birc5b (birc5b,LOC107571769,LOC107708796,LOC107695794,LOC107716091,LOC107586566,LOC107681933)


Basic Information

Item Value
gene id birc5b
gene name birc5b,LOC107571769,LOC107708796,LOC107695794,LOC107716091,LOC107586566,LOC107681933
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 16334501 ~ 16335613 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225265.1
cgAAATGTCGGCTTAAATGACGCAACGCAACACGCGTCGATACGTCGTGAGTTTGATATCTCGTTTTACATCCCGTTTCCTTCCGTTTATCCTCTGATGAGCTGTCAGCGATTCATCAATCAATAAACGCCCGACCAATTAAACACCCTTTAAAAAACGCTTTCGGCGAGGATCGTCGCGGTCTGGCGGTGCTTCGGAAATGTCTAACGCGGAAGTCATTGCTTCCCGGCTTTTGACGTTTAATAAGATGTATAGTTATGAAAAGCGACTGCAGACTTTTTCCGACTGGCCTTTTCGAGAAAACTGCCAATGCACACCAGAGTTGATGGCTAAGGCAGGTTTTGTGCACTGCCCTAATGAGAATGAGCCAGACGTAGCCTGCTGTTTCTACTGTCTTAAAGAGCTGGAGGGCTGGGAGCCAGAAGACAACCCCTGgtACGAACATTCAAAGCGCTCCCCCGACTGTGCCTTTCTTCATATGAATAAGACATTTGAAGAGCTCACAGCCATCGAGTACTTTCAGCTGGAACAGGAGCGACTTCGCATCTACATTAGGAAGATGGGTCACAGGAAGATCGCTTTATTTCGCGATGAGGTGGAGACCACTATCAAAAATCTGAAAGCTCTTATTTGATATCTGGTGatgttaaatttgttttaatcgTGCACCGTTTGTCAACTTgaaccaataaaataaatggttttgttttggtaA

Function

symbol description
birc5b Predicted to enable cysteine-type endopeptidase inhibitor activity involved in apoptotic process. Acts upstream of or within several processes, including circulatory system development; nuclear division; and regulation of apoptotic process. Predicted to be active in cytoplasm; nucleus; and spindle microtubule. Is expressed in several structures, including axial blood vessel; caudal vein plexus; intermediate cell mass of mesoderm; nervous system; and unfertilized egg. Human ortholog(s) of this gene implicated in prostate cancer and transitional cell carcinoma. Orthologous to human BIRC5 (baculoviral IAP repeat containing 5) and BIRC7 (baculoviral IAP repeat containing 7).

NR:

description
baculoviral IAP repeat-containing protein 5.1-like

GO:

id name namespace
GO:0030953 astral microtubule organization biological_process
GO:0007507 heart development biological_process
GO:0045766 positive regulation of angiogenesis biological_process
GO:0090307 mitotic spindle assembly biological_process
GO:0030182 neuron differentiation biological_process
GO:0043066 negative regulation of apoptotic process biological_process
GO:0001570 vasculogenesis biological_process
GO:0007058 spindle assembly involved in female meiosis II biological_process
GO:0007080 mitotic metaphase plate congression biological_process
GO:0051311 meiotic metaphase plate congression biological_process
GO:0043523 regulation of neuron apoptotic process biological_process

KEGG:

id description
K08731 BIRC5; baculoviral IAP repeat-containing protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225265.1 True 715 mRNA 0.45 4 16334501 16335613

Neighbor

gene id symbol gene type direction distance location
c1galt1a c1galt1a,LOC107708852,LOC107571731,LOC107586568,LOC107695751,LOC107716090 coding upstream 93577 16235766 ~ 16240924 (+)
slc26a10 slc26a10,LOC107708797,LOC107681935,LOC107716215,LOC107586569,LOC107695728,LOC107570587 coding upstream 112455 16213956 ~ 16222046 (+)
arhgef25a arhgef25a,LOC107570569,LOC107708856,LOC107681953,LOC107716212,LOC107695729 coding upstream 145976 16130101 ~ 16188525 (+)
kmt2d kmt2d,LOC107681934,LOC107695802,LOC107716211 coding upstream 251499 16050565 ~ 16083002 (+)
dhh dhh,LOC107708800,LOC107571723,LOC107716210,LOC107681955,LOC107563640,LOC107695806 coding upstream 285593 16043260 ~ 16048908 (+)
zgc:153867 zgc:153867,LOC107586536,LOC107570608,LOC105897346 coding downstream 18109 16353722 ~ 16360814 (+)
huwe1 huwe1,LOC107716223,LOC107586534 coding downstream 68299 16403912 ~ 16439274 (+)
l1cama LOC107708848,LOC107681982,LOC107570628,LOC107716224,LOC107586533,LOC107695787 coding downstream 109508 16445121 ~ 16490079 (+)
smc1a smc1a,LOC107716226,LOC107695786,LOC107586531 coding downstream 159343 16494956 ~ 16505598 (+)
srm srm,LOC107716095,LOC107708792,LOC107586563,LOC107681959,LOC107695748,LOC107570652 coding downstream 170309 16505922 ~ 16510329 (+)
G158117 NA non-coding upstream 368737 15964752 ~ 15965764 (+)
G158115 NA non-coding upstream 385080 15896647 ~ 15949421 (+)
G158113 NA non-coding upstream 396630 15934939 ~ 15937871 (+)
G158110 NA non-coding upstream 452609 15880663 ~ 15881892 (+)
G158074 scn8aa,LOC107695818,LOC107563626 non-coding upstream 506568 15818461 ~ 15827933 (+)
G158423 NA non-coding downstream 203923 16539536 ~ 16539832 (+)
LOC122328367 NA non-coding downstream 210228 16545841 ~ 16573057 (+)
G158430 LOC107660256 non-coding downstream 213626 16549239 ~ 16549606 (+)
G158434 NA non-coding downstream 219804 16555417 ~ 16555642 (+)
G158437 NA non-coding downstream 273212 16608825 ~ 16611041 (+)
G158152 rps26,RPS26,rps26l,LOC107563646 other upstream 250972 15983670 ~ 16083529 (+)
G158162 dnajc22,LOC107708801,LOC107716089,LOC107563648,LOC107571715,LOC107695753 other upstream 311107 16022199 ~ 16023394 (+)
G157620 NA other upstream 1029951 15300704 ~ 15304550 (+)
G157656 megf11,LOC107583869,LOC107672222,LOC107596974,LOC107686294 other upstream 1338356 14992350 ~ 14996145 (+)
LOC122328907 mef2d,LOC107741762,LOC107549240,LOC107717782,LOC107597970,LOC107663114,LOC107689865 other upstream 1576284 14725910 ~ 14758217 (+)
LOC122328571 kmt2d,LOC107681934,LOC107716211,LOC107695802,LOC107563643 other downstream 246357 16581970 ~ 16607408 (+)
G158446 atf7a,LOC107563644,LOC107570410,LOC107745462,LOC107681998 other downstream 285585 16621198 ~ 16664314 (+)
LOC122328551 atf7b,atf7a,LOC107711055,LOC107585125,LOC107740570,LOC107667392,LOC107673513,LOC107582698,LOC107681998,LOC107716199,LOC107745462,LOC107570410,LOC107563644,LOC107695816 other downstream 299833 16635446 ~ 16669648 (+)
G158486 NA other downstream 395733 16731346 ~ 16732884 (+)
G158524 NA other downstream 746592 17082205 ~ 17082655 (+)

Expression


Co-expression Network