LOC122328874 (LOC107704620,LOC107748451)


Basic Information

Item Value
gene id LOC122328874
gene name LOC107704620,LOC107748451
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 3102068 ~ 3106940 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224933.1
ttagaaatcttggccaACTGAACATGTATGGCATTCAATACTTAGTTGGGGCTCCTTTTGCCTGAAATACTATTATTAGGTGTTATGAGAGTCCAGGCtgctctgatagtggccttcGGCTCTTCTGCATTGTTAGGTCTTATCACATCTTCCTCTTCACCATACCCCATAGATTACCATAGTCCTCAAACCAGGTActggtagctttggcactgtgtgcaggtgccaagtcctggtagaaaatgaaatctgcatctccataaGGTTGGTCAGCAGCAAAACGTCCTGGTATACGGCTGCGTTGACcttggacctcagaaaacacagtggcACAACACCGGCAAATGACATGaaccccaaaccatcactgactgtaGAAGCACACCGGACCTCAAGCAACGTTCTgtgcctctcctctcttcctccagactctgatttccaaaggaaatgcaacattttcttTCATCAGAGTACATAACTTTGGCCCAGTCAGCAGCAGCCCAGACCTTTTTGTCTTCAGCCCAGATGAGAAGCTTCTGACACTGTCTGTTCAAGAGTGTCTTGACACAAGGAATGTGACGGCTGAAACCCATGTGTTGCATACATCTGTGTGTAGCGCTTCTTCaagcactgactccagctgTAGTCCACTCGTTTTGAATCTCCCCTACATCGAACGGGTTTCGTTTCACAATCCTCTCCAGGGTTTCACATCCCTATTGcttctacatttttttctaccacatcttttccttcccttctCCTCTCTATTAAAGAGCTCTGTGAACAGCAAGcctcttttgcaatgaccttttgtgtcttgccctccttGTGCAAGGTGTCAATGGTCGTCTTTCGGACGactgtcaagtcagcagtcttccccatgattgacTACAGAACTAGACcgagagaccatttaaaggccttcgcgggtgttttgagttaatcaGCTGATTGGAGTGTGGcatcaggtgtcttcaatattcAACCTTTTCGcaatattctaattttctgagatactgaatttagGATTTTCactagttgtcagttataatcatcaaaatgacaagaaataaacatttgaaatatatcagtatgtgtgtaatgaatggaattagtgaaataaatcaactttttgatgatgttctaattatatgaccagcacctgtatatGTGTTTCAACATAAACCATGAGTTTCACTTTGCGgactctctctccatctctctctctctcagctttAATGTAATTTAGTAGCATTAAACCAAAGAGCCATCCCTGACATGATGCAGCTTCGAAAGCCCCGATGAAATCCATTTGACAAAACTCCAGAGACTCTTTGCTCATGGATGGggtttaataattcattcagcGCAGTTTATTCTACAGATATATCTTCTTTCTCATGCTCAAGTCCGTTGTGTTATTGTTTTCCAGTGCTCTTTATACCCTGCAGATTCATCTGCGCAGCATTGTTATCTTGTCGTGGCACAGTTTTGGTCCTAACAGCCAAACTATTGGTCGACTGTGGCACGTGTTCATCTCAGATCGGACCGAAGTGTCAGGAGACGGGGTGCTGGAATCACTCGAGGTCTGGTATGATTTTTCTCCATGTCCGTAAGCTTTCGTTTCCATCCGTGATTGCGTTCTGCAGAATGAGCGAAGCCGTGGCGAGCGGGGTGAGAAGGTTGAGCACCATCTCGGAGCAGGACGCGGATGCTGGAGCGGAGCCCGTGTCCCTCGGGTCCTCGGGGGACGGCGAGTGGGCAGGATCCAGTGCTTCGCTCTGCTCGCGGGGAAAACCCAGCGTCCAGAGCAGCACCTTCACCTCCTTTGAGTCCTATCAGCCTGACGCTGCAGATGACTGCGCCTCCATCCTGCTGGCTTGTCTCTACTGCCGCTTCTGTGACGTGATGGCCATGCTTCCCGACGCTTGTGAGCGAGCGCTAGGCCGCTGCTTCCCCTCGTACAGGTATTACAACACCTCGGATGAGCCGTCCAAAGGAAAAGACTGGTGCGGCTGCAACGTGGATTTTGACTGTGGTTTCATGAACTCCTGTCAGGAGGCCAGCGAGCTGATCGAGCTGGCCATGGAGATATCTGAGGTCTGTTACCGCTGAGAGCCCCGAAATCTTGCATCCCAGATTTTTGCATGTTGAAAAATACATAAGGCCAATGACGTTTAGACACGGCCTCCGACAGGTTCGACCGTTAAAAAAATTGGTTCGATTTTCAgcattttgggctttttttgcAAGCGTTTTCATAAAGGATGACGAACGTGAAAAGTATGAAAAGCGTGTGCAGGGACCTTTACAGCTATTCGTTGTCACTTAAGACATTTGTGGTTTCACGCGGGAGAAACCAGGGTAAATGTCACTTCTTGTTTTAGGCGACAAAATAAAGCATGACCCTGCATTTTTTTAGGATGAGGTCCTCATTTAAAGGAAGTAGGGTGAATATATTTGCAGTACAATTTATTTTGCAtccaaagttgaattttcataCAAAATGATGACTTTACTGACGCTCTCATATTCCCGTACGTGACGGCTGAACCAAAATGTGAACGTTGGGCTCATCTGTTatgtaaagcatgaaaaatCATCAGTGTGGGTAAATCGAGCCAGTGGCCACCTGTGTGATGCATAATTGATTGTAACAAAgtaaaaagctttaaatgtcTTTCTGTCTTGTGATTTGCTTAAGACCGTTAAAGGTCTGAATATGGTACAAAAAAACCAGAAATCAGTTTGCATTTAgatacatttagttttatagttttgaattagtttttggTCAAATGCCTGTAACACTTTACAACTCCTagattataaataaactatgaAAGAGTTGTCGAAGCTTAATGCTGGTGATGCTGAAGTTGGTGTGCTTGAACTTTTTACTTCTAGTGTTCGTATTTAGGCTttaaaattcaataataattctGTAGCTCTGAAGATTATCTGGTGACGCTTAGAATACTGTtccttaatattaaataactgcGAGACAAATTACTAATGCAGTATTAATGTTTTGGTAGCTACTGTTAACTCcaattaacaaattattaacTGACTTGAATGTGTTAgctttttcttcacaaaaatGGCAAACAGTTATAATGTTGTCATGTTTTCTATGCAAATAACgcataaataattctaaaat

