LOC122329006 (LOC107712662,LOC107593423,LOC107699566)


Basic Information

Item Value
gene id LOC122329006
gene name LOC107712662,LOC107593423,LOC107699566
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 12047116 ~ 12048791 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225154.1
ATGCGTTTCCCACGTGCTTTACCGCCCTTCGTGCTGTGGGGCGCAGTCTGCGCGTGTCCGACCCCGAGCCAGGACGCCAACATCACTTCAGACGCCCCCCGGCTGCCGGACCAGGGACGCTGCCTCTTCAGATCCATCCTGCCGTCAAACACAGCTGTGCAGGTGCTGGTGTGCGTCTTCGTGGTGATGACCGTCCTCTCGCTCATCATCAACGGCTGCACTCTGTTCAGCCTCGGCAGCTCAGAAGACTTATCCTGGGAGCCACGCTTTGCGCTGCTGAAGAACCTCATAGTGAGTGACATCCTGCTCATTGTAACCCAAGGTCCAACGGTTGTGTACTGTCTGCTGCAGAAGACCACTCTGCCCTATGGCGCTTGGTGCATCACTCAGTTCTTTATTAacactgtttgtgttttctgcaCTATTCTTACCATCACCTGCATGGCTTTGGAGCGATACCTGTACGTGTGTCAGGCCATCTACTACCTTATTATACTAACCACCAAGCGCCTTTACTTGATAGTCGGGCTCACGTGGCTTATTTCCCTATCCTTATCAGCAGTGATCACTGCTTTGCTCGGTTTAAGCCACAAGAGCTCGCTGCTGGGAAAACCCATAACGGGACTCCTCTGTGAACCGGACACCTTGGAGGCCCACCTTGGCTTTCCACGGGGCTCTGCTGTGTTTCGAAAAGTGGTCGGGCTTGTGGTGACGCTGCTTTGCATCTGCTCCTACTCGTTCTCGTACCTGCGCATGTATCAGGAGGCGCGTAACGCCGTTCAGCCTTTCCAGCAGGTCAACAAGAGGGCACGCAAAACGGTGATGTTCTACTGCTCCATGCTGCTGCTTCAGCTGCTCCCCATCTTCCTGAAGATAGCCTCGGACGCCCTTTGGGAGCTCGAGGGCAACATGGCGATGTTCCGTTCGCTGGATTACACTGGAGACTGGACATCAGCAGGGACCCTGCACatcatgctgctgctgctgcttcaggTTCCTCCTTGCATTAATCCGCTCATTTACGGTCTGCGCAACAGAGAGGTGAGGCAAGCTCTGCCCCGGCTGCTGTGGCTGAGGAAGGACAACCACTAAATTCAAGATGTTTCCAGGCACCTGGCTACctgaagagaaacagagaagaagAGTGAGGTTTTCATGGTTTATTGTGAGATTATAACGCACAATCTAAAACTTTAATGCAAAACTGTAAATCTGACCCAAATGTAGTGTGCCTATTGTTCATAAAACATGTCTGTACTTTGTCATATACTATCATGCTGTAAAACTGTGACTTCAcccatgtttatatattttatatgtatgatTGCTTAATATCAAACacctattttgtttttttggtttatttttgacAAGAAGAGAAGTAAATTAGAGTGAATGTTACAGATGCTCCACTTACGTTCACTTACCACACTGTTAAAAGTACTCGGCATTCAACCTTATGCAAACATTCCTAAAGCTGTGTAATATCATTCTATTAACCTTCTTAAAGATGCACTGTAAGCAGGCATAGCAAAAATGAGTAGGTGAAACAGCTTTCTGTACGCCAGAATAACAGATATCAGGGTTTAACTGCAGGCGAATACTGTAGCTTCATAAATGAATACTTACAAGGGGaaggaaaaacatattttacatacgACAAAAAAGGGAATTGT

Function

NR:

description
PREDICTED: olfactory receptor 2AG1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225154.1 True 1676 mRNA 0.48 1 12047116 12048791

Neighbor

gene id symbol gene type direction distance location
si:rp71-17i16.5 si:rp71-17i16.5,LOC107712701,LOC107699595,LOC107593445 coding downstream 1811 12038033 ~ 12045305 (-)
si:rp71-17i16.6 NA coding downstream 14370 12030850 ~ 12032746 (-)
lamb2l lamb2l,LOC107672045,LOC107568836,LOC107699593,LOC107593402,LOC107712713,LOC107737682 coding downstream 16886 11995970 ~ 12030230 (-)
lamb2 lamb2,LOC107737594,LOC107672036,LOC107699592,LOC107712697 coding downstream 52225 11961859 ~ 11994891 (-)
usp19 LOC107737595,LOC107671985,LOC107568839,LOC107712698,LOC107699591 coding downstream 86011 11941114 ~ 11961105 (-)
taf13 taf13,LOC107671955 coding upstream 16556 12065347 ~ 12066172 (-)
znf362b znf362b,LOC107593390,LOC107737708,LOC107565834,LOC107699608,LOC107712695,LOC107671956,LOC108434701 coding upstream 155542 12204333 ~ 12212104 (-)
megf6a megf6a,LOC107687467,LOC107593418,LOC107712656,LOC107671929 coding upstream 336052 12384843 ~ 12440260 (-)
her12 LOC107703051,LOC107591151,LOC107737706,LOC107593438,LOC107687468,LOC107712674 coding upstream 468131 12516922 ~ 12519193 (-)
LOC122328351 LOC107737705,LOC107712654,LOC107703076,LOC107712673,LOC107593382,LOC107593415,LOC107687469 coding upstream 473030 12521821 ~ 12531561 (-)
G156972 NA non-coding downstream 195406 11793603 ~ 11851710 (-)
G156971 NA non-coding downstream 264750 11781567 ~ 11782366 (-)
G156962 NA non-coding downstream 284093 11762440 ~ 11763023 (-)
G156812 NA non-coding downstream 507071 11539623 ~ 11540045 (-)
LOC122328925 NA non-coding downstream 670428 11376177 ~ 11376688 (-)
G156978 NA non-coding upstream 6455 12055246 ~ 12061368 (-)
G156973 NA non-coding upstream 12656 12061447 ~ 12064715 (-)
G157012 NA non-coding upstream 50176 12098967 ~ 12099726 (-)
G157035 LOC107737586,LOC107672037,LOC107712704 non-coding upstream 102569 12151360 ~ 12156300 (-)
G157036 NA non-coding upstream 108611 12157402 ~ 12158314 (-)
G156985 NA other downstream 122466 11922844 ~ 11924650 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other downstream 189148 11763709 ~ 11857968 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other downstream 245484 11799922 ~ 11801632 (-)
LOC122328546 rpl10 other downstream 300496 11741400 ~ 11746620 (-)
G157367 NA other upstream 1092287 13141078 ~ 13217408 (-)
G157373 LOC107591099,LOC107703059,LOC107737560 other upstream 1231465 13280256 ~ 13282327 (-)
zbtb48 LOC107673103,LOC107716144,LOC107591072,LOC107687447,LOC107737528 other upstream 2174018 14222809 ~ 14233051 (-)
G157909 LOC107673054,LOC107737519,LOC107716153,LOC107591065 other upstream 2278175 14326966 ~ 14330784 (-)
fitm2 LOC107673062,LOC107737511,LOC107568407,LOC107564660,LOC107716178,LOC107668335 other upstream 2521556 14570347 ~ 14589622 (-)

Expression


Co-expression Network