epha2b (epha2b,epha2,LOC107591085,LOC107737541,LOC107673100,LOC107687430,LOC107716125,LOC107593930)


Basic Information

Item Value
gene id epha2b
gene name epha2b,epha2,LOC107591085,LOC107737541,LOC107673100,LOC107687430,LOC107716125,LOC107593930
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 13932988 ~ 13955555 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225093.1
CCGGCGGGCGGGGTTCATCAAGCTCCGTGTTTCTCAATGAGTCTGTCGAGAGCGCGACTGGACTGAGCGTGGAGCACACAACATCACTGTCCACTCCGAACACGACATGGATTACAGACGGATTAAGCGTATTTTATTTGTCAATGTATTTAtgaactttgtatttatttctcttcAGAAAAAGGAAGAGGTGCTGCTGGATATGGTGGCTTCAGGAGCGGAGCTGGGTTGGTTGACGTCGCCTGTTGATCACGGGTGGGAGATAGGCCAGCGGGCTGTGAACGGCTCTCTGTTGTATAActattatatatgtaatgtggAGGAACGAGAACAAGACAACTGGCTTCGTACTACATTCATCCAGCGCCACCCCACCGCCTCTCGGGTCTTTGTGGAGCTGCGATTTGTGGTCCGTGATTGCAACTCTTTTAATGCAGACTCGCTAATCTGCAAGGAGACCTTTAACTTGTACGCCTCTGAGGCAGACGCCGACATTGGCACTGCTTTCCGCAAAGGTCTGTTCCGCAAAGTGGCCACCATTGCTCCAGATGAAATTTCTAGCCTTGGAGAGATGAAGATGAACGTTGAGACAAAAATGGTGGATAATCTTTCTCGCAAGGGCTTCTACTTGGCCTTCCAGGACATTGGGGCCTGCGTCGCCATCTACTCTGTCAGGGTTTACTATAAAACATGTCCAGCAACAGTGAAGAGCTTGGCAGCATTCCCTGAGACCGTGGCAGGGGGAGAGAATCAAGCCCTGCGGGAAGTGGCTGGAAGTTGCGTCTCAAACGCTGTAAGCGAGGACCAACCTCGCATCTATTGCACCACGGATGGGGAATGGGTGGTACCTGTGAGCCAATGCCAGTGCAGACCTGGGTTCGAGGCCATGAACAATGCATGCCAAGaatgTCAGTCTGGTTTCTTCAAATCTTCAGTGTCCAGCGAGGCCTGCAAACCCTGTCCAAAAAACACCCAGCCCTCAGGTCCTGGCGCCACCAGCTGCACCTGCAAGGACGGCTTTTATCAAGCACCCGAGGACCCCAAAACAGCTCCTTGCTCTGGTTTACCCTCCGCTCCTCAGAGTCTGGTGGCAACCACGGCTCAGATGTCAATAGGCAGGCTTCAATTGTCGTGGAGGCCCCCTGCAGACACCGGCGGGCGCAGTGATATCATGTACACTGTGGTTTGCGAACGCTGTGAGGGGAGGGCATGTCAGCCCTGTGGTGAGAAAGTGCGTTTCGATCCAAGCAACACTGGCCTGAAGGACACCAGAGTCACCGTGAGTGAACTGGAGCCCCATTTGAACTACACTTTCACTGTGGAGGCACGGAGTGGAGTGTCCCAGTTTGGCAATAAGAGAGCCACCAGCAGCATCAACACCGCTTTACATTATACAGATCCCCCAAAAGTGACTGCAATGCATCTTGTGGACAGCAGCTCCACCAGCCTGTCACTTCAGTGGTCTGTTTCTCACCGTTCCAAGCCAGTTGCCACGCGTTATGAACTGATGTATCGCAAAAAGGAAAATGATGAGGAGATAGCCAACGGAAAGGTCACTACCTACACTGTGCTGGTGCTGGAAAAGAACTCGGTTCAGATCAGTGATCTGTCTCCTTCCACCGTCTACTTGTTTAAAGTTCAAGCTCTCAGCCCAGAAGGAAACCCAGGCAGCCACAGCTTGGAACAGGAGTTTTCAACGCTCCCGCAAgCTCTTCAAAAGCAGGGAAACACACCAGTGATCCTCGGGGCCGCGATCGGAGGAGGCATCATGCTTTTCATCGTGGTAGTGGTCCTGCTTCTGCGAAAACGGCGAAGAAACTCTCACACCAGACAAGGGCCAGAGGACACCTATTTCTCCAGCCCAGACCAGCTGAAGCCGTTGAAGACCTACGTCGATCCTCACACGTACGAAGACCCTAACACGGCAGTGCTCAAGTTTGCCAGCGAGATCCATCCCAGTCACATCACAAAGCAGAAAGTCATCGGAGCAGGTGAGTTTGGAGAGGTGTATCGAGGAATTCTGAAAGCTCCCGGTCGGAAGGAAACAGCTGTTGCTATAAAGACGCTGAAGCCAGGatacacagagaaacagaggcAGGACTTCCTCAGCGAGGCCAGCATCATGGGACAGTTCTCACATCAGAACATCATCCGACTGGAGGGGGTGGTCACCAAATTCAAGCATGCCATGATTGTGACCGAGTACATGGAAAATGGAGCTCTTGACAAATACCTGAAGGACCACGATGGCGAGATGTCATCCTTCCAGTTGGTCGGTATGCTCCGTGGCATTGCGGCCGGGATGAAATATCTCTCAGACATGAGCTATGTACACAGGGATCTGGCTGCCAGAAACATCTTGGTCAACAGCAACCTGGAGTGCAAGGTGTCTGACTTCGGTTTGTCACGTGTTTTGGAGGACGACCCTGAAGGAACCTACACCACCAGCgGAGGTAAAATTCCTATTCGCTGGACTGCTCCGGAGGCCATAGCTTACAGGAAATTCACGTCAGCAAGTGATGTGTGGAGTTTTGGCATTGTCATGTGGGAGGTCATGGCCTTTGGAGAGAGGCCCTACTGGGACATGAGTAACCATGAGGTAATGAAGGCCATTAATGAGGCTTTCCGCCTTCCTGCTCCAATGGACTGCCCCTCTGCCGTCTATCAGCTGATGTTACAGTGCTGGCTGCAAGATCGCTCCAAACGGCCCCGCTTTGGCGACATTGTCAGCATACTAGACAAGCTCCTCAAGAGCCCTGATTCTCTGAAGGCCATTGCAGATTTTGACCCTCGAGTTTCCATAAGGCTTCCCAGCACCAGTGGCTCAGATGGCTCTCCCTTCAGGTCTGTGGCCGAGTGGCTGGAGTCCATCAAGATGAGCCAGTACAGCGAAAACTTCAATATAGCCGGAGTCGTCAGCATGGAGCAGGTGCTGCAGATGAAAAGCGAGGATATTCGTAACATTGGCGTCCGTCTGCCGGGCCATCTGAAGAGGATTGCCTACAGCATCTTGGGGCTTAAGGACCAGACGAGCACCCTGAGTGTGTTTGCAGTGTGAACTGTCTTTAAAAAAGTACCGAAGGGACCGAACCCTTTGGCCGTGGACTGAATAAACTCTCAGCTGCCTCGGGATTGGACTGCAGGGACAGCCCTTGACCTGGCCATAACCCTCCAGTCCAGCGAGATGGACTCTCACCGCTGCGGACACATTGGAGTAGCATTTGGTGTACTTATAAAAAATGGAGGAAGtgtaaaacaatcaaaaagCTATTGATGTATGCATCAAACCATgtatattagatatatttttaccatatgcatatgtttattttttagagaaaatatagtcatttctttatagttttgcttttttacattttttgttagtttcGTATGCATGCTATATATTTTCGCCGGACAGCGATCAATGCTAGTTAGCACTCACTTTACGCTCGGATCTTACGTTGCTCCTCCATTGCTGTTGGCACTGTATTGCTCTGTACTTGACTGAACGTTTCAGCAGTACGAGAGAAAACCAGACCCACAGGTCTTTCTGTACCAGAAACACGGACTCGAAGCTGGCGGTTATGGGCTTCAACCTAAGACTTAACGATGTTCTGCTGAGATCAAGGTGATTGTAATGCTCTCTGGTTTCTATCATGCTTGAGTTGGCCATGATTTGATGTCTCGCACGATGACATTTCTTTACAATTGCACTCTCAGCGCTATATGCTTTGGACCATCAAGTTTAAAGTCTCTGGTTTAGATGAAACGGAGCAGCGAGGCGTTCCTTAAATCCTGTGTTTTCTCTGCAAACAAGAAGAGAGGAGGCACCGCCATGAAATAGCACTTAAATCACAAATCTCAACAGCTGTCTCATCCCTTATCGTTATGAAAGGTTACGGCAGTGATGACATTAAGGATCGAAGGGAACAAAGAGCgagcaaaatgacaaaatggaaATGGgttgagaaggaaaaaaaaaactgttctggaacagatTGTCGGACTAAATCAAATGGGAAAATGCGATCCGGCGGTGTTCTACAAACAAAAGCACGGTTCTGATTTTCAGATATTTGCACCAAGTGACAGTCCTAGCAAACTGAGAAAATGATCAAACAGACCAGGATATGTGGATGATATACCAAGGTCTGTTATTCATTCTGTATCAGCAGATTAAAGTCGCCTGGAGCTGTGAATTGTGGAGACTATCTTTGGCAGATCTGGTTTATGATTAACTGATTTAAGATATGCTGGGATGAAATGCTACAACCTCTCTTGATTATTTCCTCTGACTTATAAGACCTCAATATGATTTCACATGTGGGGTAGATAAGCCCCTTCGTATGGAAAGTCTTACTCCATATtaaattctctctctttttttttttgtatttacagaGGAGAGAAACAGCTACGTAATGTCCTTAAATCTTAATGGATATTGCAGTTCCAGTTAAtttcacatgatttttttttttttgtagatgttGAATGCAGATGGGTTCTTCCTTTTTTTAGAAATGACatatttagtgtttgtttgcagtTGATAATGTGTTTCATATCTATTTTAAGTGGGACGTTGATACTGGCAAACTGCAGGACTTTGTTGTAAAGGGAAAATTGTCATTTCTGATCACTTATTACCTTTTTCTCGAAACACTCAGttaaaaaacatgcatactTCCAAACAAAGAACAGTTTGATTGGGCcaagtgttttgtattttatttaatagtctatttattttttactttatttattgttttaatgacaCTGAATTGGGATTTATTTGTAATGGAAGTTTGTCTTTCAGTCACAATAAAATCTTTGTAGCCTTTCA

