asb8 (asb8,LOC107745463,LOC107681993,LOC107570421,LOC107563629,LOC107695815)


Basic Information

Item Value
gene id asb8
gene name asb8,LOC107745463,LOC107681993,LOC107570421,LOC107563629,LOC107695815
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 15929873 ~ 15934325 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224742.1
TGAAGAATGGCCTCTCGCACATACAGACGCGCTTAACTAATTTTAGTCGTATTTCTTTGCGCGTTTCCACGCTACAAACGTGCTTCGCCAATGAAAACAGACGGATAAATGGCGTTTTCGACTGTTTGTCACTTCCTCTCCTGACGTCACAGTGTTTGTGTTGAGCGCTGACACACTGGCAGATTAGCTACGAACCTGCAGCTGTTTTCATTTCCTGCAGGTACCGTTTTAACACTTAAACGTCTTCGATTGCATTGCGAGTTGTCTTTGTTTTACTCGAGCGCTTGCGGCTGAGAAGATCCAGAGCCATCTCATTTTGGTGCGCCGTCACCCGGTTTGGGTGAAATGTCCTTTAGTTCCACATGAGCTCTACTATGTGGTACATCATGCAGAGTATTCAGAGCAAATACTCATTGTCGGAAAGGCTCATTCGAACCATAGCTGCCATTCGCTCCTTCCCACATGATAATGTGGAAGATCTCATACGCAGGGGAGCAGATGTGAACCGGATGCATGGCACGCTGAAGCCCCTGCACTGCGCCTGTATGGTGGCTGATGCCGACTGCGTCGAGCTTTTGCTGGAGAAAGGTGCCGAGGTAAATGCCTTGGATGGCTACAACCGCACTGCTCTGCATTACGCAGCGGAGAAGGACGAGGGTTGTGTGGAGCTGCTTCTAGAATACGGGGCCCAGCCGAATGCTCTAGACGGCAACAAGGATACCCCACTGCACTGGGCCGCCTTCAAAGATAACCCCGAGTGCGTACGAGCCCTGTTAGAGAGCGGCGCATGCCCGAATGTCCGCGACTACAATAACGACACACCCCTCAGTTGGGCGGCCATGAAGGGCAACCTGGAGAGTGTGCGCGTGCTGCTGGAGTACGGAGCTCAAGTCCACGTCACCAACCTAAAGGGCCAGACGCCCATCTCGCGGCTGGTGGCGCTGCTGGCTCGGGGCCTGGGCACGGAACAGGAGGAAGAGTGCCTGGAGCTGCTCTGCCGCGCCGCGGGGAGGTTCGAGATCCGCAGGGCCGACGGCTCTTTACCACGTGAGCTCAGTAAAGATCCTCAGTTACTGGCTCGACTCACTAGCCTCGTAGCCCAGCCGCCCTCGTTGCGGGCCTTGGCGCGCTGCGCCGTTCGTAACAGCCTGGGAGTTCAGTTCCTCCCAACTGCAGTGAAACAGCTCCCGCTTCCAGAGTCAGTGAAAGAATACGTGCTCCTCAGAGACTGAGCGAGAAGACTGTGCTTAATGTCGGACGTGGAGGAGGTAGATGTCTTCTGTGTACGTGAACGTGATTGTAATCAGACTGCAATCTGAAGTGTGTCTGTCCATATACAGTGGGTGAAGAAGTGAGGACGTTTCATGTTTCTTTTGTTGCTATAATGCCATCAAAAACAAATTCAGACTCGGGCTACAGTATGATTGTCTGCTTGAGTGCGGAAAAATATTGATCTGGGAGGAAGGAAACCCATAATAACAATGTCCGAAACACTCTTGATTgcgaaaacatgaaaataatttaaaaatattatttaccaGTAAATCCTATGTACACACAAATAACACTTTAACAGCACTTATAAGTTATAGTtctatattacatttgtttcttaaatttgaagttttcaatttttattatgcagtaatatttttttaagacagCTAAAACCTTTACgttttaaagtcaaataaatattaacatgtttGTTGAATCATTTTAAGAGGCTTCTCAGTTATCAAAAATAATCTAGGAAATgtgggtgatttttttttttttttttttttttcaaaatagtgCATTTGCCTCAAAGTAACCTTGTTTTACATTTGTCTACTATTGAGACAGAGAAATATAGGAACACTTCATTGGATTTCAAAACTATATCTATTTCTGTCCATCTATCACATTTGTCATGAATATTTATCTTAAAAACGACCTGGTTTGGAGTCTTAGATTGTATTACTTATTTTGGTGCTGATGATTGCAGAAAATGAGCTGTATTTACGTTTGAGAAGAAAACATTAACAAGCATATTCGGTGTCAGTTATGagaatgtccttttttttttttttcttctttttttttttttttttagctttgcaGTGTCATGCAAGCATGATCATTCCAAAAGCTGGCAGACCATGAATGGGATGTCTCAATGAATTCGTGTCATCTTGTGAACCCTCACAGATATTTTGCagctctgttttcatttcactgTTGTTATATTGCTTGATTAAAAAGTATGTAGTGCTCACATCTAGTTTTATGCATGCAGACTAACCAGTAAAGGCCTCCATGCATTGTT
