCCGCATCGTGGGGCTGTTTGCCTTTGGAGGGGCTCTCTGTGTTGAGTGCGTGGAGAAGGAGATGAGTCCGCTAGTGGGAAGCATTGCAGATTGGATGATCGTCTACCTAGATAATAAAATTCAGCCCTGGATCCAGAGCCAAGGAGGATGGgaaCGCTTCGCAGAGATTTTTGGAAAGGATGCAGCAGCAGAGAGCAGAAAATCGCAAGAAAGCTTCAAGAAGTGGTTGCTGGCGGGAATGACCTTGCTCACAGGTGTCGTGGTTGGGTCACTCATAGCACAGAAACGCCTGTGAGGATAAGGATAACTGAAGATCCAAATACACCCACTGCTTCACTTAGACCTCCTGCTAACATGAAGGaacttcaaaaatacatttgtttccGATTTATTTGTTTCCCTTTTATTGCCAAGAAATTTCATGTTTACATCCCACACCCCACCGTGTACTGTTGACTGAGTGGAGCGCGTCTGTGATGTGATGTCACATGATCCAGACTGCATTGAGGGGGCTTTGCTTTTTAGCTGACTAAGATCAAGCTAGCCTACGTCTCCTTAAACCCTGTTtaacaaaatgagaaaatgacTATAAAAAGAGTCTAggaaaaaagacttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacgaaagttTGACCAAACCTTCATTCTCTGtgtctgtaattattattttttgttgttctaaataattattttcagctCTATTATCAGTCTTTTTAAGTATCCTTATTATACTCTCGTTTTCAAAGAGACTGACGAAACTGACAAGGatacaaacattttatcttTGAATCTAATTTAAGGTCATTTTTTTGACTCCTGAGTTAATGACCCGATGACAGAGAAGAAGTTGAATCCAAACTGAATCGGCAGGATTCAGTTATTAAATCAGCACTGACGTTTCTGAGGAAAGTTGTTGCTGTCTGGAGTGCCAGATACCACCTTTAGGGCCCCGGCGCTACATTTGAGGGCCTGCTTCCTCTGTGATCTCTCTATCATTAGAGGACAGTGTGAAGAACAGATGAAacatgtttgcgtgtgtgttttctccaaaatattgttctgttctgttctttttttctttttcttttttttttttcccccatgcaCATCTGAGGGTTAAATGTTTGATTACCTGCACGGACAGGTTTGAAATCATCTGGAGCATCTAAATTAAAGGACCAACAGTTATGagaaatttgttttgttgtgaaagaAAGTTCTGTATGTTCATTGCAGTTTgatgtttgatttattaaacCTAACTTCAGCTTCGGATGAAAATCTTTATACCTTTTGAGATTGTTGTAACTAGAGATAGAGGAGACGCAGATACACAAGACGTGATGAGGTCACTCCTGATGTACGTGTGGCTACCTTTTACTGTATACACAGATAATGTAACAGAAAACAGCAGAAAGACATTAGATTAAACCATATTGCCACAAGA
>XM_043224668.1
CATATCCTATCACAGAGAGGGGAGGTCTGCTTTAAAGAGAAATATCCAGAGCTCGCTCGTTTAGTACACGCGCGCACTATTATTACTTTGATCTGCCGCAGTTTCTATTTGATACTGTCGCTTAATCTATAACTAACGTTCACATACGCTGTCTGGAGCCGTTCGCTGGGTTGGTTTAATCTAGGAGGGAGCTGACTGTGTTATGGGTATGAGCCATTGCACCATCCCTGAGCGTCGGCAGAAGCCTGAGAAGGACGCAAGGGTGTGCACTGTGTTCTGAGGACGAGCGAGTGGATATCCAGACATCGGAGAACGACGAGAAACGACGTGAATTATGTCTTACTATAACCGAGAACTGGtggtatattttattaaatataaactctCACAGAGGAACTACCCCTTCAATCACATTGAATTTATAGAAGACATAAATCGGACTGATGCGGCGGAAGGGAACGATGAGGAGGCGGCAGGAACGACGACCCTCGTTAATGGCTCCCTGAACGGAACAAGTACTGGTTCCGCTGGGACCCCACCAAGGTCCCCCGCTTCAACCCCCCAGCGTCAGACAAACGGGACTGGGGGTCTGGACGCGGTAAAGGAGGCGCTTCGCGATTCTGCCAACGAGTTTGAGCTTCGTTATTCCCAAGCGTTCAACGACCTGTCCTCGCAGCTCCACATCACACCTGCCACGGCGTACCAGAGCTTCGAGAGCGTGATGGATGAGGTGTTTCGCGACGGCGTCAACTGGGGCCGCATCGTGGGGCTGTTTGCCTTTGGAGGGGCTCTCTGTGTTGAGTGCGTGGAGAAGGAGATGAGTCCGCTAGTGGGAAGCATTGCAGATTGGATGATCGTCTACCTAGATAATAAAATTCAGCCCTGGATCCAGAGCCAAGGAGGATGGGCACAAACATGGCCACATTGCCAGGCAAGCACAAAGGACACCTCCCACAGACAGAGATCTTCCAGATatacaatctaaaataaaacagaaCGCTTCGCAGAGATTTTTGGAAAGGATGCAGCAGCAGAGAGCAGAAAATCGCAAGAAAGCTTCAAGAAGTGGTTGCTGGCGGGAATGACCTTGCTCACAGGTGTCGTGGTTGGGTCACTCATAGCACAGAAACG