Function

symbol description
epha2b Predicted to enable ATP binding activity and ephrin receptor activity. Predicted to act upstream of or within protein phosphorylation and transmembrane receptor protein tyrosine kinase signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of plasma membrane. Is expressed in shield and somite. Human ortholog(s) of this gene implicated in cataract 6 multiple types. Orthologous to human EPHA2 (EPH receptor A2).
epha2 Enables growth factor binding activity and transmembrane receptor protein tyrosine kinase activity. Involved in several processes, including activation of GTPase activity; intracellular signal transduction; and regulation of intracellular signal transduction. Located in several cellular components, including focal adhesion; lamellipodium; and tight junction. Is integral component of plasma membrane. Implicated in cataract 6 multiple types.

NR:

description
PREDICTED: ephrin type-A receptor 2-like isoform X1

GO: NA

KEGG:

id description
K05103 EPHA2, ECK; Eph receptor A2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225093.1 True 4849 mRNA 0.47 17 13932988 13955555

Neighbor

gene id symbol gene type direction distance location
fam131c fam131c,LOC107737545,LOC107673113,LOC107577560,LOC107687483,LOC107716124,LOC107593947,LOC107591121 coding downstream 9507 13912555 ~ 13923481 (-)
hspb7 hspb7,LOC107591086,LOC107578967,LOC107716085 coding downstream 31876 13897806 ~ 13901112 (-)
zbtb17 LOC107673084,LOC107737543,LOC107591087,LOC107687428,LOC107716122 coding downstream 35890 13887196 ~ 13897098 (-)
ddost ddost,LOC107673085,LOC107687429 coding downstream 46908 13882388 ~ 13886080 (-)
plekhm2 plekhm2,LOC107737546,LOC107687427,LOC107716120,LOC107673107 coding downstream 51270 13869388 ~ 13881718 (-)
spen spen,LOC107737540,LOC107591084,LOC107687431,LOC107716126,LOC107593929 coding upstream 12963 13968518 ~ 13999572 (-)
tmem82 tmem82,LOC107737537,LOC107593928,LOC107673057,LOC107716128,LOC107580573,LOC107687464 coding upstream 44330 13999885 ~ 14002685 (-)
sult1st5 LOC107591081,LOC107673112,LOC107737538 coding upstream 46881 14002436 ~ 14007735 (-)
atp13a2 LOC107737536,LOC107673093,LOC107716130,LOC107687434 coding upstream 57692 14013247 ~ 14025526 (-)
LOC122328469 sdhb,LOC107673094,LOC107593926,LOC107591143,LOC103467007 coding upstream 70079 14025634 ~ 14029168 (-)
G157826 NA non-coding downstream 107399 13823993 ~ 13825589 (-)
G157813 NA non-coding downstream 159680 13772775 ~ 13773308 (-)
G157799 NA non-coding downstream 185817 13742257 ~ 13747171 (-)
G157765 NA non-coding downstream 497127 13433755 ~ 13435861 (-)
G157365 NA non-coding downstream 810962 13121813 ~ 13122026 (-)
G157863 NA non-coding upstream 102282 14057837 ~ 14075937 (-)
G157874 NA non-coding upstream 186384 14141939 ~ 14142168 (-)
G157875 LOC107673069,LOC107737697,LOC107593917,LOC107591119,LOC107716140,LOC107687444 non-coding upstream 188107 14143662 ~ 14143930 (-)
G157880 NA non-coding upstream 280797 14236352 ~ 14237014 (-)
G157885 NA non-coding upstream 287026 14242581 ~ 14243955 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other downstream 650661 13280256 ~ 13282327 (-)
G157367 NA other downstream 715580 13141078 ~ 13217408 (-)
G156985 NA other downstream 2008338 11922844 ~ 11924650 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other downstream 2075020 11763709 ~ 11857968 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other upstream 267254 14222809 ~ 14233051 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other upstream 371411 14326966 ~ 14330784 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 614792 14570347 ~ 14589622 (-)
LOC122328902 LOC107737500,LOC107673074,LOC107695835,LOC107564653,LOC108275744 other upstream 729335 14684890 ~ 15301682 (-)
LOC122328913 zgc:162898,c4h15orf61,LOC107738714,LOC107686305,LOC107583911,LOC107718314,LOC107596966,LOC107672207 other upstream 1091597 15047152 ~ 15048344 (-)

Expression


Co-expression Network