LOC122328872 (c1qtnf7,LOC107670563,LOC107549168,LOC107723016,LOC107669695,LOC107710240)


Basic Information

Item Value
gene id LOC122328872
gene name c1qtnf7,LOC107670563,LOC107549168,LOC107723016,LOC107669695,LOC107710240
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 2234831 ~ 2240651 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224930.1
GGTTGCTGTGTGACCTCACTGAGAAACGCCGTAGGAGTGTCTTTCAAGTGGGTGGTTAAAAACTCTTTCCACAAGTAAATCAGGAATGCTGAAAGATCACTGCAAACATCTTGCAGAAATGCGCTCATTTAGAGAGATTGATGAACGGAGAGGAACGGAGACAGACAGAAGCATGACAGCAGATAAAGAGAAGTCAGACAGAATCACAGCAGCGCAGAGGGAGAGATGATCATGACATATATGCATCTGCTGCAAACCTTCGGCTTACATGGATGTACAGAAAGGAAACAAGAAGAGAAGTAAAACACGAGAAAATAAGACACAGCTCAAACTGAGGAATTTAAACAAGGAAAGGACATCAGTGAAACAATAAGTCAGGACGACTAAAACAACCCGGCAACAGAAACTGGTCCGAGGATGTGGACGATTGTGGGTGTGGTCTGTCTTTCTCAGTGCATTATGGGTCAGCTGCTGGAGGCCAGGACCAAAGGAGCCCTGCCTCAGTTTATTTGCAGCATACCAGGTTTGCCAGGAGCCCCGGGAAAGACCGGACCTCCTGGGCCTTGTGGAGAGGATGGCCATGTCGGAATCCCAGGAAGAGATGGGAGGGATGGACGGAAGGGggagaaaggagaaaaaggaGAACCAGgCCTCAGAGGTAGAGTCGGGCCGACGGGAAAGCTTGGGGAACGTGGAGAGAGAGGATTCATTGGGAAGCGTGGCCCTGAAGGGGATCCTGGAGATTTAGGGCCTCCTGGTCCTCCGGGACGTCTCGGGCTAAAGGGTGACAAGGGCCAACGAGGCCCTCGGGGGGAACCAGGCATCTGCAGATGTGGAAGTTTGGTTCCCAAATCTGCTTTCTCTGTAGGCATCACCAGCAGCTACCCCACTGAGCAAGCACCTATCAAATTCAACAAAGTTCTGTTTAATGAGGGTAGCCACTACAACCCAGAGACAGGAAAATTTATCTGCGCTTACCCAGGAATATACTACTTTTCTTATGACATCACCTTGGCCGACAAGCACCTGGCCATTGGTTTGGTTCAGAACGGACAGTACCGGATAAAGACTTTTGATGCCAACACAGGAAACCATGACGTGGCGTCTGGCTCAACAGTGATTTTTCTCAACCCAGAGGATGAGGTGTGGCTGGAGATCTTCTACAAGGACCAGAACGGCCTGTTTGCTGACCCCGGCTGGGCTGACAGTCTGTTCTCTGGGTTTTTACTTTATGCAGATACAAACTATATGGATACATTGGCGGAAGACTATTAGTAGCTGCATTAACATCATTAACTGGTGTTATCTTGGGTTGGGTTAAATTTTTAGACactgtttccatttttaaacaagacagtaacacacacacatacacacacacactcacacacacacaaaaaaaaatatacaaaacatttttgcattgaaaatctttcattcagttatttttgtgaTCATTTTGAACGGTGATGTgtgatattttgtattatttgtggTGTTTTCGTGTCCAGTGTGAATGACCTCGAAGTTGCTGTAATTcaccatttatattttaactgcaaaatactgaaaatgtaaatttcgttacctgtgtatatatatataatcctaTATACATAAATCCCTAAGACTAAAGGTTTCAACTgaaaagtttaaatgttttgcacatttatttggAAGTTTTTCCACTTCTTCTGTATTTTGAACATACCAAGTATATGGCCCAGAACGTATCtcacttaaaaatatatgtatttaataaatacatattaataaaagtagCTGATATAACAATCACgtcttaaaataacaaaataaaatatgtgctttGCACATGCATGTGGTTTTGGGATATTTGTATGGTGTAACTATGTGATTATGAGTTTCCCCATAGGGTTTACATATTTCATGTGACTGTACATGTGAAATGTTTCTGTAACTACATTTATGATTCAATTATTTGCTTACTAAAGATACAGAAGAAACAAAGAATTTATGAtcatgtgaaatattatattgtattatacaaAGAGTATATATTGTTTACGTTGCTGACTATTAAATACACGATGACAATGTTTGCCATGTTAGCTTATGCGCCATTATTGTTGTGTGTATTCCCGTCAAATGAATCCAAAGATTTG

Function

symbol description
c1qtnf7 Predicted to be located in extracellular region.