>XM_043224743.1
GTGAAGAATGGCCTCTCGCACATACAGACGCGCTTAACTAATTTTAGTCGTATTTCTTTGCGCGTTTCCACGCTACAAACGTGCTTCGCCAATGAAAACAGACGGATAAATGGCGTTTTCGACTGTTTGTCACTTCCTCTCCTGACGTCACAGTGTTTGTGTTGAGCGCTGACACACTGGCAGATTAGCTACGAACCTGCAGCTGTTTTCATTTCCTGCAGCCATCTCATTTTGGTGCGCCGTCACCCGGTTTGGGTGAAATGTCCTTTAGTTCCACATGAGCTCTACTATGTGGTACATCATGCAGAGTATTCAGAGCAAATACTCATTGTCGGAAAGGCTCATTCGAACCATAGCTGCCATTCGCTCCTTCCCACATGATAATGTGGAAGATCTCATACGCAGGGGAGCAGATGTGAACCGGATGCATGGCACGCTGAAGCCCCTGCACTGCGCCTGTATGGTGGCTGATGCCGACTGCGTCGAGCTTTTGCTGGAGAAAGGTGCCGAGGTAAATGCCTTGGATGGCTACAACCGCACTGCTCTGCATTACGCAGCGGAGAAGGACGAGGGTTGTGTGGAGCTGCTTCTAGAATACGGGGCCCAGCCGAATGCTCTAGACGGCAACAAGGATACCCCACTGCACTGGGCCGCCTTCAAAGATAACCCCGAGTGCGTACGAGCCCTGTTAGAGAGCGGCGCATGCCCGAATGTCCGCGACTACAATAACGACACACCCCTCAGTTGGGCGGCCATGAAGGGCAACCTGGAGAGTGTGCGCGTGCTGCTGGAGTACGGAGCTCAAGTCCACGTCACCAACCTAAAGGGCCAGACGCCCATCTCGCGGCTGGTGGCGCTGCTGGCTCGGGGCCTGGGCACGGAACAGGAGGAAGAGTGCCTGGAGCTGCTCTGCCGCGCCGCGGGGAGGTTCGAGATCCGCAGGGCCGACGGCTCTTTACCACGTGAGCTCAGTAAAGATCCTCAGTTACTGGCTCGACTCACTAGCCTCGTAGCCCAGCCGCCCTCGTTGCGGGCCTTGGCGCGCTGCGCCGTTCGTAACAGCCTGGGAGTTCAGTTCCTCCCAACTGCAGTGAAACAGCTCCCGCTTCCAGAGTCAGTGAAAGAATACGTGCTCCTCAGAGACTGAGCGAGAAGACTGTGCTTAATGTCGGACGTGGAGGAGGTAGATGTCTTCTGTGTACGTGAACGTGATTGTAATCAGACTGCAATCTGAAGTGTGTCTGTCCATATACAGTGGGTGAAGAAGTGAGGACGTTTCATGTTTCTTTTGTTGCTATAATGCCATCAAAAACAAATTCAGACTCGGGCTACAGTATGATTGTCTGCTTGAGTGCGGAAAAATATTGATCTGGGAGGAAGGAAACCCATAATAACAATGTCCGAAACACTCTTGATTgcgaaaacatgaaaataatttaaaaatattatttaccaGTAAATCCTATGTACACACAAATAACACTTTAACAGCACTTATAAGTTATAGTtctatattacatttgtttcttaaatttgaagttttcaatttttattatgcagtaatatttttttaagacagCTAAAACCTTTACgttttaaagtcaaataaatattaacatgtttGTTGAATCATTTTAAGAGGCTTCTCAGTTATCAAAAATAATCTAGGAAATgtgggtgatttttttttttttttttttttttcaaaatagtgCATTTGCCTCAAAGTAACCTTGTTTTACATTTGTCTACTATTGAGACAGAGAAATATAGGAACACTTCATTGGATTTCAAAACTATATCTATTTCTGTCCATCTATCACATTTGTCATGAATATTTATCTTAAAAACGACCTGGTTTGGAGTCTTAGATTGTATTACTTATTTTGGTGCTGATGATTGCAGAAAATGAGCTGTATTTACGTTTGAGAAGAAAACATTAACAAGCATATTCGGTGTCAGTTATGagaatgtccttttttttttttttcttctttttttttttttttttagctttgcaGTGTCATGCAAGCATGATCATTCCAAAAGCTGGCAGACCATGAATGGGATGTCTCAATGAATTCGTGTCATCTTGTGAACCCTCACAGATATTTTGCagctctgttttcatttcactgTTGTTATATTGCTTGATTAAAAAGTATGTAGTGCTCACATCTAGTTTTATGCATGCAGACTAACCAGTAAAGGCCTCCATGCATTGTT

Function

symbol description
asb8 Predicted to be involved in protein ubiquitination. Predicted to act upstream of or within intracellular signal transduction. Is expressed in gut; liver; and yolk syncytial layer. Orthologous to human ASB8 (ankyrin repeat and SOCS box containing 8).

