XLOC_006826 (ppp2r5eb)


Basic Information

Item Value
gene id XLOC_006826
gene name ppp2r5eb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 37421333 ~ 37465542 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013130
ACTCAGCCCAGTAATATTGACAATAGGGCGAAAAAGGGACCGATATTCCctaagaaaacatatttttggatACAAATAACCTGCAAACGCGGCGTGTGGATATAAAGAGAGGCCTTGAAGGAGGAAAGACGGTTAAAAACACTCAAATCAGTTCCTCACATCGAAAACATCAAGGGCTATGTCCTCCGCAGCCACCACTCCTCCATCAGTGGATAAAGTAGACGGATTCTCCCGGAAGTCTGTCCGGAAGGCCAAGCAGAAACGTTCTCAGAGTTCCTCACAGTTCCGCTCTCAGGGCAAACCAATCGAGCTCACACCTCTTCCCCTGCTCAAAGACGTCTCTGCTCAGGAGCAGCCGGAGTTGTTCCTGAAGAAACTTCAGCAGTGTTGTGCTGTGTTTGATTTTATGGACACTCTGTCAGACCTGAAGATGAAAGAATACAAGCGCTCAACCCTCAATGAGCTTGTCGATTATGTCACAGTCAGCCGAGGATACCTCACAGAACAGGCCTACCCAGAGGTCGTCAAAATGgtGTCCTATAATATATTCCGAACTCTTCCGCCCAGTGACAGTAATGAGTTTGATCCTGAGGAGGATGAACCCACTCTAGAGGCCTCGTGGCCACATTtacagCTGGTGTATGAGTTCTTCATTCGGTTTTTGGAGAGTCAGGAGTTTCAGCCCAGCATTGCCAAAAAATACATAGACCAGAAATTTGTCTTACAGCTGCTGGAGTTGTTCGACAGCGAGGACCCACGAGAAAGAGATTACCTGAAGACAGTCTTACACAGAATCTATGGAAAATTCCTGGGACTGAGAGCTTTTATACGaaaacagataaataatatttttctacgTTTTGTTTATGAAACTGAGCACTTCAATGGAGTCGCAGAATTGTTGGAGATTTTGGGCAGTATCATCAATGGCTTCGCTCTGCCGCTGAAAGCTGAACACAAACAGTTTTTGGTGAAAGTTTTGATTCCTCTTCACACCGTCAGGAGCCTCTCACTTTTCCACGCACAGCTGGCGTATTGTATTGTACAGTTCCTAGAGAAAGACCCGGCATTAACAGAACCAGTTATTAGAGGTCTGCTGAAATTCTGGCCTAAAACCTGCAGTCAGAAAGAGGTCATGTTCCTAGGAGAGTTGGAGGAGATTCTGGATGTGATTGAGCCTACGCAGTTTGTGAAGATCCAGGAGCCTCTCTTCAAACAGATCTCCAGATGTGTCTCTAGTCCTCACTTTCAGGTGGCTGAGAGAGCTCTGTACTACTGGAATAATGAGTACATCATGAGTCTGATTGAGGAGAACTCCAACGTGATTCTTCCAATAATGTTCGCCAGTCTTTACCGGATCTCCAAAGAACACTGGAACCCGGCCATAGTAGCTTTAGTCTATAATGTTCTGAAGGCCTTCATGGAAATGAACAGCACTTTGTTTGATGAACTCACGTCCACTTACAAGTCAGATCGTCAGAGGGAGAAGAagaaagagaaggagagagaggagCTGTGGAAGAGGTTGGAAGATCTGGAGTTGAAGAGAAGCCTCCAGACCGATGGAATTATTCCCACTTAACGAAGCGCTTCTCCTGGACCGCTTTTTCCCCCAACGCCTCCACCACACGCTCGGAACGTTGGccacatttcttttttcttttttgtatttgtgCGACTTACTTTACCGTAGAATCACCTCGTCAGTCTCATTATTTCAAAAGcactgtaaataacttttattttatcctctctttttttttctctctctcttcccccTTAAAAATATAAAGCCGAAAAAGAACGTGACTAGAaaaggaagtaaaaaaaataaaaatacgcaaaaaaataaataaacccacaCTGGAGGGGAATGGACTTTGAACAGACAGTAGGACTGAAACGAACGACTGCTGTTAAGAAAACGAAACAGAATCTCAACCCACCGATCTGACATACCTCACCCATTCTTGCTGAACAACACCAGCCcaattctctctctttctccctctttcCTTACTCACTCCATCTCTTTCTCTTCCTCCTCATCTCAGCATTGGATCAACATCGGCCCACCTGCGTGTCCTGAATATCTGAAAGCAGAATTGTCTACCGTTGACCTTTTTTGATTGTCCTTCAACATCTGGATAAACGCTGCAGGTCTGGATTGTAGGCTGCTTCAAAGGGGACACTATGCAGTAACCAGCAGAGAAGAGGAAGTGGACatatgtaacacacacacacaccagctcttTTTAATTTTCCTCCCCTtttcgttctttcttttttttttttcctgtccaAATGTGCCACCTGGTATACTTGTTTGGACTCTTTAGCACCAGTCCGGTACTGGTACCAGTAaatgagagacacacacacacacgtacacacatctGAGGGAGTGTTCTGAATTCCAGCAGCAAATCGGAGATGCTTGTCATAAGAAACGGAActgcacgtgcacacacacacattctgcgTTCGAGTGTGTGAGGGAGTTTCTTACAGTGTTAAGTACCTGTATACTGTATCTGACTGCAGTACTTTGATACTCTGTATCTAGTAGAACCTTTAGCGTATTTTTCTTTAGGAGAATCCAGTATATGATGAGGAAAGTTCGAACACGGCCTCTTGGGATTtacgttttctttctttctcggGTTTCACTTCTAATTTGTTttgggtttatttttattttgtctggatttggttttttttttttttctttttgaccaAGTGGAATTTGTTCTCTctcttcctttttattttttacttagttGCTGATTGGGGGAGGGGGGTGAGTGAGAGCGGGATTGTGGAGGACTGATGCTGTGGTGAGCTGTGTCAGAATTGAAACCTGTGCTTTAGAAAGCCCCAGACATCAAACGATTACAAAAGTTAAAAAGGGTCGGAGAAatacaaatgtttaattattttaaaaaataaagagatATTAAATTAAACCTGTTTTGTGATAAAGATGAAA
>TCONS_00013131
GTGTTATGTGTGCCATGGACTCAGCCCAGTAATATTGACAATAGGGCGAAAAAGGGACCGATATTCCctaagaaaacatatttttggatACAAATAACCTGCAAACGCGGCGTGTGGATATAAAGAGGTACCCGGGGATGTTCGTATTTCAGCTGGATCTATTTCTATCGTCGGAAAATTGAGTGTTTGATGGGATTATTGCTGTGGGTTTGGCAGTTTTTAAGGCCAAAAACggattttgtgtctttatttttatttttctgctgcttcAAGAGGCCTTGAAGGAGGAAAGACGGTTAAAAACACTCAAATCAGTTCCTCACATCGAAAACATCAAGGGGCTATGTCCTCCGCAGCCACCACTCCTCCATCAGTGGATAAAGTAGACGGATTCTCCCGGAAGTCTGTCCGGAAGGCCAAGCAGAAACGTTCTCAGAGTTCCTCACAGTTCCGCTCTCAGGGCAAACCAATCGAGCTCACACCTCTTCCCCTGCTCAAAGACGTCTCTGCTCAGGAGCAGCCGGAGTTGTTCCTGAAGAAACTTCAGCAGTGTTGTGCTGTGTTTGATTTTATGGACACTCTGTCAGACCTGAAGATGAAAGAATACAAGCGCTCAACCCTCAATGAGCTTGTCGATTATGTCACAGTCAGCCGAGGATACCTCACAGAACAGGCCTACCCAGAGGTCGTCAAAATGgtGTCCTATAATATATTCCGAACTCTTCCGCCCAGTGACAGTAATGAGT