Function

NR:

description
PREDICTED: myoD family inhibitor domain-containing protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224933.1 True 3175 mRNA 0.43 2 3102068 3106940

Neighbor

gene id symbol gene type direction distance location
LOC122328867 LOC107558923,LOC107687304,LOC107709232,LOC107748446 coding downstream 2180 3095063 ~ 3099888 (-)
frmd4bb frmd4bb,LOC107558919,LOC107687288,LOC107709245,LOC107704625,LOC107748434 coding downstream 39996 3014616 ~ 3062072 (-)
LOC122329166 LOC107571805,LOC107718002,LOC107687299,LOC107748429,LOC107565964,LOC107680061 coding downstream 342946 2730822 ~ 2759122 (-)
LOC122329165 LOC107571805,LOC107687299,LOC107565964,LOC107718002,LOC107748429,LOC107680061 coding downstream 372572 2726830 ~ 2729496 (-)
LOC122328868 LOC107565964,LOC107571805,LOC107718002,LOC107680061 coding downstream 375212 2723841 ~ 2726856 (-)
tmem106c tmem106c,LOC107697039,LOC107704621,LOC107558924 coding upstream 67 3107007 ~ 3113429 (-)
LOC122328875 LOC107709230,LOC107558910,LOC107696973,LOC107704617,LOC107554205,LOC107748447 coding upstream 7752 3114692 ~ 3120743 (-)
LOC122328862 LOC107709224,LOC107558908,LOC107704618,LOC107696950 coding upstream 13922 3120862 ~ 3128222 (-)
hdac7a LOC107704627,LOC107709222,LOC107752451 coding upstream 35343 3142283 ~ 3206411 (-)
LOC122329174 NA coding upstream 181183 3288123 ~ 3298955 (-)
G154525 NA non-coding downstream 88887 3011419 ~ 3013181 (-)
G154519 NA non-coding downstream 92590 3006483 ~ 3009478 (-)
G154520 LOC107709225,LOC107565972 non-coding downstream 104104 2996765 ~ 2997964 (-)
G154443 NA non-coding downstream 151410 2925204 ~ 2950658 (-)
G154444 NA non-coding downstream 169831 2925010 ~ 2932237 (-)
G154663 NA non-coding upstream 525419 3632359 ~ 3633333 (-)
G154671 NA non-coding upstream 548346 3655286 ~ 3655596 (-)
G154672 NA non-coding upstream 549348 3656288 ~ 3656543 (-)
G154684 LOC107746508,LOC107696966,LOC107559163 non-coding upstream 565739 3672679 ~ 3673581 (-)
G154687 LOC107559166,LOC107559158,LOC107746523,LOC107696944,LOC107696945 non-coding upstream 585997 3692937 ~ 3693265 (-)
G154446 NA other downstream 144796 2925048 ~ 2957272 (-)
G154445 NA other downstream 150440 2925305 ~ 2951628 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other downstream 227310 2869618 ~ 2874758 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other downstream 263021 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other downstream 303535 2787296 ~ 2798533 (-)
LOC122328836 LOC107566068 other upstream 327184 3434124 ~ 3445964 (-)
tspan2b tspan2b,LOC107709234,LOC107696969,LOC107746340,LOC107566064,LOC107673514,LOC107554202 other upstream 395325 3502265 ~ 3518142 (-)
lad1 LOC107746516,LOC107696941,LOC107559160 other upstream 788026 3894966 ~ 3905892 (-)
LOC122329268 LOC107707377,LOC107673205,LOC107746501,LOC107697018,LOC107601321,LOC107598138,LOC108443130,LOC103026736,LOC106572423 other upstream 1066974 4173914 ~ 4194998 (-)
LOC122329181 LOC107601337,LOC107697001,LOC107723119 other upstream 1720538 4827478 ~ 4834520 (-)

Expression


Co-expression Network