NR:

description
PREDICTED: ankyrin repeat and SOCS box protein 8 isoform X1

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0016567 protein ubiquitination biological_process

KEGG:

id description
K10330 ASB8; ankyrin repeat and SOCS box protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224742.1 True 2311 mRNA 0.45 4 15929873 15934324
XM_043224743.1 False 2226 mRNA 0.45 4 15929873 15934325

Neighbor

gene id symbol gene type direction distance location
atf7a atf7a,LOC107563644,LOC107681998,LOC107716199,LOC107745462,LOC107570410,LOC107695816 coding downstream 1070 15906598 ~ 15928803 (-)
dip2ba dip2ba,LOC107745461,LOC107687534,LOC107563628,LOC107570362,LOC107695817,LOC107716198 coding downstream 23904 15868340 ~ 15905969 (-)
scn8aa scn8aa,LOC107570345,LOC107745459,LOC107695818,LOC107716197,LOC107563626 coding downstream 69050 15814709 ~ 15860823 (-)
fignl2 si:dkey-157g16.6,LOC107745458,LOC107570337,LOC107687555,LOC107571780,LOC107716072,LOC107695734 coding downstream 121349 15759885 ~ 15808524 (-)
stat6 LOC107570234,LOC107745457,LOC107571782 coding downstream 173807 15737601 ~ 15756066 (-)
LOC122328789 LOC107681987,LOC107745464,LOC107563630,LOC107695814 coding upstream 1028 15935353 ~ 15948063 (-)
pfkma pfkma,LOC107745467,LOC107681974,LOC107563631,LOC107716200,LOC107695813,LOC103038352,LOC108276103 coding upstream 14757 15949082 ~ 15957398 (-)
LOC122328386 LOC107745468,LOC107681975,LOC107570394,LOC107716202 coding upstream 23571 15957896 ~ 15964419 (-)
phf8 phf8,LOC107570386,LOC107745465,LOC107681973,LOC107563633,LOC107695732 coding upstream 32096 15966421 ~ 15975709 (-)
arf3a arf3,ARF3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 coding upstream 44291 15978616 ~ 15983169 (-)
G158208 NA non-coding downstream 116946 15812281 ~ 15812927 (-)
G158198 NA non-coding downstream 140542 15728154 ~ 15789331 (-)
G158188 NA non-coding downstream 248001 15680886 ~ 15681872 (-)
G158174 LOC107571455 non-coding downstream 322793 15603848 ~ 15607080 (-)
G158024 si:ch73-206d17.1,LOC107571682,LOC107726152,LOC107695830 non-coding downstream 452104 15476487 ~ 15477769 (-)
G158227 NA non-coding upstream 30428 15964753 ~ 15965763 (-)
G158282 NA non-coding upstream 167300 16101625 ~ 16102214 (-)
G158284 NA non-coding upstream 183556 16117881 ~ 16118214 (-)
G158333 NA non-coding upstream 312691 16247016 ~ 16247293 (-)
G158353 NA non-coding upstream 482600 16416925 ~ 16439280 (-)
LOC122329227 NA other downstream 212623 15621942 ~ 15717250 (-)
magi3a magi3,magi3a,LOC107695739,LOC107564661 other downstream 455483 15347417 ~ 15474390 (-)
LOC122328902 LOC107737500,LOC107673074,LOC107695835,LOC107564653,LOC108275744 other downstream 628191 14684890 ~ 15301682 (-)
LOC122328913 zgc:162898,c4h15orf61,LOC107738714,LOC107686305,LOC107583911,LOC107718314,LOC107596966,LOC107672207 other downstream 881529 15047152 ~ 15048344 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other downstream 1340251 14570347 ~ 14589622 (-)
G158231 NA other upstream 73781 16008106 ~ 16008915 (-)
G158288 LOC107708856,LOC107570569,LOC107716212,LOC107681953,LOC107695729 other upstream 209508 16143833 ~ 16169834 (-)
tac3a LOC107708854,LOC107571761,LOC107681951,LOC107586540,LOC107695797 other upstream 306485 16240810 ~ 16243395 (-)
G158336 LOC107716221,LOC107570608,LOC107586536,LOC106567035 other upstream 421044 16355369 ~ 16358705 (-)
slc48a1a slc48a1a,LOC107671836,LOC107598487,LOC107594008,LOC107756371,LOC107697869,LOC107757747 other upstream 1242300 17176625 ~ 17184385 (-)

Expression


Co-expression Network