fbxo30b (fbxo30b,LOC107718004,LOC107680062,LOC107571806,LOC107687300,LOC107565976,LOC107735267)


Basic Information

Item Value
gene id fbxo30b
gene name fbxo30b,LOC107718004,LOC107680062,LOC107571806,LOC107687300,LOC107565976,LOC107735267
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 2714497 ~ 2720029 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224880.1
ACCACAACGTCACGACGCTCGAACATGCGCGATGACGTCATCGGCGCGCGTCCCGGCCGGATAGAGCGTTTTCGGACAGGACAAACGGCGATGATTGTTATCACACGGCAGGGTTTTAAAGTGTCCCGTTTCATCGCAAAACCGGACAAGTGCGAGTAACAGGCGAGGGGCGTGAGCGAGTAACGCGGGGAGTCGGTTGACATAGCGTGTGGTGGTTCAGACTCCTGTTTCACGTCTTGCTGCTGCCATCGTAAATAATGGAGGAGCCTCATGTTCACTGCATGTCCTGCATAAGCAGAAGATGCATGGTCAAACCTGAACCTGGCGCTTCCTGTGACCTCATCACCTGTCCTCTTGTATGTGGTGCTATCTTCCACAGCTGCAAGGCTATTGAACACAAGCTGCTGTGCCCGCTTGAAAGGGTGCCATGTCTTAACCAAAGCATTGGATGCCCTTTTACGCTGGCCCGTGGCCAGATGGCAGAGCACCTTGAGGTGTGTCCTGCAGGTGTGGTGTGCTGCACTATGGAGTGGAATAGGTGGCCAGTAAACGTCGAGGATTATCGTTCGTATGAGAGACTGAGTCAAGAAGCAGATGAGGTGGAGCAGCTTGACATGGCGCTTGCCCTTCAGGACCAGCGCACCATGTTGGCGTCACTCAAACTCGTCTCTCTGGCTCCTACTAGTGGCCCGGAGAAAAAGACTCAACGCGAAGAGCCTGGCCTAGTCTCAATTGCTCAGTCTGAATGTGTGCAGGTGGAGAGTATTGAGATGGGGCCTATGGCTGGCTGCTCAAAAGACAAAATCTCCAATGGGATTAATGGTCTAAAAGAAGAACATTATGGGGAGCTCTACCAAACTACAGTAGAAACAACCAAAAGCCTGGCCGCAGCTCTCAATGTCCTGATCCACCTTAATTCTTCAGAAACAGACTGTACAACCTCTAATGCGTCAGCTGGACTTACAGAGTGTAATGGGGAATTGCATGAAACGGTAAGGATGAGAGAGGATGCCGGGTTCAGCTGTGATAAAATAGCTAGCGGAGTCAATGGCCTAAAGGAGGAGCTACAACCTCAACAGCACCAGAAACTCATGGAGCTTGGCAGGAGTTTGGCCTCTGCTCTCGGTGCGTTAGGAGATGCTGTCAAAGGCAACGAGACGGTTAGTGGCTCGATACTAAACGACAATGGCAGGTTCAATCAGTCAGAAACTTTGGAGTCGGCAGATGTTGATATGAAGGATGTAACATCTGAAGTTAATGGTGAGACTGGGGCTGTTGGGGGAATTGATGCTGGAGAAACCGCATTAGATGTTCTTACTCATAAAGCAAGTGAGTGTAGcccagtcatgttggaagacgTAGATAGGCGAGGTTTCTGTAATGGCTCTCATAGTATTGTAGATCACTTAATGGAATCGACCACCGAGCACCATGAAAACTCAAAGTCCCGAGGTTCTTGGGAGTTTGTTGGTCCTTTAGTTCCTCACAGGCCAGAGATCAGACACGATCAGCATGCTTTCTTGATCCAGGAGGCCTCTGGATCACAACCCCCATTGCTGCAGCAGCCAATACACGCTCAGACTCTGACCATCCAGAGAGACAATGCACTACCTATGATGGCATTAGACTTTGAAGACAGGGCTTTTGAGAGGAAACTCCAAAACCTTCAGTTGCTGCGAAATTTTATGCCACTTGCACTTAATGGACGGAAGAGCTCATATGCAGAAGTCTTTCCTCATAGAAATCCACATTGCAAAATGGAGGACAAAGCTGTGGACACATCGGATTTGGATCAGGAACCAATGGACGACCCAATGGGACTTGGCGAAATTGACTTTACGGCAGCTGCTCTGCTCTTCTGCTTGGAGGAGTCGCCGCGAGCTCGGCGGATATCCGACGCGGTCTATGCATTTGGGGGCACACGTGTAGACTTCGGTACCCAGACGTTTAGTTTCCCCGCTGCCATCTTAGCCACAAGCACGATGGTAGGTGAGGTTGCATCGGCTTCCGCTTGCGATCGAGCCGCGCCTCGCCTTTCGCAACCAAGTCCGTTTTGCACTCTGCGGCTTGATCTGACGCTGGAGCAGCTTGTGCCTCGCCCAAGCTGGGCTCCACGCGAGGGCTCCATGTTTACCTTTGAGTGCGGCCAGCTCTTCCGTCGAGAAGAGTTCCTCTCGCATTTTCGCAATGTTCATGGAGATATCCACTCTGGACTCAATGGTTGGATGGAGCACCGTTGTCCGTTAGCGTATTATGGCTGCACGTACTCCCAACGCAGATTCTGCCCATCCACTCAGGGCTCGAAGGTTGTTCATGACCGCCACCTCAGGTCCTTCGGGGTGCAACCCGACTCGGAAACTGTGACCGAACCCAAGTGTGATCACCTTAGTGGACTGCCGTTTGAAGTACTTCAACATGTAGCCAGATTTTTGGATGGTTTTAGCCTGTGTCAGCTGTCAATGGTGTCCCGTACAATGAGGGATGTATGTGCCAGTTTGCTGCAGTCTCGTGGCATGGTAGTGGTACAGTGGGAAAAGAAGCAATTTTTGGATGGAAGACGAACCTGGCAGATTAAAGACAAGGTTTGGCGTTTTAGCACAGCCTTTAGCCCAGTTAACCGGTGGGAGTTTGCAGACATCTCTAGCATGGCAGACCACCTGAAACGCTGCCCGTACAATGAAGTCCTCCGACAAGTGGACGCCGTTCCACTGCCCTGCATGTGCACGACCAGAGAGCTAACTCGAGACGGCAGATCACTTCGATCTGTTCTCAAACCAGTATCATAACGGAAACCTAGTTTgcaaaacataactaaaacGCTACAATATTTAACCTCTTTGTTCGACGGTATAATATCGCTGTGTAAATAAAaggaaactaaatatttttttctgttttgatgctaagattatttttttattaatatatcaaaGTTTAATTTGGTCTGAAGGTGTGTGATGCTAATGGTTCCTCTAAGAAAATAACGGTTTTGCTTCCTCTTACGCAGACTCATGTTTTCTTTGTCGAGACTAAGGACCGGTTTAAAGGAGAGTAAACCTCGGTGAAGCAAGGCTTAATTCAATGGGATTATATGAGCCTCAACCTGTCAAATAGCACTTGATTTATTTGTCTTGACACCGCAAGATAATCTCCGTAAAGATTATCAGATAATGACTTCTGGTTCCTGTCAGTGCATATCCACAGTATGTTTGCATGGTTGAAGATGCCGTTTGAAATAAGACACCTCCTATGATTATTTTTGGGATGGTTcagttttgcttcattttatGGTGACATTGCAGACTGGTGCTCTTCGCCCTGACCTGGGAACGGCTGTCATGAGTTCAAGGGCTTGGATTTATATTGGGTTTCACAGTAAGAGAGCCGTTCTTCCTGTCACATTGCCACAGAAAAGGAGGTTTCCATTTACAGCAATTTTACGATTGCCGCTCTCTTAAAGACTTCATCCAGAAATGGCACGAATGGACGTTAGTCAAATGGCTACGTACACTCTCTATGTACCGAAGCATACATACTAAAACATACACcttgacttatttttttacatttgttctcCAGTACTGTATCACTCAATATCAGCATGCCAACCATATATCAGCATTTAGAGTCAATATTTGCACTTTACCCGCATTTTGTGGCTGTCTGCACTCCGATCTGCACTATCCTCACTAACCTGGAGTAAACGGATGCTCTGCTATTGTATTTCCTATTGAGTGAGCAGGAAAAGCTTAGGTAACACTATATTTGAGTACAAAGAAGAGCTCTATAACTTACATACATGTGGTGTGTGACATATCTTAACCCGTGTTCTGCATTTAAACGTGTGCTGTGAGGATTTGCGAAGGCTAATGTTTGAAGGCGTGATCTGCAGCTAATGAAACACCACAGATGTGTTTCTTTTAACCTTTAAGGTTTATGGAAAGCTATATGCAGCAATTATGTGTTAGGAGCTGTTTTAGGCTTCTCGGCTTGTGTGTCACCCAAGGTTGTGTGTTCATTTCCATGTaatcaaaatgaagtgtttttttttttaaatgcagtccaTATATTGTGTTACTGAAGCCATGGTTGttaggtttgtttgtttatgatcTAAGAAGGCGAATTGCCAGTACAGCTGTTGATTGCAATTGCATGTGGTTTTTGacttaaatgaattaaaaatatctatatattttattatcttca

