LOC122328901 (LOC107549209,LOC107689901,LOC107738870,LOC107681562)


Basic Information

Item Value
gene id LOC122328901
gene name LOC107549209,LOC107689901,LOC107738870,LOC107681562
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14905836 ~ 14933006 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224968.1
AGTAATTTTTGAGCAGCGGAGGAAGTATTTGGACTTAAAAAGCGGTTCACTTTCTAATTACATGTCATATTTCAGTAAATGaaaagctgttttctttttccagatggCCACAGAGGTGTTGGAGGATCTTCTGGAGGAGGATGACGAGGTTGTGGAGGTTTGGTATCTGTTAGGATGGCTGCTTTATTTGCAGCTGGACAAACAAGACTTGACAAACAACGGTGTGAACTTCAGAAAATCAGCTTGGACGTACCTTAGCAAGGCCAAAAAGCTGTATGTGAAGCTGCGCTGTGAGGACTCACCCATGTTTGAGCATACGGAGCAGCTGTTAGCAGAGCTGGGTGGTGAAGAGCATGgggctgatgatgatgatgatgatgaagccGGACCATCTGTAGACAACATTGACgatgattttattcaaagcagCGATGAAGATGACGATGCCATGGATCACTGACTCAACGTTTTTCACTTGCTTATTCTAATCGTCATCCGTGGACTCGTCCAATCAGAATATTAAACTGAAAGCAGATGGCTGATCTTCACAGTCTCTCTACCAGTCACTTTTCTTTTCCCCTTCTATTCCAGTTTGATATGTCTGACTGGGATGTATTTTctgtttgcttagtttttttttgcatgctgagACTACAAACCATCAGGACATCTGTCACACTGATCTGGACACTGATCAAGATGCTGTTTcataataactttaataacagttttataaatgttacaaagcacaaaaagtatcataataaaaacaaaaaatccaaTAAAGGCATTTCTAAtaccattaaaaatatatatccataaaacatgcttaatgtttttattttttcagattatgttttgttttagcgTATGAGAAATGCATTGGAACtgaagtattttaaaacaaacaactaaatGCCAATACAAATGTTTATGTCTCTCTGaaatggtgatgatgatgataatggtGTGAAAACATCGTCTCATTCTGACTTCATTATGACTTTAGCTCTTTTGTAATCGTAATCAGTCATAATCCGGAATCTGTGCAATGAACCCACTAGCTGGAAGAAATTTCTTCTCAAcatagttttgtgtttgtttatgtcaTTCCCTTAATGATGAACTTAAGGATCATTTTGGTTATGGATttgcaaaaatagttttgtttatcTTGATGCAGACCCTAGAAATGTATCATTATAATGCCACCATCATAATACAGTACATTATGACAATGAGccttgatgtttgtttgttttgtacttTCCGATGGTCTCCGTCTGTCCTCCAGCTTTCACAGAGAACCGTTTTTATGGACTGCTTCAGTTTTTCCCATCAAATATTTCAGAGACACTAGAGCAAGCCTCCTGAGTTCAAACGAGACATTTGGTTTCATTTTGTGAATCCTAAGCAAATCTCATAATCCGATCGCACGAGGCCTGCCGGTTCCCAGCCCTAATGAAGATTCTCAAGTTTTAATTAAGCTCATGGACTTTTAGCTTCTCAGAGATGGAGAGTCTGGATGAAATATAGTCATATTTTGACTAAGcaatcttttttccttttttgcaaCAAATTTTTCTTCTGCCCATAAAACCAGTATAACCTCTTTTATACGTTTTGGGCCTGTAggattctttgtttttttttttttttttttactccttcCAAGAATGCAATATATTTGATCGAGAACAGtcaaaacggtaatattgtgaaatattattacaataaaaaaaaaaaacgatttgaATATATTTCCTGACACATTCTGTGGTTACTTTACAGCAAGGCCTTAGGTACTGTGAACACCTTAATTCGTTCAAAACGAGAGGCCTCTGACAGACATTTTACACAGACagagcatgttttattaattcactGGTAACAGCGACAAGAAGGGAAATGACAGAAAGCAGAACACAAATGTATGAATGAGAAACATTTATGCTAAAGCATGTCAAGGTTGAGACACCGTATGTGTACTGATAATTCAGtgatatgtttaataattccTGAAAGAAAAATGAGTGTGCTGGCTGCTAAAATAGATGAAGCCTCCTTTATACTTTGTTCTTCACAGTCAAGGCCGTTACGGGAAGCTCCCTTACAGAAAGTCACAAGAAAACAGCAGCCAAATGGGAGATCGATGACAAATTGGTCACCTGAATAGCAGGTCTAACTCACAGAGAAGTCGCAGTGTCTGTACTTGTCAGGTCAGTCTCAGTGATACATTTAGAGCCAGCTTTTCTCCTGAGGGTCAAGATTACGCCTTGTACTGGTCTGATTTCAATTATAAAGGCTAGTCATCCATTTACCCTCAGGATTTGGCAATACAAAGCTTAAATGTCAAAAGGCTTGTCACTTTTTGATCACGAGGCTGTATGTAATGAAAATGGAACATGGTTGAATCAGACAAAACCAGCTGCCGTTGACGCCTTTATATTCGGTTGTCATCACTAAACAAATTAATTCTCACTTACCAGCAGCTTTCCTgtcaattttatgttttttgagaGAAATTTGATGGCATGCTGTGCCTTATGGGTAATATGCTCCCACGAGTTCTCTTGCTTTGTTGACTCGTCCCCTCATCCATCGAAGGGTCGATTTTACACTTGGGCTTTTAGAATAATGGAAAGGCACTTAAGATGGCAACACGCTTTCCACCGGGGAGAAAGCAGCATGAGGAAGAACATCGAGAACATGTTAAATTGCGTTATGAAATAGGGCTGTGGAGTAAAAGTGTCAAGGGCAAGACTGCTATTAAAATCATCTAAGCTAAGGTTTAATATCTGTTAGCCTCATTTTGAGGTAGGAGTTTTCTGTCTGGACAGAAGTGTACTGTAATGTTGCTTCTTTCACAAATGCGGTGCACTTTGGTGTCCTATGACTTTTCTAAAAGCAGTAGAAACACAAACaccatgcttttattttctgaCCTGTTACTGTAGATGTGTTTCataatgtactgtattataACATAACTTTTACTTGGCATGAAAAGTAGCTTGTTTTAGACATCGTAAAAAATAGCTGAGCCAAGTTCTATGACGTGGGACAGGCCAAAACCTCTATCAAACAAAAATTAGAACCAATCTAAACGTATCAGTAGCTATGAACCAACATTTAGCTACTACTGACTATTTTGGGCTATGTTTATAGTTTTCATAAATCTCACATTTTGGCAATAAGGTTTGCTAACATGAAGTACATGAATATAACAGATTATACTTAATTTGGGTTGATAGCCATCTGAAGGTTTATGAAGGtcctgttttaaatataaatgataaaattaaatataatatttggaCAATGTTGGTAACCAAGCCATTTTGGTGATCCTTCTGTTGacttgttttttagtttttttctccagtggggtaaaaacaaataaaatctaaaaccttcttatgttccacagaataaaGTAATTCTCATAGAGCTTTGAAACAATATCAGGACCCCTTTTAGCACCATTtgttaaaaagagagaaaaaaaaaaacggcctATTTTGTATCATATTCATGGAAAGTGCCATTTGTGGTTTTCCCTGTTACTCTTCACCATCGCTGTATGGCCTCGGGTTATATGGAGGATTGAGTAGAAAGGCTGAAGCACATTAATAACAACTCCAATGACTAATGAGAGCTCGGCTGGAATAGgagatatttttggttttgtgtcAGAAACTCCTCTATGGCATACTGTATGGGTTTACTGGCGGTACAGCCTAATACGCTAATTACCGTTTTTTCCCTGGAACTAAATGAACATGGAGCTCATTTGTTATAAGCTGAACTGCATTAAAGTACAAAAGTACTCTATAAAGCACCTCTAAAACTCAATTATATACTGTACAGGTAATTAGTGTTTTTGCTAAGAGGAACGGAGCTTGTGTAGATAAGGCGTTACTGTATAGACCTTCAATATTTTCTTCTTAGTGATGTCTTCTATGTTAAGTTAAAGCAGTCGATGTTGCCATCAGTTTTAATTGCAGACGTGCTCTATCAGAAACAGTATCAGCTTCGTCTTAGCTCCTGGAAGGCATGGGAATGGGATTGTAGAGAGAAagcaaaaatctaattattcaGTCAAATCAAAGTACTCCTATTAAGCAGAAATTGTTCAGAGAGATTCTTTGTTTTGTTACGAACAGATAATCACTCTTCACTCCACAATCAAATTATGCTACTGTTGTTTATTCATTGCCtcaagtttttaatttaaaactgcttttgttttcaaGAGAACGGGCTTTTGTTTATTGCTGGGAGTCCAAATATTGATGGTGAGTTTAGATCGGTTCTTCTTCAGTTCAATTTAGCAAGCCGAAGGCTTCTCTAAGAAGTCAAATAAGTGATTTTGGGGCTCACGGCGTGCCAGAACCTCTTCAAACTAAAGCGACTAAGTAAGTGGATACAGATTAAACACAGCTGAATTTCAAGTGCCTGTCAACAGTCTCTCTCCCAAATAATCTGCCTCATCTCTTTGAAGAATTCACATTCAACCATGTGGGAAAATAATCTTAGAGCAGAGAGATCCTGGCACAGATTAGCCTCTGGCATATTGGAATTCTAAACACGCGAATGGAAGAGAAGCCACGCTTTGGAAAGGTTTTCAAGGCAGTTTGTCCTCAGATAAGTCTAGATAGAGGGATTGTGGAAGTATAATCCGAGCACCATCATGAGCCCTCCTAACATTCTCCTTATCAGACTCGGGCTGCGCACCCACGGAGGCTTTATTTCCTtacagaatgagagagaaacaaGTGTGACCAACATCACCGGAGGCGGCACAGGTTCCAGCCGAGCAGAACTTTCCAATTACCTGATACATGGGCATATAAACAGAGAGTTAGCTCTGTTTAAGCCGGCAAGTTCCTTAGAGATAAAGACAGATTCTAATCTCTGTTATTGTGTTCTTAACCTTCACTTTTCATGTTTTACTAGCAGTAATCCTCCACTGAGAGATGCCGATAACAGTGATAATGATGTACAAGCTAAATGCAACTTTAATGGCTTGCACTGACTGAAAAACAAAGGCTCAGATCTTCTGTTTCAAACTAAACATTGGTCCTGTGTGGCTGAGGGTGCAGAAGTGCTAATTAGATTTATAGACTGAAGGGGACCTCTGAGAGCGTATGAATCATCTGTAATTTGATAGAAAATGTGATAAGACTCGCACAAACatcatatttgaataaaaggttccacaaaagaaaaaaaacactagcaaAACGATAGTGTTTTGAAAgctttttaaagccatttttatccAGAACGCTGTCAAAGGATTCAGTGTACAGTTCCTTTCCAcataattctctctctctttctttctttcactcaaGGTCTGTCTTTTCAAGGTTATAAGCAATTTCTGCATTCCCCCTCTAGTTCTGTGAAATCTGATATGGCCGTATCTGTCCCTGACCGATCTCAAGCGTCTGCGTTGTACATCAAAACAAGACAAGCACTCACTGACACTGTCCATGAGTCATCGCTCTCACAACCTCTCTGCCCATTTCTCCTATTCTCTTTTCGGTCTAACGTATATATTCATCTTATGTGATCTATGTCAAGGGAAAGTGTGaaactcatttttttgtttgagcgTCGGCGAGTGTAACTGTGCAGACATTCCCTGCAATATGAGcatcacacatttaaacatagaatatatatagacagaatttttgaagaaattgtACATTCATTACAGCATtgcataaatgaatacatgtaaaaagaaactttataatgtaaaatgtaagctacatttaataagtaataaacgttttacaatgcattttgaTTTTCTTCTAATAGTCGCACTCAAAAAAGTGACTATTTCCAGATCACTAATCAAATATATAGTTCACTCATACGTACAGCTGTGGTCATTATGACAGATTCATTACAATATCCAGGATGGATATGTACGAGCGGCTCTTAATGGATCTATCCATTTTAATTGGTAAATGTAATGGAAATGGAGCCCTTTCTTATAAGACTTCATAAAAGTCTTGAGTCGCTTGTTCAGCCTGACTAACCAGTTTTGCTCATATTTGTTGTGCACACAAGAATAATATTCTTCATTTCACTGTCAGCGCTTCTGCGGTGATGAGAACAAAGgcAGGGTTATGAATAAGAGAGTGCAGCGATGGCTACTTGTGAGGCAAGTGAATTTGGAGTCCCGTTTCTCTTTGATTTGAGGATTGTGTTACTGGGAAACAGAGCAGCAGGGAAAACCTCTTTGGCAAACCTAATAACAGGTCACGCAGAGCCTCATCTAAGAAGAACGGCCCAGTGTGTGAAGATGCATGGAGATTTTGCCGGAAGGCAGGTCACTGTAGTTGATACGCCGGGCTGGTGGAAGAACTACCTTGTCAAAGAAACCCCTGAATTTCAAAAACAAGAGATTGTGCTTAGCGTAGCTCATTGTCCTCCTGGGCCCCATGCCGTTCTGCTGATCCTACGTGTCGATTCTTTATTCAAAGAAAAGCACAGGAGGTCGGTGCAGGAACACCTTGAACTTTTGAGCGAGAGAGTCTGGAACCACACTATAGTTGTGTTCACGTATAGAGACCAGCTACAGGAGCGAACTTTAGGAAAGTACATTGGAAGTGAAGGAGAGTCTCTTCTGCTCTGGCTAGTGGAGAAATGTGGACGTAGATATCACGTTCTTAATACCGAGAGAGCCACCGGTACGCAGCTGGCGGGGTTAATGGACAAAATAGACACGGTTGTCGTGGGAAATGGTGGCTGTCATTTTGAAACGGACAGAAAATGGATGCATATGGTGGAAGGAATGATGACGAAGAGATACATGAGAGCAAACCAGAAAAGGAAGATGGTGCAAGAACAATGGGAGGCTCCACTTGTACGACAAGGTCTCAAACATGTCCACATTCCTAAGATGAGGATGGTAATATTAGGTTTTCGAAGGTCTGGGAAGAGTTCGGCTGGAAACACCATTTTGAGTGTGGCGACATTCATCTCAAAGAGTACCTCCGCGTCTGTGAGAAGACAAGGCGAGGTGGATGGAAGGCATGTGACTATAGTGGACACTCCAGGCTGGTGGAAGTCTCTGCCAGCAGCTGACACTCCTGAACTGGATAAAGAAGAGATTTTCCTCAGCATGTCTCTCTGTCCGCCAGGACCACACGTGTTTCTGCTGACTCTGCGTGTAGATGTGTCATTCACAGCAGCAGAGAAGACATCAGTGGAGCAGCACATGGAGCTTCTGGGCGAGAGAGTCTGGGCTTACACCATAGTGCTTTTCACCCATGGAGACTGTCTGGGGGACGTGACTGCTGAAGAGTTGATTGAGAGCGAAGGGGAGGCTCTGCAGTGGCTGGTCGAGAAATGTGGGAACAGATATCATGTCCTCAACAATGAGAACTGGAATGATTGCAGTCAGGTCACAAACCTGCTGGAGAAAATAGAGAAGATGGTGGCACAAAATAAGGGCCATTATTATGAAATTGACCTCAAGACACTGAAGGAGGTGAAGCAGAAAAGGAAAGCAGtggaaaagaaagcaaaggcaagagcaaagaaacaaaaacagatgagGGTGATGGACAATACATTGAAGGATTTTCGAAAGCATTTCTACGAATTTTGTCTTGTGCTGCTGGGTTATGGAGAATCTGGGAAGAGTTCAACAGGAAACACCATCCTCGGCAAACAGGTGTTTGGGTCGAGAAGAACAGCCCGGTGTGTTCAGAGACACGGAGAGGTCGGAGGACATCGGGTCAGCATCATAGACACCCCTGGCTGGTGGAAACATCTGCCCATAGAACAAACCCCTGAACTAAATAAAGACCAAATCACGCAGAGTGCATCTCTATCCGATTCTGGACCAATCGTTTACATTTTGGTCCTTCGTGCCGACTGTTCTTTCAAAGAGCAGGAGCGGAAGGCGATGGAGGATCATTTGAGGCTTTTGGGCTCCACGGTTTGGGATGACAGCGTAGTTCTGTTCACATTTGGGGACGTGCTCGGAGACAGAGCCATCGAGAAGCACATTGAATGCGAAGGAGAAGCTCTGCAGTGGCTTGTTGATAGATGCGGAAACAGgtatcatgtttttaataacaagGCCGAGGGTGAGAGCCATCAGGTCGCAGAGCTGCTGGAAAAGATACAAGAGTTGACTGCAGCAAACAGCGGGTGCAGTAACAAAGACATGCAGGTGCTGCGGGAGGTGACGGAGGGGAGGAAGGTGGAGGAAGACAGAGCAAACACCAGACTGAAGATGCAGGGACAAAGAGAGGAAGATGAATCCGATGATGTATTTGATGATGGCGAAGATGATGAAGTCATTTGGGACTCGAGAGCATGGAAGTGGACGACAGCTGTATGAGACGAAAAGTTGGgaaatcattttcagaattagtgcttttgttttgttttcatgtagaaatctttaattatttattattattattatatatgctgtcaaatgattaatttatatattcatttaatttattcatttatacata

