LOC122328919 (kcnn3,LOC107723559,LOC107657645,LOC107699550,LOC107714686,LOC107595057,LOC108280396)


Basic Information

Item Value
gene id LOC122328919
gene name kcnn3,LOC107723559,LOC107657645,LOC107699550,LOC107714686,LOC107595057,LOC108280396
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14772091 ~ 14808777 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225000.1
agagagagagagagagagagagagagaaagggaatgAGAGACGTGCTGTCAGAGTGAGAGCTGGAGGACATGCATCCATTTCTACACAATATCAGACTATCGCTACTTTCACCGTTATTCATATCCAGATGCTACTTTAAAGCGCTTTTCTTCACATGAGGCGAATAATGGTAATTAACACAACGGGTGGATGTATTTcctgaaatattaaacagcgCACTAAATCCCTTTCCCGCAATTTATTTTCCGCTTTTATTTGGATCCTTGTTCAGGTGTTAAACGCAACAGCTTTCGTCTGTAGGAGTCTCGTTTTAAGAAATAGCGGTTTATACTTCTGTCGTTAAAAACCCGGAATCACTGCTTGACAACGGAGCGGAGAAGAAACGCTGGCATGATTTTGacaacatgaaaaagaaaaagtgtggAGGAATATTGTTGCACTGCTTTTGAAATCACCATATGAAGGTGGAGATAGACTGACAGGAGAGAGAGTTGAGGAGCAGAGCACAAACAAAcctgctggagcctggttgcCATGGATCCCCCTCCCTCTCTGAGTCTGGCCCTTCTCAGCGGGAGCGAAGACGAAGAGCAACGTCTGCCCCTCCCTCTCGGTGGTCTCTCCCATGCCTCCCTCTCTGGCAACTACCCTGGGACCAACCACTCGAATCACACGGGAGGCAACAGCAGCCTGGAGCGTCTCAATGGCACTCCGTCGCCCACCACGCCAAACCTTCCCCCGGCATCGCTGCCCAAGTTGCCCCTGTCCACAACACCCCAGCTGTCCACGCCAATCCCCAACGCGCTCCACCCCACCAGCACGCCGCTCTCCTCCTGCCTGGGCAGTCAACACAGCCTAAGCGGGGAGACTTCGCCCGTCTACAATGCGCTGTTCTACTCTTCTCATTCGCCTTCCACTGAGCGAGAGCAGAGGGAGCGAGAGAGGGGGTGTAAGCACAGGCAGGCCAGTCCCCTGGTGCACAGGCGGGACAGTAACCCCTTTACCGAGATCGCCATGAGCTCGTGCAAGTACAGCGGCGGTGTGATGAAGCCACTCAGCCGCCTCAGCGCCTCCCGCCGGAACCTCATCGAGTCCGACAGCGGAAGTGACACCAAAGAGGGCGGGGCGAGCGTGAGCCAGGCGACTGCGGCCTCCTCTCAACACAGTCAGTCGCAATCCCAGAACCCCCCAGAGATCGTCATCTCCTCGAAAGAGGATGCGCCTTACGGACACGCTTACGAACTCGAGGCCTCGGCCAATCAAATGTCCATCTACCACCAGAACCACGCCCTCTCTGACAGCAGGGGGGTGCTTGGGGGCGTGGCTGGGGGCGGGACTAATGGAAGGAGGGGCGGCGCTGTCGTGGGAGGCCCGGGAAGGACCGCTTCCAAAGCCCCTAAACGTAAGAATCAGAACATTGGCTACAAACTAGGCCACAGGAGGGCGCTGTTCGAAAAGAGGAAGAGACTTAGTGACTATGCGCTCATATTCGGCATGTTTGGCATTGTTGTCATGGTGATTGAGACCGAGCTGTCCTGGGGTGTCTACAGTAAGAGCTCCATGTATTCACTGGCGTTGAAGTGTCTTATCAGCCTTTCCACCGTCATTCTTCTTGGACTAATCATCGCTTACCATGCTCGAGAGGTGCAgCTCTTCGTCATTGACAACGGTGCGGACGACTGGCGGATCGCCATGACCATGGAGCGAGTGCTGCTTATCGCTCTGGAGCTGATCGTTTCTGCGGTTCACCCGGTGCCGGGGGACTTCAAGTTCATGTGGCGGGCGCGACTGGCCTTCTCCTACGCTCCCTCGCAGGCGGAGGCAGATCTAGACATGGTGCTGTCTGTACCCATGTTCCTTAGACTCTACCTCATCGCCCGAGTCATGCTGCTACATAGCAAGCTCTTCACCGACGCCTCCTCCCGCAGCATAGGGGCACTCAacaaggtGCATTTTAACACACGGTTTGTGATGAAGACCTTGATGACCATATGCCCGGGCACGGTGCTGCTGGTCTTCAGTATCTCCCTGTGGATCATTGCTGCCTGGACCGTaagagtgtgtgagagATACCATGACAACATGGATGTAACCAGCAATTTCCTTGGAGCCATGTGGTTGATCTCAATAACTTTTCTAACCATTGGATATGGGGATATGGTCCCCAACACATACTGTGGGAAAGGAGTCTGTCTCCTCACCGGCATCATGGGAGCCGGATGCACTGCTTTGGTGGTCGCTGTGGTCGCAAAAAAACTGGAATTAACCAAAGCCGAAAAACATGTACATAACTTCATGATGGACACCCAGCTGACAAAAAGGGTGAAAAATACGGCTGCTAATGTACTCAGGGAAACATGGCTaatctacaaacacacaaagcttGTGAAGAAGATTGACCATGCCAAGGTCCGGAAACATCAGCGCAAGTTTCTGCAGGCCATTCACCAGTACGTATTTTTTCTGCGACATTTAATCTCTATAATCTTCCTTTTGCCACATGCGCCGTCtggatttgtattttatatgagATCTGatataaatctacattttatgGTGCTTAAAACTGGATTTAGTTCAAGTTCTCGCTTTTCAATTTAGAGAATCTACTcacataaagttttttttttattttttatatggaGTTTTGGAAACGGAATCGAACCTTTTAGACTGAATAGACTGTACCTCGTATTTCTTTTCTAATTTATTGCCACTGCATTTCTAGATCTTGGGAGTTTCACCTGTCTGATCATGCGATGAAATCTTGATGCTGatgatgcagaaaataaaagaagttAGGGCTAGTGCACAAATTGAATATCAGACGTAATTGTGTGCATAAATAACCGAATGcaatttttggttaaaaatgactGTCTTGGCgagatgcttaaaaaaaacataatagttCTCACAATATTAATCCAGTGCATTGGAACTTAAAGTGTAAATGCAGCATGCCACTGCTTATTATCATGTTAATATTGATCAAACAGTAATTTTGGCAAAGAAGACTGCTGCTAattatttctttgttctttattGCTGACTGTCTATTTGTTTACTTAATTGAGATGTACTCAAAGGCTTTATGCCGttgctttatatttaatttcttaagtAAAAGAATGTGTTTCATTGCGTATTAGTTTATTCTTTGAAACTTTTATGGAGCGTAATGAAATATCTTTGTTATTGTGACATCCCTAGTGTCGACAGTAACTTGGATGCATGAGAGAGATGTTGTTTTCCCATATTGTTCAATATGATGAGAAAAANTAAGTTACACAAAAATGTTGCTTAAATGGCCTGGTGATGGAAATCGAATTACAgggctgttgttgttgtttttttgtttcaagtcagttgtaaaagttttttggTGTAGTGTGCAACttgaggtttttaaaaaatgtattctgtgtTCCATTTGTTTTGCCTTAAATCACTGCAGAGCTCAGAAGTAAGTCATGTCTTCTCTTTTTCCTTACATTTGGaaccctttttcatttttataagtcTTATTCAGCAATATCAACCAACATGATGAACATTGCAAACGTTTGAAGCTGGGCACCATTTTTATTAAGCATTGATATCCATTAATGGTGTTTGgatgaaatacatttacatgGTATACCAACCTGTTATGGTACTTGGAGGGAAAGGTTCTTCACATCTTCTCAGCTTCAAATTTATCAGATGCCACAATGTCAGAAATTCATTCATCTAGCCTGTACCAGATTTCCACAGAACCTCGCACTGCACTTTTAGTCTTTCAGATCCATTTAATCGCGTTAACATGCACAATCTGCTAGTCTGCTGGTCTGCAGTGTTTTCTTGCAAATACAAATCTATTGCAAATCATTCTTATGGAGATACTTATGgaaagagataccaaatgtgAATGCTATTAGACTGCATGAGAACTTTAGATTTAGTACTCGTTTCCTTTCCCTTGGTTGGTTCACGTTCAAACGGATAAAtcccataaaaataaataataataataaattctgtcatttactctgCATTGTGTTGTTCCAAATTCATACGGCTTCTTTAATTTAACAGACTGTTTTTGAGAACGTGAATGTTTATGAGAAAATTTCTGTGAATTGGTCATTTTAATCAGACTGAATTCAGTAAAATAAGTAGTTGACCGTTTAATAAATATCCTTACAGAAATTG