NR:

description
PREDICTED: complement C1q tumor necrosis factor-related protein 7-like

GO: NA

KEGG:

id description
K24218 C1QTNF7; complement C1q and tumor necrosis factor-related protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224930.1 True 2144 mRNA 0.42 4 2234831 2240651

Neighbor

gene id symbol gene type direction distance location
cc2d2a cc2d2a coding downstream 1243 2214388 ~ 2233588 (-)
LOC122328830 LOC107723018,LOC107710237,LOC107669689,LOC107558796 coding downstream 52822 2140832 ~ 2182009 (-)
tcp1 tcp1,LOC107694622,LOC107669694 coding downstream 95556 2133036 ~ 2139275 (-)
LOC122328403 tp53inp2,LOC107668420,LOC107738544,LOC107669700,LOC107723009,LOC107558791 coding downstream 196495 2029050 ~ 2038336 (-)
LOC122328402 ggt7,LOC107557492,LOC107558798,LOC107668417,LOC107669686,LOC107723008 coding downstream 206332 2018370 ~ 2028499 (-)
cpeb2 cpeb2,LOC107723019 coding upstream 5089 2245740 ~ 2268907 (-)
LOC122328840 LOC107669688,LOC107710232,LOC107710235,LOC107570773,LOC107570771 coding upstream 223535 2464186 ~ 2479525 (-)
epm2a epm2a,LOC107718005 coding upstream 461164 2701815 ~ 2714305 (-)
fbxo30b fbxo30b,LOC107718004,LOC107680062,LOC107571806,LOC107687300,LOC107565976,LOC107735267 coding upstream 473846 2714497 ~ 2720029 (-)
LOC122328868 LOC107565964,LOC107571805,LOC107718002,LOC107680061 coding upstream 483190 2723841 ~ 2726856 (-)
LOC122328884 NA non-coding downstream 132673 2099254 ~ 2102158 (-)
G154200 NA non-coding downstream 137823 2096784 ~ 2097008 (-)
G154195 LOC107710236 non-coding downstream 138916 2092748 ~ 2095915 (-)
G154194 NA non-coding downstream 155335 2077564 ~ 2079496 (-)
G154188 NA non-coding downstream 188287 2046323 ~ 2046544 (-)
G154245 NA non-coding upstream 47616 2288267 ~ 2288503 (-)
G154246 NA non-coding upstream 59604 2300255 ~ 2300566 (-)
G154247 ndnf,LOC107549170,LOC107723023,LOC107698518,LOC107710242,LOC107558793 non-coding upstream 60959 2301610 ~ 2304408 (-)
G154277 NA non-coding upstream 239234 2479885 ~ 2480254 (-)
G154278 LOC107549161,LOC107719954 non-coding upstream 239956 2480607 ~ 2480873 (-)
LOC122328833 LOC107669693 other downstream 117948 2102710 ~ 2116883 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other downstream 722502 1507698 ~ 1512329 (-)
l3mbtl1 l3mbtl1,LOC107736954,LOC107564793,LOC107684891,LOC107675169 other downstream 1170057 1053377 ~ 1064774 (-)
vgll4a LOC107675174,LOC107736947,LOC107713758,LOC107684880,LOC107555803,LOC107574679 other downstream 1352647 865477 ~ 882184 (-)
ndnl2 ndnl2,LOC107736943,LOC107568481,LOC107714263,LOC107660884 other downstream 1448952 779085 ~ 785879 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other upstream 528831 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other upstream 546645 2787296 ~ 2798533 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other upstream 628967 2869618 ~ 2874758 (-)
G154446 NA other upstream 684397 2925048 ~ 2957272 (-)
G154445 NA other upstream 684654 2925305 ~ 2951628 (-)

Expression


Co-expression Network