nup210 (nup210,LOC107684885,LOC107555788,LOC107675171,LOC107736952,LOC107564796,LOC107713743)


Basic Information

Item Value
gene id nup210
gene name nup210,LOC107684885,LOC107555788,LOC107675171,LOC107736952,LOC107564796,LOC107713743
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 965674 ~ 991444 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225054.1
CCAGCATGCACTACGGCGCTTCAATAGTAACCCACGGCGGGTATTTCCATGCGACAATGTGTGTtcaaaaaatatagtttttccgCGCCCTCCGCTTAAAGTTCTTTCCCGTTACTCggactttcattttaaatacccACGGTTTTTGTACTTGTTAAAATATCCGAAGCGCTAAATTGGCGAAGAAGCAATAATGAAAGTACCGTTCCCGGTCTGTGAAGTCTAGCGCGTGCTGCTGCTGTAGTCTGATACATTGCTCCTATCTGACACCTCTGCTTAGTTCTTCTCGGGCTGTGGCGGGAGTTTGACTTTCTACATGAGGCTACTGGAGAAACTCGCTAATTGTCTCATAACCTTAACGTACCTTCGTGAATAGCGAACCTGTGAAGATGGTAAACGCTCGTGCGCTCTTTATTCTGACCTTCATCTGCGGTTTGACAGACGCCGCCAAACTCAATATACCCAAAGTTTTACTACCTCTTGCCAGAAGCACGAAGATTAATTTTACACTGGAAGCAACCGAAGGATGTTATCGATGGTCGTCTAACAGGCCGGAGGTGGCCAGTATCGAGGCGCTGGATGTGGACGAGCGGCAGTGCTCTCATAAGGCGGTTCTTCAGGCTCGCTCCACGCAGCCGTCCAGACTCACCAGCATCATACTCGCCGAGGACATCTtgaccGGGCAGGTGCTGCGCTGTGATGCAATAGTGGATGTGATCAGCGAGATCCAGATCGTGTCCACCACGAGAGAGCTTCACCTGGAGGACTCTCCTCTGGAGCTGAAGATCCATGCCCTGGACTCCGAGGGAAACACCTTCAGTACTCTAGCCAGTCTGCTGTTTGAGTGGACGATCGTGAAGGATGCTGAGATGGCCGGCTTCCCCGACTCCTACAACACCCTGCGGGTGCTGAGGTTTGCAGAGTCAGCATACACTCCTCCTGCATATATCTCAGAGATGGAGAGAGTGGGACATCAGGGAGATATTATCCTAGTTTCAGGAATCAAAACCGGTCATGCCAAGCTCAAAGCCAAAATACAAGAAGCAATCTACAAGGATGTTGGTGCTGCTGAAGTCAGATTGCTGATTCTGGAAAATATCCTTCTCAGTCCTGCGTATgacatttatttgcttgctgGCACCTCCATCAAATACAAGGTCCAGAAGATTCGTCAGGGAAAGATTACAGAGCTGTCCATGCCCTGTGATCAGTATGAGCTTCACCTTCAGAACAGTGTGGTGGCCCCTGAAGGAAAACCAGACGCTCCAGTGGCAGCCCTGGACCGGAGCAGCTCCACGGTGCTTGGGCTTCAGCACGGACACACCAACATCGTGCTGGACCACAAGAGTCTTGGGATGCAGGGCGCCTTGCGACTTCCCAACAGCACCATCTATGTCGTGGAGCCTGGATACTTGGCATTCAAGATTCACCCTGAGGATCGCTGGGTCCTTGAGACAGCGAGGAAATACGAGATCTTCATTGAAGTGTTTGATAAGTCAGGACACAAGATTTACCTCTCTGATAATATCCGTATAGAAGCCACGTTCCCCACAGAGTACTTTGAGGTTCTGGACTCGTCTGTTAATGGATCTTACCACCATGTGAAAGCTTTAAAACGTGGTCAGACCATCATTGATGGCACGTTGAAAGCGGTTGTTGATCAAACAGGAAGTGTCCACGCTCTCTCTGTTCCTGTGCGTAATGAGCAGGATGTGGAGATCTATGACCCCATCGTCCTTACTCCTGCCATCCTCACGTTCCCATGGCAGCCTAAAGAGGGAGCGTACCAGTACACCATCAAGGCGACTGGAGGAAGTGGCAACTTCAGCTGGTCATCCAATAACTTGGCAGTTGCCACCGTTACAGTAAGAGGCATGATGACCACGGTCAGAGACGTTGGAGTCAGTGTGATTTATGCCCATGACATGAGAAACCCGCTGCACTATGGAGACATGAAGgtgTATGTGATCGAGCCGGTGGGGATGGAGTTCAGCCCGTGTGTGGTGGAGGCCCGCGTGGGCTTGAGTCTGGACCTGCCGCTGCGAATATTCGGTCAGCTGGCTGGAGAGAGAGTGACTCTCAGCGACTGCTCTCACTTCGACATGCAGGTGGACATGGAGAACCACGGCGTCTTTCAGCTGATGGAGGGTCGACTTCCCCCAGGTCAGGGCTATTGCAGTGGGGTTCGAGTTAAGGCCTTGACCTCCACTTACACCAACCTGTTGGTTAGCTACACCCACAGTAACGTTCACCTCAGTGCGAAGATCACAGTTGCTGCCTACCCCCCTCTTAGGCCGATTGACCCAGTGTCTGTGGCTGTGGTGACGCTAGGCTCCTCCAAAGACATGACGTTTGAAGGAGGGCCCCGACCCTGGGTGCTGGAACCCTCCAGGTTCTTCAGAAACCTGACGGCTGAGGACCACAGCAGCGTCGCACTGTCTCTGTATGGACCCGCCTCGCGAACATACTCCAGGCATCTGGTCAGAGCCACGTGCCAAGCTCTGGGAGAACAGGTCTTAGCAGTGACTGTTGGAAACCAGCCCACTGTGACGAACCCCTTCCCTGCTGTGGAGCCAGCTGTGGTGAAGTTTGTGTGTGCACCTCCGTCACGTCTCACTCTGACACCCATCTACCTGAACCCTCAGCTGGATGTGTCCTGCCCTCTGCTGCAGCAGAACAAACAAGTGGTGCCAGTTTCCAATTATCACAACCCCGAGCTGGATGTGTCAGCCTTTGACCAGCAGGGCAGGAAGTTTGATAACTTCAGCTCTTTGAGTATGATCTGGGAGTCCTCCAAAGTTTCCCTGGCGAGCATCGAACCAACCATGCCCATGCAGCTACACACACACGAGGATgacaacaaacagaaaaaactcCACGGTCATCAGATGGTTCTTGTCCATCGTGAATCAGGTGTGGCGGCCATCACTGTGACCGCAGTCGGCTATCAAACATCTCACCTAGAGGCAGCAGCCGTTCTGAGTGGAtttGATCCTCTGAGCCCCGTCTTTGCCACTCTTGACCTGCTGTTAGTGGAGGACGTGAGGGTGACCCCTGACACCATCACCATATACAACCATCCTGATGTGATGGCCGATCTGGTCCTGCAGCAGGGTTCGGGTTATTTCTACGTCAATGCGAGTGTCCAAGGAATTGCAGACGTCATGTTCCAGGAGTCCCAGGGAATTGCTCAGGTGGTCCCGGCTCAGGCGGGGGTCCTGCAGGTGATGGTTCATGACCTCTGCTTGACCTTCCCTTCTCCTGCTACGGCAACAGTTCACATCTCTGATATTCTGGAGGTTTATGTGCGAGTGGTCGACAAGGTGGAGATCGGCAAGTCGGTGAAAGCATATGTTCGGGTTTTGGATGGCAACAAGAAGCCTTTCCTGTCCCGATATTTCTCTGTCATGGACCTGAAGCTGAGGGCAGCGTCCTCCATTATATCCCTTCAAGCTCTGCCTGATTCGTCAGAGGAAGATACGGACACATTTCTGGTCAAAGGTCTGGTGATCGGACAAACTAGCGTGTCTGCTGTTGTCATAGACAAGAATGGCAGAAAAATCACCTCTGCACCCCAGCAAATCGAAGTATTTCCTCCCTTCAGGCTATTGCCTAGGAAAGTCACTCTAATAGTCGGAGCAATGATGCAGGTAACTAATCCTTCTTTTCCTACACACCTGAgAGGGAGGCCCCAACCCCAGTCCAACATCCTCTTCTCTCTGTCCCACGAGAACATCGCCTCTGTCAGCTCTCTGGGGCACGTCAAGGGTCTGTCTGTGGGCAACATGAGCGTGACCGGCGTGGTCCAGGCGGTCGACACAGAAACCGGCAAACTGGTGGTGGTGTCGAAGGATCAAGTGGATGTGGAAGTGGTCCAGCTGAAGGCCATCAGGATCCGGGCTCCCATCACCAGAATGAAGACGGGGACGCTGATGCCGGTGTATGTGATGGGCCTGACCAGCAGCCAGACACCCTTCTCCTTCGGGAACGCTCTTCCTGGACTGACCTTCCACTGGTCTGTGACCAAGAGAGACATTCTGGACATTCACACCCGCCACGCAGAGGCGTCTGTCCAGCTCAGCGCCGAACACAACTTTGCCATGAGTGTGTTTGGCCGGAGTAAAGGCCGCACAGGACTGAGAGTGGTGGTGAAGAGCGGTGATCTTCTGGCTGGACATCTGCAGGATGGTGCCCTCGAGCTCCATGATGAGATACAGATACAGGTTTATGAGAAACTGCAGCTGTTGAACCCAGAAGTTCAAGCTGAGGAGATACTGATGTCCCCAAACTCCCTGCTCAAACTCCAGACCAACAGAGATGGCCTGGGCTCCCTGTCCTATCGTGTACTGGACTGTCCCGACAGAGCGGCTCTCGTTCAGGTGGATGATAAAGGTCACCTGACGTCTGGGTCTCTGACAGGAACAGCTTCGCTACAGATCAGCTCACAGGAAACCTTCGGTGTCAATCAAACCATCATTGTCGCCGTGAAGGTGGTGACCGTCTCGTACCTGCGTCTGAGCACTAGTCCAGTAGTGCACACGTCAAACAGAGAAAGCGTGTCTGCCATCCCGCTGGGAGCTGTGCTCACCTTCACCGTTCACTTTCACGACAGCACCGGAGAAACCTTACACAGCCACAACTCTCTGCTCAGCTTCTCGACCAACAGGGATGATCTGGTGCAGGTCGGTAAGGGTTCGAGTAACGGCTCGCTGACGGTGCGGACGGTGAACGTGGGTCTGACTCTGCTGGGGGTCTGGGACTCAGAGCAGACCGGACTCGCAGATTTCCTCGCTCTGCCGGTCCAGCATGCCATTTATCCAGCTGAAGCACAGCGGCTGGTCGTGGGAGATGTTGTCTGCTTTTCTGCACAGTTTGTTAATCAGGAGGGTGTGTCAGGTGTGTGGAGCTCTTCTTCCAGTGCTCTGCTGGAGATCGATCCCAGGACTGGAGCTGCAGTAGCCAGAGACAAGGGCTCAGTCACCGTGTACTATGAGATACCCGGTCAACTACGCACCTACAGAGAGGTTCTCATTGAAGGTGCATCTCAGACATCTGTCATGATTCCTGCAGTGAAGAAGGACAGAGACTCCAAAGTCTTGATGTCGACCAGGGCCACGGGAAGCAACCTCATAGGCAGCTGCTCGTCATCTCAGTCCGACAGCATGGCTCTGCTCCACCCAGAGTCCTCCATCAGCTGCCAGCTCCACTTCACCAGCAGCGGCGTGGACTTCTCTGCTCATGATGTTTACCACACTCACACAGCCTTCGACGCCAGCACAGGTTTCTACAGCTGCTCGCTGAGCTTCAAGCCCATGAGTGACCAGCAAGTGAAGGTGTTGAGCCTGTCTATGACGGAGGTGGAGGTGAAGGCCGGCGTTCAGGGATCTGTCTTCAGCGGAGAGCAGATCAGCGCCCGGCTCCCCGTCAGTCCAGGGATCTACGCCGATCAGACAGACATCATCTTGAGCAATCAGCAGCCGTCGGCAGAGCTGACCATCTACGGGCCGACAGCCGTGCTCCAGCAGCTAGACGTGAAGAGCAGTTCTCCAGTGATTGTGATTGAGGAGAAGGAGGTCTCTCTCAGCTACGTCAGGTATGCAGTCAGTGTGCTGAGGCCGCTGGGGTCTCTGACGGCGTCGGTGTCCGTGAGCAGCGCCTCCAGTGCTCAGGTTCTGCACGTCCCGGTGACTGTCATGCATCTCGCAGCCAGCAGCTCTTCTGTGCAAGCACATGTAGTAGACGGAGCAGACGGGCCCAGTATTCTTCAGCAGTTCATTGACTCCTATCAAGTGATGTTCTTCACTTTGTTCTCTCTTTTGGCTGCCACCGCTGTTATCATAATTGTGTGCCATGCGCTGTTTTCCCCGAAAGATCCTGTCAGTCATCCTGCGTTCATCCAGAAGACTCCGCCTCCTGCAGGTGTAGCCAAGCTGACTGAAAGCCCCTTCAGCAACAGCATGTCTTCAGACTTGAAGGCAAGCCCAAGATTACGCTTGTACTCACCAGACTACAACTCCAGATAAACCCTGTCCAGCAGAAGACTGGAGAAAGTGCCTTAGCGCTGAATGCAGGAGAACGAGCATGCCGGAAAACACTTGTATTGCTTACCTGCTTAAAACGATGgctttttcatttgaatgctTGTGTGCTGAAATGCCGCATGTCTAATAGAATATGGCAGggctgtttgttgttttgtctttttttgtttgattatttaaacGTTTGACGTGTGGACTGatttattctaattattttcagtattttcccCCATCCCAATAGTTTTCGCAGCTCGAGGCTTTTTAATTTGTACTGAATTGCGACGGtaaacataatgttttttttctttttctgacgCTCAGGacaattttgaaatgtaatgcgAGACTGCGGCTCGACGATGTAgcatcatgtttgtttgtgattAGTGCAACCACTGATTCCGTCCAAAGTGCtcttacatgtgtgtgtgttgtgcagaaACTATCGGCCAGtcgtttgctttattttgtgaaCAATGTCAATTGATTTTAATGATATGTTGAACTCTTGAGTTGAGTGCAGCTTCTTTCAGTTACTAATGTGAATGATAAATCTGTTTAAGGGCTTAATTCagttaaattgatttaaaggGCTTCTTAAAGGACTGACTGGTACCCTGTGAAGCAGCTTCAGTCCCAGCGTAGATACGTTACACTGACGCATCTGTAACTGTGAGTGTTGATTTAAGAATATGTGAccatttttttcacagaaaaaaaaaaaaacctcagctTTGAGCCTCTTTAAGTGGAAACCGAGTGAAGACTTTTTCGGTAGCTATAAGCAAGAGCCATAATGTGACTCAGAACTGCTGCACTGAATAAAACCAGGAATTGTGAATCTGTCATAACTTTGACTTTAATCTGTACATGTAACCACTTCTGagcctttctctctctatatatataatgtgctCTTCTGTTCATTATATCCCcctcaaaaaaataatagcttGCGCATTGTGAAGCATTTATTTacgttgtttttctttttttgcagcttgagatctattaatattaaatatgctcttttta