Function

symbol description
bcl2l1 Enables cysteine-type endopeptidase inhibitor activity involved in apoptotic process. Acts upstream of or within negative regulation of apoptotic process; thyroid gland development; and tissue homeostasis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrial outer membrane. Is expressed in several structures, including blood island; endocrine system; extension; immune system; and nervous system. Human ortholog(s) of this gene implicated in breast cancer; carcinoma (multiple); leukemia (multiple); and pancreatic cancer. Orthologous to human BCL2L1 (BCL2 like 1).

NR:

description
PREDICTED: bcl-2-like protein 1

GO:

id name namespace
GO:2001243 negative regulation of intrinsic apoptotic signaling pathway biological_process
GO:0043066 negative regulation of apoptotic process biological_process
GO:0097192 extrinsic apoptotic signaling pathway in absence of ligand biological_process
GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process biological_process
GO:0001894 tissue homeostasis biological_process
GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage biological_process
GO:0030878 thyroid gland development biological_process
GO:0005741 mitochondrial outer membrane cellular_component
GO:0043027 cysteine-type endopeptidase inhibitor activity involved in apoptotic process molecular_function
GO:0042803 protein homodimerization activity molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K04570 BCL2L1, bcl-xL; Bcl-2-like 1 (apoptosis regulator Bcl-X)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224667.1 True 2208 mRNA 0.44 3 11446999 11464891
XM_043224668.1 False 1131 mRNA 0.51 4 11448182 11464910

Neighbor

gene id symbol gene type direction distance location
wu:fa11c10 wu:fa11c10,LOC107672043,LOC107737632,LOC107560922,LOC107562466,LOC107741327,LOC107657022 coding downstream 18252 11411884 ~ 11428747 (-)
nsfl1c nsfl1c,LOC107737635,LOC107560918,LOC107741325,LOC107562467,LOC107657023 coding downstream 51526 11390561 ~ 11395473 (-)
trpc4apb trpc4apb,LOC107737634,LOC107560917,LOC107672047,LOC107741324,LOC107562468 coding downstream 60276 11379548 ~ 11386723 (-)
zgc:103759 zgc:103759,LOC107737722,LOC107562457,LOC107657028,LOC107741343 coding downstream 90320 11354880 ~ 11356679 (-)
arhgap4b arhgap4b,LOC107560914,LOC107737637,LOC107672018,LOC107741320,LOC107657026 coding downstream 95560 11325493 ~ 11351439 (-)
arfgef2 arfgef2,LOC107671990,LOC107737629,LOC107562465,LOC107741338,LOC108436330 coding upstream 1446 11466356 ~ 11488430 (-)
pard6b pard6b,LOC107737628,LOC107560924,LOC107657018,LOC107712746,LOC107562464,LOC108436329,LOC107671939 coding upstream 25256 11490166 ~ 11507285 (-)
LOC122328724 ebp,LOC107672060,LOC107712744,LOC107657016 coding upstream 51227 11516137 ~ 11517702 (-)
trnah-gug_32 NA coding upstream 53100 11518010 ~ 11518081 (-)
oard1 oard1,LOC107672023,LOC107712742,LOC107657014 coding upstream 65127 11530037 ~ 11531810 (-)
LOC122328925 NA non-coding downstream 70311 11376177 ~ 11376688 (-)
G156785 NA non-coding downstream 93171 11353159 ~ 11353828 (-)
G156762 NA non-coding downstream 202179 11242600 ~ 11244820 (-)
G156759 NA non-coding downstream 283980 11162664 ~ 11163019 (-)
G156726 LOC107737655 non-coding downstream 371038 11071410 ~ 11075961 (-)
G156812 NA non-coding upstream 74713 11539623 ~ 11540045 (-)
G156962 NA non-coding upstream 297530 11762440 ~ 11763023 (-)
G156971 NA non-coding upstream 316657 11781567 ~ 11782366 (-)
G156972 NA non-coding upstream 328693 11793603 ~ 11851710 (-)
G156978 NA non-coding upstream 590336 12055246 ~ 12061368 (-)
G156746 NA other downstream 341776 11100744 ~ 11105223 (-)
LOC122328798 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other downstream 768849 10675680 ~ 10678150 (-)
ankrd52a ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831,LOC107723718 other downstream 1061032 10218473 ~ 10385967 (-)
LOC122328546 rpl10 other upstream 276490 11741400 ~ 11746620 (-)
LOC122329329 NA other upstream 280352 11745262 ~ 11745395 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other upstream 298799 11763709 ~ 11857968 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other upstream 335012 11799922 ~ 11801632 (-)
G156985 NA other upstream 457934 11922844 ~ 11924650 (-)

Expression


Co-expression Network