ptk6b (LOC107719912,LOC107672013,LOC107747980,LOC107657056)


Basic Information

Item Value
gene id ptk6b
gene name LOC107719912,LOC107672013,LOC107747980,LOC107657056
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10884466 ~ 10892545 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225172.1
GGCGTGGTTCAGAAAGCGGAAGGTTTCAGTTTTAATGTGAGTTCCCTAAACCAATCGCTTCAGATGGGAATCCGCTAGCAGGTGTCTCTCGGGGACGGTTTTATCTCATGGGGGAATGTTTGAGGAAAACGTTCCCGTGTCTCAAGACATTATGGGACAGGATATACGGACCCTCGCAGATCGACGGAGAAAACAGCGTGAAGACTGACAGCGACTGTAACGACGATGGGCTCGGTGAGCGTTACGGGCAACCGGCGAGCGCGCCTCTGCCGCCGCGGAAGACGGGCGACGCCGCGCTTTACACGGCTCTGTGGGACTTTGAGGCTCGCGACGGCCAGGAGTTGTCCTTCAAAGCTGGCGACGTGTTAGAGGTCGCCAGCAGTTCCGGTGACTGGTGGAGTGCGACGAAAACCGACTCGCACGGGCGCGTGGCCGCCGGTTTTGTGCCGTTCAATTATTTGGCGCGGGAGTCCGTGGAGTCTCAGCCgTGGTTTTTTGGAAAGATGAGCCGTGTTGAGGCATTGAGTCACCTCATGTCAGCAGAAAATGATAACGGATCCTTTCTTGTGCGAATCAGTGAGACTGACAGCATGAGCGTactctcagTGAAATCACAAACCAAAGCAAAGCACTTCAAGATCTACCATAATAGCGGTCAGTTCTATGTGGATCCATCTTCTCTGTTTGGCAGTGTATTAGAGATGATTGAATATTACCAAACTCACTCGCTCTCCACTTCGGATTTACTCAGGAAACCCTGCATTCGGAAAATGCCACGGGTTCTTCCACCCCCCTCAGTCGATGAATGGGAACTGCCTAAAGAACAATTTACCCTTGAGAAGCTGCTCGGCGGTGGTCACTTTGCTGATGTTTACAGCGGCAGGTGGAAAAATCACACTAAAGTGGCTGTCAAAATTCTCAAGAACAATGATGCTCTTGTGCAGAAGGACTTTCAGCTGGAGGTGCAGATCATGAAACGTTTTCGTCACAGGCACTTGATTTCTCTCTTTGCCGTCTGCACTTCCTCTGTCCCATTTTACATCGTCACCGAACTAATAGAGAAGGGAGACCTGCTTAATTTCCTCAAAAATCCGGAGGGTAGGGCACTGGATATGGAGTGTCTGATCGACATGGCAGCTCAAGTGGCAGATGGAATGGAGTATTTAGAGGCCAATAACAGTATTCATAGAGACCTCGCAGCAAGAAATGTTCTAGTTGGAGAGGGATACATCTGCAAAATTGCTGATTTTGGCCTCGCTCGAGTCGTTAAGGAACCTGTTTATATATCTGATGACAAGAAAATCCCATATAAGTGGACCGCACCGGAGGCTATCGGTCATGGTCGTTACTCAGGCAAATCTGATGTCTGGTCATTTGGGATTCTGCTTTATGAAATAGTTACATATGGCTCAGTACCTTATCCAGGTGTCCGTAACTGCGACGTGTTTCATCTCGTCGCGCGAGATAACTACAGAATGCCTTCGCCACCTCACTGTCCACAGGTCATTTATAACATCATGCGATCTTGCTGGAAAGCAGAGCCAGAGGACCGTCCAACTTTTTCTATTCTGAGGCATGAACTAGAAAACTATCAAGGTGACTGAAGGCACTTGCAAACATCCTGTGGTCTTAAACTCttatatagcaaaaaaaaaagactgaccTTGGACAAATCTTAAAGACTGATGCATCATGCAAATATCTTGGATTAGTCTACTATATCAGTTTTCAGATAAACAGGAAGATGCACTTATAAAGCACTTTTCTTtggatttatttatgtttaaagcaATTTTTGACAGAATTTTATGAGATTCTGGTATTGTTAATTTCTTTGTAATAAACGTTGTTCTCAggtaaagtgtaaaaaaaagtgtttttaaatattaaatcagtgGATGAATGTTTCCTCTTTTTAAACCCCTAATTCAAATATGAAAGCAATGTAGTGgaatatttcctttttaaattttaattttcagcatgaaGCTAGattaatgtgacaaaaaaagcatatgCAACTTGCTATAAATCAACATAAAAGAATTCATGCTTTATGCtggtttttatactttaaatattgtGTGGTACTTTCATGACAATTTGACATtgccaaaaaaagaagaaaaaaaacgactttgatttaaaagggtttttttgAGTGACGAGGCAATGGCATTACGTGAGAAAATAGTAATGATAGGGCAGGATTGCTATCatatgtgaatttttatttgagaTAAAAGCGTTTATTCGTTTTGGCAAATGGCAtagtcataaaaatattaatataacatttgtgTTATTGAACTTGGTTCCTTGGGAATGGGAACCAATGAATCAGCGCTGTACAATATGACATGTGACCAGCAGATGGCGCCACACCATTATTTCAGCGGTGATCTGTAGTATGCATCCAagtctgtgttttttatttggatttatttagcTGCAAATCTTTTACTCTTAGCATGAATATAATAAAGCAtgtaacaacataaaaatga

