hspb7 (hspb7,LOC107591086,LOC107578967,LOC107716085)


Basic Information

Item Value
gene id hspb7
gene name hspb7,LOC107591086,LOC107578967,LOC107716085
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 13897806 ~ 13901112 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225057.1
CAACTCGCAGGCTAGACCCACCATATAAAAGACAGTCAGACAGACAAAAGCCATACCAGAGAGACACAGCTGATATAAAGAGTGAGAAAGGTTCTGAGGCTTGAGAGAGGATTCACGCAGTGTTTTGAATAAGGACAGCGCAAAACTACTTCATTTACACACTTAGTGCTCACTGTATCTCTTCAAAGCTCTGACTGGATATCGATTTGAAACCGTCTAAACACTAATGAGTGCGACCAACTCCTCTGCCTATCGATCGGAGCGCAGTTTCCACCAGACgtcctcctcatcttcatcttcaacCTCAACAAACCCATACATGGAGAAGAGCCGGGGACTCTTTGCAGAGGACTTTGGATCTTTCATGTGTCCAAAAGATGCTTTGGGATTTCCAAaCAGAACAGGGACAGTTGGAAACATCAAGACTCTGGGAGACACATACCAGTTCACAGTGGATGTCCGAGACTTCTCTCCTGAGGATGTGATAGTCACCACCTCAAACAATCAGATTGAAGTACATGCTGAAAAGCTTGCTACTGACGGAACAGTGATGAACACGTTTACTCATAAATGCCAGCTACCAGACGATGTAGACCCCACCTCGGTGAAGTCGAGTTTAGGGGCTGATGGGACACTCACTATTAAAGCACAGAGAAACACCGCAAAACTGGAGCACGCACAGACTTTCCGCACAGAGATTAAAATTTAGATCTTTCCTCTCCCGCTCTATCTGTTTTCCTGTGATAAATGACCTTGATAATAGTTACTTAGTCCTGCTTTGTCATTCCTCCATGACCTTCTCTCATTACTTCTCGTTAGACTTGGGTGGAATTTAATCCTGTCACAtgtattcaaaacatttaagacAAATGCACTGCTAACGTCAATTCCCTGCTAAATACGTATCACCttacagtggggtccaaaatTGTGGAGACCCCAAAGAACATCTGTGATTCTAAATCCAATTTTAATCTGTAAAGAAACAGAGCATTTTAGGATTTTGagagtataaaataaaatgcatgtctttaaataaataagaagtgTCTCAAGTGTGCACTATTCTGTCACGCAATGTAATCTAATTTGTTAGGTTGATCACATGGTTGATCTCTTTCTGCAGATGCTCAGATGTTCTTGCTTCCATTAAAGCTCAAGATTATCTTTGAGTCATTTAAATCATGGTGGTAAACATGATCATCAGGCTTTATACAGATGTGTGAGGTTCATGTAGTTTGAGTGTTGTTGTCATGAAATCAACAAGAGGACAAACCAAATACCAAAATGTTAACTTTTCcctaataatataatttgaaatgcgtaaaaaaacattttagtagtAATTGTCCAAGACTTTTGGAGCTTGTTGTATGACAAACGACTAAAAGAGAAACCCATTAATTGAACTGATTCTTATTCTTATCAAAAGGTATATTTTCTAACTGTAAACCTGTGTCGTGTTGGGTGATCTAAAAATGATTCTAGAAGATAATAAAACCAGAACACCACTGATTAGTATTTTAA

Function

symbol description
hspb7 Acts upstream of or within several processes, including Kupffer's vesicle development; cardioblast migration to the midline involved in heart rudiment formation; and determination of left/right symmetry. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including Kupffer's vesicle; adaxial cell; cardiovascular system; musculature system; and pericardial region. Used to study heart disease. Orthologous to human HSPB7 (heat shock protein family B (small) member 7).

NR:

description
Heat shock protein beta-7

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG:

id description
K09546 HSPB7; heat shock protein beta-7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225057.1 True 1527 mRNA 0.39 3 13897806 13901112

Neighbor

gene id symbol gene type direction distance location
zbtb17 LOC107673084,LOC107737543,LOC107591087,LOC107687428,LOC107716122 coding downstream 708 13887196 ~ 13897098 (-)
ddost ddost,LOC107673085,LOC107687429 coding downstream 11726 13882388 ~ 13886080 (-)
plekhm2 plekhm2,LOC107737546,LOC107687427,LOC107716120,LOC107673107 coding downstream 16088 13869388 ~ 13881718 (-)
ano11 ano11,ano7l1,LOC107737547,LOC107591089,LOC107716119,LOC107593934,LOC107687426,LOC107673051 coding downstream 29237 13852466 ~ 13868569 (-)
arhgef19 arhgef19,LOC107673086,LOC107737548,LOC107591090,LOC107687425,LOC107716118 coding downstream 46767 13835056 ~ 13851039 (-)
fam131c fam131c,LOC107737545,LOC107673113,LOC107577560,LOC107687483,LOC107716124,LOC107593947,LOC107591121 coding upstream 11443 13912555 ~ 13923481 (-)
epha2b epha2b,epha2,LOC107591085,LOC107737541,LOC107673100,LOC107687430,LOC107716125,LOC107593930 coding upstream 31876 13932988 ~ 13955555 (-)
spen spen,LOC107737540,LOC107591084,LOC107687431,LOC107716126,LOC107593929 coding upstream 67406 13968518 ~ 13999572 (-)
tmem82 tmem82,LOC107737537,LOC107593928,LOC107673057,LOC107716128,LOC107580573,LOC107687464 coding upstream 98773 13999885 ~ 14002685 (-)
sult1st5 LOC107591081,LOC107673112,LOC107737538 coding upstream 101324 14002436 ~ 14007735 (-)
G157826 NA non-coding downstream 72217 13823993 ~ 13825589 (-)
G157813 NA non-coding downstream 124498 13772775 ~ 13773308 (-)
G157799 NA non-coding downstream 150635 13742257 ~ 13747171 (-)
G157765 NA non-coding downstream 461945 13433755 ~ 13435861 (-)
G157365 NA non-coding downstream 775780 13121813 ~ 13122026 (-)
G157863 NA non-coding upstream 156725 14057837 ~ 14075937 (-)
G157874 NA non-coding upstream 240827 14141939 ~ 14142168 (-)
G157875 LOC107673069,LOC107737697,LOC107593917,LOC107591119,LOC107716140,LOC107687444 non-coding upstream 242550 14143662 ~ 14143930 (-)
G157880 NA non-coding upstream 335240 14236352 ~ 14237014 (-)
G157885 NA non-coding upstream 341469 14242581 ~ 14243955 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other downstream 615479 13280256 ~ 13282327 (-)
G157367 NA other downstream 680398 13141078 ~ 13217408 (-)
G156985 NA other downstream 1973156 11922844 ~ 11924650 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other downstream 2039838 11763709 ~ 11857968 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other upstream 321697 14222809 ~ 14233051 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other upstream 425854 14326966 ~ 14330784 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 669235 14570347 ~ 14589622 (-)
LOC122328902 LOC107737500,LOC107673074,LOC107695835,LOC107564653,LOC108275744 other upstream 783778 14684890 ~ 15301682 (-)
LOC122328913 zgc:162898,c4h15orf61,LOC107738714,LOC107686305,LOC107583911,LOC107718314,LOC107596966,LOC107672207 other upstream 1146040 15047152 ~ 15048344 (-)

Expression


Co-expression Network