Function

NR:

description
PREDICTED: GTPase IMAP family member 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224968.1 True 8522 mRNA 0.40 7 14905836 14933006

Neighbor

gene id symbol gene type direction distance location
LOC122328919 kcnn3,LOC107723559,LOC107657645,LOC107699550,LOC107714686,LOC107595057,LOC108280396 coding downstream 97059 14772091 ~ 14808777 (-)
LOC122329128 LOC107737536,LOC107673093,LOC107716130,LOC107591120,LOC107687434 coding downstream 181611 14717745 ~ 14724225 (-)
gdi1 gdi1,LOC107564645,LOC107737502,LOC107673075,LOC107716167,LOC107574690 coding downstream 226605 14672277 ~ 14679231 (-)
ada ada,LOC107574722,LOC107737507,LOC107673052,LOC107716171,LOC107564650,LOC107695842 coding downstream 269511 14624253 ~ 14636325 (-)
LOC122328465 LOC107737694,LOC107673066,LOC107568406,LOC107668342,LOC107564659,LOC107716177 coding downstream 336178 14564464 ~ 14569658 (-)
LOC122328916 iqch coding upstream 116360 15049366 ~ 15073882 (-)
LOC122328908 smad3b,LOC107686302,LOC107738715,LOC107583760,LOC107672260 coding upstream 145580 15078586 ~ 15092247 (-)
LOC122328567 LOC107668556,LOC107570149 coding upstream 262111 15195117 ~ 15197461 (-)
LOC122328911 LOC107570149,LOC107668556 coding upstream 383721 15316727 ~ 15324022 (-)
LOC122328900 rsbn1,LOC107668555,LOC107570136,LOC107737499,LOC107716162,LOC107564641,LOC107695834,LOC100330644 coding upstream 406053 15339059 ~ 15347198 (-)
G157999 itga8,LOC107689880,LOC107717802,LOC107681583 non-coding downstream 60158 14836361 ~ 14845678 (-)
LOC122328920 NA non-coding downstream 74987 14830264 ~ 14830849 (-)
G157966 mef2d non-coding downstream 176174 14651424 ~ 14729662 (-)
G157906 NA non-coding downstream 444819 14326384 ~ 14461017 (-)
LOC122328921 NA non-coding upstream 255142 15188148 ~ 15189638 (-)
G158014 NA non-coding upstream 269360 15202366 ~ 15203950 (-)
G157984 NA non-coding upstream 277222 15210228 ~ 15338843 (-)
G158019 NA non-coding upstream 362882 15295888 ~ 15296636 (-)
G158024 si:ch73-206d17.1,LOC107571682,LOC107726152,LOC107695830 non-coding upstream 543481 15476487 ~ 15477769 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other downstream 316214 14570347 ~ 14589622 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other downstream 575052 14326966 ~ 14330784 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other downstream 672785 14222809 ~ 14233051 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other downstream 1623509 13280256 ~ 13282327 (-)
G157367 NA other downstream 1688428 13141078 ~ 13217408 (-)
LOC122328913 zgc:162898,c4h15orf61,LOC107738714,LOC107686305,LOC107583911,LOC107718314,LOC107596966,LOC107672207 other upstream 114146 15047152 ~ 15048344 (-)
magi3a magi3,magi3a,LOC107695739,LOC107564661 other upstream 414411 15347417 ~ 15474390 (-)
LOC122329227 NA other upstream 688936 15621942 ~ 15717250 (-)
G158231 NA other upstream 1075100 16008106 ~ 16008915 (-)
G158288 LOC107708856,LOC107570569,LOC107716212,LOC107681953,LOC107695729 other upstream 1210827 16143833 ~ 16169834 (-)

Expression


Co-expression Network