LOC122328868 (LOC107565964,LOC107571805,LOC107718002,LOC107680061)


Basic Information

Item Value
gene id LOC122328868
gene name LOC107565964,LOC107571805,LOC107718002,LOC107680061
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 2723841 ~ 2726856 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224926.1
GAATCTAACAACGAACCCAGTGTGTGACTCAACTGGCATGGCGGTAACATGGTCACCCTCTCTGGTTGCCGAGTCATACGCACTCACAGCCAGCAGTAGAGATGGAGATGTCCGCACCTGCAGAAGCACCACAAACAACTGCACCCTGCTTCACCTGCATTGCGGACagatttatgacattaaaataacgGCTTCGGCTGGAAACTGCACCAGCCTGGCCAGTCAACAGGTCACCTTCTCTACTGTGCCCTGTGAGCCACAGAACATGACTGTGGAAGTGCAGTGTGACACCGGGACCGCCACACTTTCCTGGGTCAAGGGTCAAGGTTCACTTCACTACTTCACAAAGGTTCAAACTATGGACGGGCACATGGTTCACTGCGACACTACAAACGCGTCCTGTAGTTTTCGTGGACTGGCCTGTGGGGCGTTGTACAACTTCAGTGCGCAGGTTTCAGATGGAACCTGTAACAGCTCCCTCACTATACCAATCCAGAAAGGAGCAGTCCCATGTCCTCCTGACACTGTAAGGGTGAGGACACATGTGATGGTTGATGCCACTCTAATCAGGGTCAACTGGAATTTTGTGAGATGTCCTAACGTCACATACCTGGTGCAGGTGACAGGCAATATCCAGAACAACCCAGCTTCTCTTATTGATATGTCATCCTACTGGACAGGCATCAACTACTTTGAGTTTCCTGTTCCCTGTAGCACCACTTacagtgtgtctgtgtttgcacAAAACTCAGCAGGGATCAGCAAACCATCTCAGGCTGTTACTGGTGTCACAGTGCCCTGTCCACCAGTGAATGTCACCTTCACGGGTGGCAATTCCTCGGCCAGAGTGACCTGGATGTCCTCAGCTCTTATCACAGGATACAGGGTTTACCAGCTGAGCTCTAACGGCAGGGTGCCCGTCTGTCTCACCTCAAACCTCAGCTGTGAGGTCTCTGGCCTGCAGGCCTCTAATGTTGCTGTGACGGCCTGGAACAGTGCAGGAGAGAGTCTCGCATCTAGAGTAGCTactgGTCAAACCTCGAACCGTCGAAAGAGAAATCTGGAATATGCAAAGATGTTTGCATCACTAACCCCTGAGGAGCTGGCCGTCCCTGAGGTGAAGGTTGCCGTGACCGGACATTCACTACAGGTCAAGTGGTCTCGGGTGACAGGAGCGGGGTCCTACACTCTGATTGTATACAAGGACACCGAAGAACAGCCGAAGGAGGTTGTGTCCATATACAGGACTGAGATCGCTACAGTTACTGATCTAGAACCTGCGACACTTTACTGCATCATCGTGTCTGCCAAAAACCACAACATCCAGAGCGCCTACTCCCAGCCTGTGTGTGTCACTACTAATGCCTCCAAGTAAACGGCCTTCCTGCAGGGTGGACTGTACAGGACTGTAGatacaaaacaaaccaaagtgGTGTTGAGTTCTCTGAACTAGCGTCTTCTCTTTCTTATATCCCATGATTACTactaaaaagacaagaaaatcaaatagaattaaaatgtcttgattATGTCTCCTTAACTAATCATTTTCCAATGAACCCAATCACAAtattgataattatttttatgatgttataCCTAATATATAACCATTtctgttgattaaaaaaaaaacataggcaGGGTCACTTAAAATGAAGAATAGATGTGGGGAAAGATTCTACATTGATTGACCAACATGTTATACTGTAACACatagtttttaaagaaagttgtGTATTTATCTTAAAGTCATTTTCTGTAACCAGgtcataaaatgatttaatcaaGAATGTTTGTGTagttagatcaaataaatggttaatttatcaagcatta