Function

symbol description
ppp2r5eb Predicted to enable protein phosphatase activator activity. Predicted to be involved in protein dephosphorylation. Predicted to act upstream of or within signal transduction. Predicted to be part of protein phosphatase type 2A complex. Predicted to be active in cytosol and nucleus. Orthologous to human PPP2R5E (protein phosphatase 2 regulatory subunit B'epsilon).

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0031952 regulation of protein autophosphorylation biological_process
GO:0007165 signal transduction biological_process
GO:0005829 cytosol cellular_component
GO:0000159 protein phosphatase type 2A complex cellular_component
GO:0005634 nucleus cellular_component
GO:0019888 protein phosphatase regulator activity molecular_function
GO:0072542 protein phosphatase activator activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030904-6 Predicted to enable protein phosphatase activator activity. Predicted to be involved in protein dephosphorylation. Predicted to act upstream of or within signal transduction. Predicted to be part of protein phosphatase type 2A complex. Predicted to be active in cytosol and nucleus. Orthologous to human PPP2R5E (protein phosphatase 2 regulatory subunit B'epsilon).

Ensembl:

ensembl_id ENSDARG00000069118

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013130 False 2989 mRNA 0.43 15 37421333 37465524
TCONS_00013131 True 746 mRNA 0.46 4 37430202 37465542

Neighbor

gene id symbol gene type direction distance location
XLOC_006825 kcnh5b coding downstream 37708 37302575 ~ 37383625 (-)
XLOC_006824 syne2b coding downstream 166556 37248998 ~ 37254777 (-)
XLOC_006823 si:dkeyp-77c8.5 coding downstream 192088 37227050 ~ 37229245 (-)
XLOC_006822 si:dkeyp-77c8.4 coding downstream 210964 37208460 ~ 37210369 (-)
XLOC_006821 si:dkeyp-77c8.3 coding downstream 221213 37199298 ~ 37200120 (-)
XLOC_006827 wdr89 coding upstream 3551 37469093 ~ 37474989 (-)
XLOC_006828 sgpp1 coding upstream 26262 37491804 ~ 37519817 (-)
XLOC_006829 NA coding upstream 62619 37528161 ~ 37535785 (-)
XLOC_006830 syt16 coding upstream 77956 37543498 ~ 37545487 (-)
XLOC_006831 snapc1b coding upstream 120949 37586491 ~ 37600600 (-)
XLOC_006471 BX537274.2 misc downstream 27156428 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 36595108 825904 ~ 826225 (-)
XLOC_006819 AL845493.1 non-coding downstream 242617 37178602 ~ 37178716 (-)
XLOC_006817 NA non-coding downstream 310797 37110212 ~ 37110536 (-)
XLOC_006815 NA non-coding downstream 409097 37009812 ~ 37012236 (-)
XLOC_006814 NA non-coding downstream 423573 36995633 ~ 36997760 (-)
XLOC_006804 BX927407.1 non-coding downstream 809174 36587770 ~ 36612159 (-)
XLOC_006836 NA non-coding upstream 167084 37632626 ~ 37636598 (-)
XLOC_006842 NA non-coding upstream 724979 38190521 ~ 38195214 (-)
XLOC_006843 NA non-coding upstream 1147683 38613225 ~ 38619719 (-)
XLOC_006846 BX323574.1 non-coding upstream 1387595 38853137 ~ 38853252 (-)

Expression


Co-expression Network