kansl2 (kansl2,LOC107687436,LOC107716132,LOC107737532,LOC107591080,LOC107673082,LOC107593923)


Basic Information

Item Value
gene id kansl2
gene name kansl2,LOC107687436,LOC107716132,LOC107737532,LOC107591080,LOC107673082,LOC107593923
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14050691 ~ 14056567 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225025.1
GTCCAATCAGAGTAAACGTAGGAGGGCGCTAAAATGGATGACGTTCCTCCGCAGCTCATTGTTGTCCATGGCGATGATCACTGGAAGGGGCGGCAGGAAGGTCTCGCTTAAACGTTAACAAAGTGTTACTTTTTAGTGATGAACAGGATTCGGATCCACGTGTTGCCGTCCAGCAGAGGTCGAGTGACTCAAGCTGCTCGTGCTCAAGAACCTCAGACCTGCTCCTACACCCAGAGACCCTGTTCACAGCCTCGTCTTGAGGGCCTAGAGTTCTGCATCAAACATGTACTTGAAGATAAAAATGCTCCTTACAGGCAATGCAGCTACATGTCTAACAAGAATGGCAAGCGCTGCCCCAATGCAGCACCAAAACCAGAGAAAAAAGATGGGGTATCGTTCTGTGCTGAACATGCACGTAGGAATGCTTTGGTTCAGCAAGCTCAGATGCGGAAGGCATCTGCCTCAGGACCTTCTCCTGAAGTCTTGCTGTCTCAGCTCAGCGGCTACAGTCGGCCGGAAACTGGAGCTCACAGTCAAGAGGGCCGTAGTGAAGCTAGTCGTATACTAGACGAGGAGAGTTGGAGTGAAGAGGAGCAGGATCCTGTTGTTTTGGATCAGACATGGAGAGGAGACCCCGACAGTGAAGATGAAAGTCTTGACAGTGACCACGACGATCCTTTAAAGCATGCGGGTGTGTACACAGCAGAGGAAGTGGCACTCATCACACGTGAAAAGCTCATCAGACTTCAGTCCCTCTACATTGACCAATTTAAACGCCTGCAACATTtactaaaagaaaagaaacgaCGCTACCTACACAGCCGCAAAATTGAACACGAGACAATTGGCAGCAACCTGTTAACGGGTCCAGAGGGGCTGTCCACTAAGGAACGAGAGAACCTGAAAAAACTGAAGGCTCTACGACGTTATCGCCGTCGCTATGGTGTGGAGGCTTTGCTGCATCGCCAGCTCAGGCAGAGAAGACAGGCGATTACTGAGGGAGGAACGCCACAGGCGATGCGTTTAGGCCAGAGATGTATTTCTTTTGTGGAAGGGACTCGCTGTTCAAATCCATGTCTGCCAATGACACGACACTGTGTCTCTCACATTTATCAAGACAGTAGCCAAGTGTTATTCAAAATGTGCCCTGGTCTGAAGGACGTTCCATGTGATCGGCCTGTGCACATGGGACAGTCAGAAGAGCCCCGCTGTCCTCTGCACCTGTCCCTGCCTCCACCCATGTACCAGCCTGAGCAGGAGTCTATTGCCCCTGAGCAGCTGGCGTCTGCACCCACAGACATGTACCTCAGCGCCGCAGAGCTCCAGCCAACGGAAAATCTACCTCTGGAATTCAGTGATGATCTTGACGTTGAAGATGAGGGTTTGCAGTGTCCCCCGTCCCCCTTGCTGTTTGACACAGCGCTTGCGTTAGAAGACCAGACAATCAGAGAGATCGCCGAGGCCCCCATGGACATTCTGACAGGGGCAGAGCAGGGCGATCTGGACGGCTCTGCCCAAGATGCTGAGCTCTCCGAGAGAGACGAGGTGTCTGTGGAAGATCAGGTTGAATCTGAAATACTTGAAGCAGTTGGACAAGCAGTTCCCATGCAGAATTCATCAAAAGACTCTGACACGAAAACAACAGATGCCTTATCCTGAGCACCTCGTGACCTGATTTTCTCAGCTGTCGTTCTGTTGATATTTCAAACAGTCCAGATATCTATTTAAAAGCCATATTTCTGGAAGTTTGCTTTGATTGCCGAAACATTTTTAACCTAACATTCTCATTACTTAAAATagcacagtaacacattaaatgTTCTTATATCAACTGCAAGTGTCTTGTGAAATTAAAAGGACAGTTAAATGCGCA

Function

symbol description
kansl2 Predicted to be located in nucleus. Predicted to be part of histone acetyltransferase complex. Is expressed in notochord. Orthologous to human KANSL2 (KAT8 regulatory NSL complex subunit 2).