Function

NR:

description
PREDICTED: protein-tyrosine kinase 6-like isoform X4

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004713 protein tyrosine kinase activity molecular_function

KEGG:

id description
K08894 PTK6, BRK; protein tyrosine kinase 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225172.1 True 2507 mRNA 0.43 9 10884466 10892545

Neighbor

gene id symbol gene type direction distance location
srms zgc:194282,srms,LOC107672012,LOC107560891,LOC107657057,LOC107747981,LOC108435233,LOC108276248,LOC107563676 coding upstream 163 10874824 ~ 10884303 (+)
nol4lb nol4lb,nol4l,LOC107672011,LOC107563666,LOC107657055 coding upstream 13715 10786884 ~ 10870751 (+)
commd7 commd7,LOC107671961,LOC107603136,LOC107747977,LOC107719919,LOC107563668 coding upstream 112267 10765862 ~ 10772199 (+)
LOC122328564 LOC107707753,LOC107672006,LOC107603149,LOC107657067,LOC107559477,LOC107747970 coding upstream 225719 10646963 ~ 10658747 (+)
LOC122328734 sdcbp2,LOC107657068,LOC107672005 coding upstream 317809 10555276 ~ 10566657 (+)
trnae-cuc_40 NA coding downstream 9524 10902069 ~ 10902140 (+)
gid8b gid8b,gid8,LOC107560896,LOC108266002,LOC101169608,LOC108276161,LOC108231957,LOC106566597 coding downstream 42418 10934963 ~ 10938573 (+)
slc17a9b slc17a9b,slc17a9,LOC107563661,LOC107560897,LOC106600547 coding downstream 46850 10939395 ~ 10948900 (+)
rnd1a rnd1a,LOC107657046,LOC107737660,LOC107563659,LOC107560900,LOC107672025,LOC103027302,LOC108435239 coding downstream 148535 11041080 ~ 11049656 (+)
prim1 prim1,LOC107741309,LOC107671973 coding downstream 165614 11058159 ~ 11062247 (+)
G156432 NA non-coding upstream 156236 10727933 ~ 10728230 (+)
G156431 NA non-coding upstream 157302 10726918 ~ 10727164 (+)
G156417 NA non-coding upstream 181373 10702729 ~ 10703093 (+)
G156413 NA non-coding upstream 187908 10696302 ~ 10696558 (+)
G156398 NA non-coding upstream 210318 10666861 ~ 10674148 (+)
G156551 NA non-coding downstream 141246 11033791 ~ 11035495 (+)
G156572 NA non-coding downstream 231547 11124092 ~ 11126634 (+)
G156568 NA non-coding downstream 256318 11148863 ~ 11152047 (+)
G156590 NA non-coding downstream 318496 11211041 ~ 11243036 (+)
G156592 NA non-coding downstream 326490 11219035 ~ 11313603 (+)
G156414 LOC107707743,LOC107747988,LOC107671949,LOC107559475 other upstream 183571 10698798 ~ 10700895 (+)
G156399 LOC107707753,LOC107672006,LOC107603149 other upstream 312220 10563344 ~ 10572246 (+)
LOC122329061 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other upstream 329746 10551097 ~ 10554720 (+)
LOC122328447 LOC107603155,LOC107707751,LOC107672009 other upstream 365715 10514979 ~ 10518751 (+)
LOC122328383 tbx15,tbx18,LOC107712261,LOC107708785,LOC107656541 other upstream 457304 10415663 ~ 10427162 (+)
G156497 trim101,LOC107671958,LOC107560876,LOC107719918,LOC107656995,LOC107747989 other downstream 21359 10913904 ~ 10923988 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other downstream 184609 11077154 ~ 11085604 (+)
G156586 NA other downstream 281876 11174421 ~ 11177033 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other downstream 804869 11697414 ~ 11746570 (+)
LOC122328549 smim4,LOC107560937,LOC107671967,LOC107737614,LOC107712735,LOC107699582,LOC107570283 other downstream 838435 11730980 ~ 11732361 (+)

Expression


Co-expression Network