Function

NR:

description
PREDICTED: serine-rich adhesin for platelets-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224926.1 True 1839 mRNA 0.46 6 2723841 2726856

Neighbor

gene id symbol gene type direction distance location
fbxo30b fbxo30b,LOC107718004,LOC107680062,LOC107571806,LOC107687300,LOC107565976,LOC107735267 coding downstream 3812 2714497 ~ 2720029 (-)
epm2a epm2a,LOC107718005 coding downstream 9536 2701815 ~ 2714305 (-)
LOC122328840 LOC107669688,LOC107710232,LOC107710235,LOC107570773,LOC107570771 coding downstream 244316 2464186 ~ 2479525 (-)
cpeb2 cpeb2,LOC107723019 coding downstream 454934 2245740 ~ 2268907 (-)
LOC122328872 c1qtnf7,LOC107670563,LOC107549168,LOC107723016,LOC107669695,LOC107710240 coding downstream 483190 2234831 ~ 2240651 (-)
LOC122329166 LOC107571805,LOC107718002,LOC107687299,LOC107748429,LOC107565964,LOC107680061 coding upstream 3966 2730822 ~ 2759122 (-)
frmd4bb frmd4bb,LOC107558919,LOC107687288,LOC107709245,LOC107704625,LOC107748434 coding upstream 287760 3014616 ~ 3062072 (-)
LOC122328867 LOC107558923,LOC107687304,LOC107709232,LOC107748446 coding upstream 368207 3095063 ~ 3099888 (-)
LOC122328874 LOC107704620,LOC107748451 coding upstream 375212 3102068 ~ 3106940 (-)
tmem106c tmem106c,LOC107697039,LOC107704621,LOC107558924 coding upstream 380151 3107007 ~ 3113429 (-)
G154338 NA non-coding downstream 63980 2659550 ~ 2659861 (-)
G154336 utrn,LOC107710234,LOC107549160,LOC107669681 non-coding downstream 67259 2648154 ~ 2656582 (-)
G154288 NA non-coding downstream 140754 2488745 ~ 2583087 (-)
G154278 LOC107549161,LOC107719954 non-coding downstream 242968 2480607 ~ 2480873 (-)
G154277 NA non-coding downstream 243587 2479885 ~ 2480254 (-)
G154391 NA non-coding upstream 94464 2821320 ~ 2823072 (-)
G154404 NA non-coding upstream 120502 2847358 ~ 2847619 (-)
G154405 NA non-coding upstream 124458 2851314 ~ 2851524 (-)
G154407 NA non-coding upstream 125763 2852619 ~ 2853230 (-)
G154406 NA non-coding upstream 129732 2856588 ~ 2860182 (-)
LOC122328833 LOC107669693 other downstream 606958 2102710 ~ 2116883 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other downstream 1211512 1507698 ~ 1512329 (-)
l3mbtl1 l3mbtl1,LOC107736954,LOC107564793,LOC107684891,LOC107675169 other downstream 1659067 1053377 ~ 1064774 (-)
vgll4a LOC107675174,LOC107736947,LOC107713758,LOC107684880,LOC107555803,LOC107574679 other downstream 1841657 865477 ~ 882184 (-)
ndnl2 ndnl2,LOC107736943,LOC107568481,LOC107714263,LOC107660884 other downstream 1937962 779085 ~ 785879 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other upstream 42626 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other upstream 60440 2787296 ~ 2798533 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other upstream 142762 2869618 ~ 2874758 (-)
G154446 NA other upstream 198192 2925048 ~ 2957272 (-)
G154445 NA other upstream 198449 2925305 ~ 2951628 (-)

Expression


Co-expression Network