LOC122328780


Basic Information

Item Value
gene id LOC122328780
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10343250 ~ 10346092 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224716.1
CTTTGACACACAAGTGAAATGTTGTTAATTTTTATACCCTCAGTCTCTATAAATAGTACGGTTACTTCCTTGTGTTCAAGCATATCAGCATGCTCCCACAAAATCTAACCCTGATCTCCTTGTTCATTTTACTGTGTCGACAAGgtgTTGACACAAAAAGGTACTTCACATGTGAAGGTGGCTCTGTTCCACTCAGCTGTGATTGGGGATACATAAAGGTGGTTACAGCCAATTATGGGCGAACCGACCACACAACGTGCTCCACTGGAAGATCACTTCATCAGCTCTCGAACGTCGACTGCTTCCACAAGACATCCCTCCATGTGATGTCCAAACGatGTGATGGAAGAAAGAGCTGTTCTGTTCCCGCAGTGAACTCGGTTTTCTCTGACCCTTGTATTGGGACTCATAAATACCTGGATGTGTCTTATTTGTGTCTCCCTTTTAGAAAAAGTGTCACGTGTGAAGGAAGCCGAAGTCTCATAGACTGTAGTAATGGTGAGATTTGGATTCATCATGCCAATTACGGACGGCGGGATCTTGTAACCTGTCCTCATAAATTAGCAACAACACCAGACTGTTACTCTCCTCAGACCGGCCGCCTGCGTTCCAGCTGCAATGGAAAGAGGTCTTGTCAATTAAATGCGTCAAATGCTTCCTTCCTCTCCGATTCGTGTCCGGATGTCCATAAATACTTAGAAGTGTTGTACAGCTGTATATAATATTGTGAGTATCctgccaaataaatgaattttatatgaactttaaataaaaaacaccacTTTATTA

Function

GO:

id name namespace
GO:0005215 transporter activity molecular_function
GO:0004418 hydroxymethylbilane synthase activity molecular_function

KEGG:

id description
ko00860 Porphyrin and chlorophyll metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224716.1 True 789 mRNA 0.42 8 10343250 10346092

Neighbor

gene id symbol gene type direction distance location
LOC122328770 pifo coding downstream 62711 10243928 ~ 10280539 (-)
rnf41 rnf41,LOC107723732,LOC107756409 coding downstream 130823 10204039 ~ 10212427 (-)
dgkaa dgkaa,dgka,LOC107549042,LOC107671885,LOC107701752,LOC107594021,LOC107756407 coding downstream 140443 10177186 ~ 10202807 (-)
tamalin grasp,LOC107723769,LOC107594022,LOC107549045,LOC107671830 coding downstream 167208 10162782 ~ 10176042 (-)
nr4a1 nr4a1,LOC107671891,LOC107723761,LOC107572787,LOC107756405,LOC107701750,LOC107549046 coding downstream 197798 10140150 ~ 10145452 (-)
LOC122328599 LOC107570968,LOC107656538,LOC107708815,LOC107756373,LOC107701716,LOC107586510 coding upstream 86672 10432764 ~ 10447218 (-)
LOC122329230 dnajc11a,LOC107708818,LOC107701714,LOC107756372,LOC107586512,LOC107656549,LOC108433830 coding upstream 103393 10449485 ~ 10456918 (-)
LOC122328445 zgc:173570,LOC107657062,LOC107559474,LOC107747974 coding upstream 170624 10516716 ~ 10521072 (-)
LOC122328446 LOC107707743,LOC107671949,LOC107657006,LOC107603135,LOC107559475 coding upstream 176006 10522098 ~ 10525372 (-)
LOC122328736 LOC107672006,LOC107603149,LOC107707753,LOC107657067 coding upstream 222473 10568565 ~ 10582430 (-)
LOC122328389 NA non-coding downstream 49207 10291465 ~ 10294043 (-)
G156313 NA non-coding downstream 226295 10112617 ~ 10116955 (-)
G156283 NA non-coding downstream 283947 10058011 ~ 10059303 (-)
G156278 NA non-coding downstream 289701 10052526 ~ 10053549 (-)
G156264 NA non-coding downstream 325829 10016456 ~ 10017421 (-)
G156341 NA non-coding upstream 2049 10348141 ~ 10351881 (-)
G156364 NA non-coding upstream 40862 10386954 ~ 10388615 (-)
G156452 NA non-coding upstream 194807 10540899 ~ 10542887 (-)
G156459 NA non-coding upstream 321865 10667957 ~ 10675579 (-)
G156468 NA non-coding upstream 350360 10696452 ~ 10696677 (-)
zgc:153284 LOC107701733,LOC107571300,LOC107756391,LOC107549061,LOC107708783 other downstream 509568 9831809 ~ 9833682 (-)
hmgn3 hmgn3,LOC107756386,LOC107671890 other downstream 534881 9801785 ~ 9808369 (-)
ccdc187 LOC107708822,LOC107570908,LOC107718813,LOC107656553,LOC107695760,LOC107586514 other downstream 1133286 9195310 ~ 9209964 (-)
ctnnbip1 ctnnbip1 other downstream 1245948 9079532 ~ 9097302 (-)
sst6 LOC107681964,LOC107571825,LOC107695779,LOC107570713,LOC107681961 other downstream 1416499 8921564 ~ 8926751 (-)
LOC122329224 NA other upstream 9849 10355941 ~ 10359786 (-)
LOC122328779 taf8,LOC107723763,LOC107756368,LOC107549030,LOC107671856,LOC107594013,LOC107701755 other upstream 17813 10363905 ~ 10367369 (-)
LOC122328798 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other upstream 329588 10675680 ~ 10678150 (-)
G156746 NA other upstream 754652 11100744 ~ 11105223 (-)
LOC122328546 rpl10 other upstream 1395308 11741400 ~ 11746620 (-)

Expression


Co-expression Network