Function

symbol description
fbxo30b Predicted to enable ubiquitin protein ligase activity and zinc ion binding activity. Orthologous to human FBXO30 (F-box protein 30).

NR:

description
PREDICTED: F-box only protein 30-like

GO:

id name namespace
GO:0016567 protein ubiquitination biological_process
GO:0004842 ubiquitin-protein transferase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224880.1 True 4209 mRNA 0.47 3 2714497 2720029

Neighbor

gene id symbol gene type direction distance location
epm2a epm2a,LOC107718005 coding downstream 192 2701815 ~ 2714305 (-)
LOC122328840 LOC107669688,LOC107710232,LOC107710235,LOC107570773,LOC107570771 coding downstream 234972 2464186 ~ 2479525 (-)
cpeb2 cpeb2,LOC107723019 coding downstream 445590 2245740 ~ 2268907 (-)
LOC122328872 c1qtnf7,LOC107670563,LOC107549168,LOC107723016,LOC107669695,LOC107710240 coding downstream 473846 2234831 ~ 2240651 (-)
cc2d2a cc2d2a coding downstream 480909 2214388 ~ 2233588 (-)
LOC122328868 LOC107565964,LOC107571805,LOC107718002,LOC107680061 coding upstream 3812 2723841 ~ 2726856 (-)
LOC122329165 LOC107571805,LOC107687299,LOC107565964,LOC107718002,LOC107748429,LOC107680061 coding upstream 6801 2726830 ~ 2729496 (-)
LOC122329166 LOC107571805,LOC107718002,LOC107687299,LOC107748429,LOC107565964,LOC107680061 coding upstream 10793 2730822 ~ 2759122 (-)
frmd4bb frmd4bb,LOC107558919,LOC107687288,LOC107709245,LOC107704625,LOC107748434 coding upstream 294587 3014616 ~ 3062072 (-)
LOC122328867 LOC107558923,LOC107687304,LOC107709232,LOC107748446 coding upstream 375034 3095063 ~ 3099888 (-)
G154338 NA non-coding downstream 54636 2659550 ~ 2659861 (-)
G154336 utrn,LOC107710234,LOC107549160,LOC107669681 non-coding downstream 57915 2648154 ~ 2656582 (-)
G154288 NA non-coding downstream 131410 2488745 ~ 2583087 (-)
G154278 LOC107549161,LOC107719954 non-coding downstream 233624 2480607 ~ 2480873 (-)
G154277 NA non-coding downstream 234243 2479885 ~ 2480254 (-)
G154391 NA non-coding upstream 101291 2821320 ~ 2823072 (-)
G154404 NA non-coding upstream 127329 2847358 ~ 2847619 (-)
G154405 NA non-coding upstream 131285 2851314 ~ 2851524 (-)
G154407 NA non-coding upstream 132590 2852619 ~ 2853230 (-)
G154406 NA non-coding upstream 136559 2856588 ~ 2860182 (-)
LOC122328833 LOC107669693 other downstream 597614 2102710 ~ 2116883 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other downstream 1202168 1507698 ~ 1512329 (-)
l3mbtl1 l3mbtl1,LOC107736954,LOC107564793,LOC107684891,LOC107675169 other downstream 1649723 1053377 ~ 1064774 (-)
vgll4a LOC107675174,LOC107736947,LOC107713758,LOC107684880,LOC107555803,LOC107574679 other downstream 1832313 865477 ~ 882184 (-)
ndnl2 ndnl2,LOC107736943,LOC107568481,LOC107714263,LOC107660884 other downstream 1928618 779085 ~ 785879 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other upstream 49453 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other upstream 67267 2787296 ~ 2798533 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other upstream 149589 2869618 ~ 2874758 (-)
G154446 NA other upstream 205019 2925048 ~ 2957272 (-)
G154445 NA other upstream 205276 2925305 ~ 2951628 (-)

Expression


Co-expression Network