Function

symbol description
kcnn3 Predicted to enable calmodulin binding activity and small conductance calcium-activated potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to act upstream of or within potassium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection; neuronal cell body; and plasma membrane. Is expressed in atrium and cardiac ventricle. Human ortholog(s) of this gene implicated in paranoid schizophrenia and schizophrenia. Orthologous to human KCNN3 (potassium calcium-activated channel subfamily N member 3).

NR:

description
PREDICTED: small conductance calcium-activated potassium channel protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225000.1 True 4195 mRNA 0.45 8 14772091 14808777

Neighbor

gene id symbol gene type direction distance location
LOC122329128 LOC107737536,LOC107673093,LOC107716130,LOC107591120,LOC107687434 coding downstream 47866 14717745 ~ 14724225 (-)
gdi1 gdi1,LOC107564645,LOC107737502,LOC107673075,LOC107716167,LOC107574690 coding downstream 92860 14672277 ~ 14679231 (-)
ada ada,LOC107574722,LOC107737507,LOC107673052,LOC107716171,LOC107564650,LOC107695842 coding downstream 135766 14624253 ~ 14636325 (-)
LOC122328465 LOC107737694,LOC107673066,LOC107568406,LOC107668342,LOC107564659,LOC107716177 coding downstream 202433 14564464 ~ 14569658 (-)
senp1 LOC107673065,LOC107568405,LOC107737512,LOC107716163 coding downstream 208291 14554814 ~ 14563800 (-)
LOC122328901 LOC107549209,LOC107689901,LOC107738870,LOC107681562 coding upstream 97059 14905836 ~ 14933006 (-)
LOC122328916 iqch coding upstream 240589 15049366 ~ 15073882 (-)
LOC122328908 smad3b,LOC107686302,LOC107738715,LOC107583760,LOC107672260 coding upstream 269809 15078586 ~ 15092247 (-)
LOC122328567 LOC107668556,LOC107570149 coding upstream 386340 15195117 ~ 15197461 (-)
LOC122328911 LOC107570149,LOC107668556 coding upstream 507950 15316727 ~ 15324022 (-)
G157966 mef2d non-coding downstream 42429 14651424 ~ 14729662 (-)
G157906 NA non-coding downstream 311074 14326384 ~ 14461017 (-)
G157928 NA non-coding downstream 328640 14383738 ~ 14443451 (-)
G157920 NA non-coding downstream 404462 14366559 ~ 14367629 (-)
G157915 LOC107673099,LOC107737518 non-coding downstream 413061 14357040 ~ 14359030 (-)
LOC122328920 NA non-coding upstream 21487 14830264 ~ 14830849 (-)
G157999 itga8,LOC107689880,LOC107717802,LOC107681583 non-coding upstream 27584 14836361 ~ 14845678 (-)
LOC122328921 NA non-coding upstream 379371 15188148 ~ 15189638 (-)
G158014 NA non-coding upstream 393589 15202366 ~ 15203950 (-)
G157984 NA non-coding upstream 401451 15210228 ~ 15338843 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other downstream 182469 14570347 ~ 14589622 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other downstream 441307 14326966 ~ 14330784 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other downstream 539040 14222809 ~ 14233051 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other downstream 1489764 13280256 ~ 13282327 (-)
G157367 NA other downstream 1554683 13141078 ~ 13217408 (-)
LOC122328913 zgc:162898,c4h15orf61,LOC107738714,LOC107686305,LOC107583911,LOC107718314,LOC107596966,LOC107672207 other upstream 238375 15047152 ~ 15048344 (-)
magi3a magi3,magi3a,LOC107695739,LOC107564661 other upstream 538640 15347417 ~ 15474390 (-)
LOC122329227 NA other upstream 813165 15621942 ~ 15717250 (-)
G158231 NA other upstream 1199329 16008106 ~ 16008915 (-)
G158288 LOC107708856,LOC107570569,LOC107716212,LOC107681953,LOC107695729 other upstream 1335056 16143833 ~ 16169834 (-)

Expression


Co-expression Network