Function

symbol description
nup210 Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of nuclear pore. Orthologous to human NUP210 (nucleoporin 210).

NR:

description
nuclear pore membrane glycoprotein 210

GO: NA

KEGG:

id description
K14314 NUP210, GP210; nuclear pore complex protein Nup210

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225054.1 True 7076 mRNA 0.51 40 965674 991444

Neighbor

gene id symbol gene type direction distance location
LOC122329272 LOC107736949,LOC107675168,LOC107564797,LOC107555789,LOC107684883,LOC108181449,LOC107713762,LOC107684884,LOC107555806 coding downstream 6683 905611 ~ 958991 (-)
gp9 LOC107736950,LOC107675164,LOC107564798 coding downstream 60213 903508 ~ 905461 (-)
raf1a raf1a,LOC107713759,LOC107684881,LOC108427788 coding downstream 70351 883192 ~ 895323 (-)
tnnc1a tnnc1a,LOC108427795,LOC107684904,LOC107736944,LOC100708228,LOC107566179,LOC107568483,LOC103385538 coding downstream 131093 808924 ~ 834581 (-)
LOC122329137 NA coding downstream 655097 308363 ~ 310577 (-)
LOC122328452 wnt7a,LOC107684886,LOC107736972,LOC107713763,LOC107555800,LOC568110,LOC108276349,LOC107564804 coding upstream 18459 1009903 ~ 1018911 (-)
trnam-cau_118 NA coding upstream 28328 1019772 ~ 1019843 (-)
ptpdc1b LOC107736953,LOC107564794,LOC107684888,LOC107555790,LOC107713765 coding upstream 33213 1024657 ~ 1032351 (-)
adtrp1 zgc:112175,LOC107684890,LOC107713766,LOC107555804 coding upstream 41048 1032492 ~ 1037268 (-)
mybl2a NA coding upstream 47477 1038921 ~ 1044635 (-)
LOC122328476 NA non-coding downstream 2097 960274 ~ 963577 (-)
G153893 cnbp non-coding downstream 65908 841719 ~ 899766 (-)
G153911 NA non-coding downstream 189624 770513 ~ 776050 (-)
G153760 NA non-coding downstream 282563 679034 ~ 683111 (-)
LOC122328559 NA non-coding downstream 381183 583143 ~ 584491 (-)
G153966 NA non-coding upstream 214035 1205479 ~ 1206602 (-)
G153967 NA non-coding upstream 215256 1206700 ~ 1207587 (-)
G153984 LOC107727750,LOC107691341,LOC107566873 non-coding upstream 397918 1389362 ~ 1393135 (-)
LOC122328606 NA non-coding upstream 428413 1419857 ~ 1420454 (-)
LOC122328609 NA non-coding upstream 602168 1593612 ~ 1594209 (-)
vgll4a LOC107675174,LOC107736947,LOC107713758,LOC107684880,LOC107555803,LOC107574679 other downstream 83490 865477 ~ 882184 (-)
ndnl2 ndnl2,LOC107736943,LOC107568481,LOC107714263,LOC107660884 other downstream 179795 779085 ~ 785879 (-)
l3mbtl1 l3mbtl1,LOC107736954,LOC107564793,LOC107684891,LOC107675169 other upstream 61933 1053377 ~ 1064774 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other upstream 516254 1507698 ~ 1512329 (-)
LOC122328833 LOC107669693 other upstream 1111266 2102710 ~ 2116883 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other upstream 1778038 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other upstream 1795852 2787296 ~ 2798533 (-)

Expression


Co-expression Network