NR:

description
PREDICTED: KAT8 regulatory NSL complex subunit 2 isoform X2

GO:

id name namespace
GO:0000123 histone acetyltransferase complex cellular_component

KEGG:

id description
K18401 KANSL2; KAT8 regulatory NSL complex subunit 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225025.1 True 1873 mRNA 0.49 10 14050691 14056567

Neighbor

gene id symbol gene type direction distance location
mlh3 LOC107673081,LOC107591079,LOC107737666,LOC107687437 coding upstream 163 14044783 ~ 14050528 (+)
szrd1 szrd1,LOC107673108,LOC107716129,LOC107687433,LOC107737539,LOC107591082 coding upstream 37812 14008220 ~ 14012879 (+)
clcnk clcnk,LOC107737667,LOC107716123,LOC107687482,LOC107593941 coding upstream 138941 13905088 ~ 13911750 (+)
LOC122328345 LOC107591092,LOC107673087,LOC107737549,LOC107716117,LOC101883939,LOC107593944 coding upstream 219246 13824959 ~ 13831445 (+)
ttll10 LOC107591093,LOC107716116,LOC107593935,LOC107687423 coding upstream 226154 13804114 ~ 13824537 (+)
LOC122329330 NA coding downstream 118 14056685 ~ 14056821 (+)
nckap5l LOC107737531,LOC107673071,LOC107716135,LOC107591078,LOC107687440,LOC107593921 coding downstream 1403 14057970 ~ 14085170 (+)
olfml3a olfml3a,LOC107673069,LOC107737697,LOC107593917,LOC107687444,LOC107716140,LOC107591119 coding downstream 85317 14141884 ~ 14149209 (+)
klhl21 klhl21,LOC107687446,LOC107593916,LOC107716146,LOC107591074,LOC107673096,LOC107737529 coding downstream 160940 14217507 ~ 14225401 (+)
nol9 nol9,LOC107591073,LOC107737527,LOC107687449,LOC107716145,LOC107593915,LOC107673104 coding downstream 176534 14233101 ~ 14239250 (+)
G157481 NA non-coding upstream 10492 13981975 ~ 14040199 (+)
G157479 NA non-coding upstream 95145 13955112 ~ 13955546 (+)
G157476 LOC107591085,LOC107673100,LOC107737541,LOC107687430,LOC107593930,LOC107716125 non-coding upstream 97219 13944085 ~ 13953472 (+)
G157475 LOC107737541,LOC107591085,LOC107673100,LOC107593930,LOC107716125,LOC107687430 non-coding upstream 106772 13943589 ~ 13943919 (+)
G157474 NA non-coding upstream 108259 13942021 ~ 13942432 (+)
G157496 NA non-coding downstream 29027 14085594 ~ 14087258 (+)
G157494 NA non-coding downstream 31014 14087581 ~ 14088519 (+)
G157521 NA non-coding downstream 90843 14147410 ~ 14147616 (+)
G157531 NA non-coding downstream 139864 14196431 ~ 14196696 (+)
LOC122328961 NA non-coding downstream 208097 14264664 ~ 14273735 (+)
LOC122328708 LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419 other upstream 1798709 12246193 ~ 12251982 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other upstream 2304121 11697414 ~ 11746570 (+)
LOC122328549 smim4,LOC107560937,LOC107671967,LOC107737614,LOC107712735,LOC107699582,LOC107570283 other upstream 2318330 11730980 ~ 11732361 (+)
G156586 NA other upstream 2873658 11174421 ~ 11177033 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other upstream 2965087 11077154 ~ 11085604 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other downstream 37511 14094078 ~ 14126201 (+)
si:dkey-151g10.3 LOC107737519,LOC107716153,LOC107593909,LOC107668334,LOC107673054 other downstream 243134 14299701 ~ 14343274 (+)
pkig pkig,LOC107737509,LOC107673080,LOC107574720,LOC107564651 other downstream 547226 14603793 ~ 14636817 (+)
itih6 LOC107737505,LOC107673092,LOC107574689,LOC107695841,LOC107716181,LOC107564649 other downstream 552962 14609529 ~ 15153978 (+)
LOC122328906 LOC107673074,LOC107737500,LOC107695835,LOC107716175,LOC107574686,LOC107564653,LOC107576192 other downstream 624293 14680860 ~ 14686618 (+)

Expression


Co-expression Network