emd (LOC107737610,LOC107671981,LOC107712726,LOC107560939,LOC107699568,LOC107570273)


Basic Information

Item Value
gene id emd
gene name LOC107737610,LOC107671981,LOC107712726,LOC107560939,LOC107699568,LOC107570273
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11796494 ~ 11799916 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225315.1
TCGACGCTCTGACCACGCCCAGCCTCCGCGAGGCGTCAGGAAGTGATGCGCGTCTCCTCCTCCAGCGTGACACGCCCAGCTCAGAAAAGCGCCTTTTTAACGTCCTGGGATCGTTTAAGATGTCTTCATTAAGTGGAAAATCTGATCAGGAGATCATTCAGCTGCTGGATGAATATGGCATTAAACATGGACCCATAGTAGgatCCACACGAAAGCTCTATGAAAAGAAGCTGAATGAAGCCATGACCAAAAAAGCTAAACCTTCCTCGTCTGACAAGACATACTACCGAGAAGAACaggaGGAAGTGGAATATATTACCTATCATCAGTCCcagccaCAACTGAACATGTACGATGGATCAGGTGATGTCACAAGGAGGTCAAGGGTCACCGAAACCGACTTTTCCCATGACATACGGAGGTCAAAGGTGACCGATTACCGAGATGAAGACAAAGGCTATAACAATGAGCCCATTATCAGCCCAACTCGCTTGTCCTATCAGAGTTCTTCTCGGCCAGGCCCATCCGTCTCCAGATCCGTTCAGCACGTTCAGTCCAGTCCAGAGACCAGCAAATCTGGAGGTGTGCCGGGCTGGCTCCGTGTCTTGGTGTTTCTAATCATTGCtgtgtttctttattatgtGTACACATGTATGGAGCCTGCAGAGGAGACCCCCTTTAAAAACCTCCAGTAGAGGAGCATGTTCATCAGCCCCAAACTAAACTGATTCAGTACAAGAACAGCCAAAAACATAGCCTGGAATAAGAGCTAATAATATTCTGAGTACAGAACGTGAGGTTTAGTAAGTCGTAAACGTGTGCATAATGCGCACATTTTTATCCAAATACttgctttgtgcatttttataattaaataggTACAGATGTGGACGACCATATCCATTTTAAgaaaattctgatttttttgGATCATCGGGGCATTAAAGTGTCTTTAAAACGTATTTTCTCATGAGTTGTATGTAAAATCCTTTTGCTGTGGCCGTGTATTTAGGGCTTGTGTTCATGTGCCATTCTGTAGCACTATTTGTTACACCGTTTCAATTTGCTGTCTTCAGTGTTAAaccctttttaaaataaattctgtggTGCTGAACATAAAATGAAAGAGATTCGAGCAAAGAAGTACACAAGCGTATGCtaatttgtgaaaaatagtTACTGTTAAAAGCTATTGTTAGGTACAATGCAATAACCCCTTCAGAGAAGActaaattcacaatattacttaaAGTGCCTTACTAGTGTGGAACATTCTGAAGGGTAAgggttttattaaacaaatgtcTTTCATTACTTTCCTCCTGCTGCTTGTCCCTGACATGTAAACACTACCaaagtttatatatgtattgttcTTACAAGAATtttagatgaataaaacatttctcattttgcaAAATGATTGAAGGCAAAAAGATGCCCAAAAACTTCTTAAATCCCCAACGTTTGCTTGAAAAAATGTACTGTctttaaaaagatttgaaatgttatctaataaagttacatttgtga

Function

NR:

description
PREDICTED: emerin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225315.1 True 1533 mRNA 0.41 8 11796494 11799916

Neighbor

gene id symbol gene type direction distance location
flna flna,LOC107737611,LOC107712729,LOC107570276,LOC107699576 coding upstream 1761 11762429 ~ 11794733 (+)
dnase1l1 dnase1l3,LOC107737612,LOC107672041,LOC107560934,LOC107570280,LOC107712731 coding upstream 54623 11738795 ~ 11741871 (+)
abhd6b abhd6b,LOC107737716,LOC107712730,LOC107560889,LOC107671974,LOC107699577 coding upstream 70002 11723156 ~ 11726492 (+)
flnb LOC107737717,LOC107560870,LOC107671935 coding upstream 74208 11705759 ~ 11722286 (+)
slmapb slmapb,LOC107560933,LOC107712736,LOC107699575 coding upstream 92104 11695816 ~ 11704390 (+)
cfap126 NA coding downstream 66802 11866718 ~ 11868437 (+)
tnnc1b tnnc1b,LOC107671989,LOC107568847,LOC108276054,LOC107593406,LOC105890642,LOC103374679 coding downstream 122968 11922884 ~ 11924595 (+)
tnnc2.1 si:rp71-17i16.4,LOC107737591,LOC107568845,LOC103044939,LOC108434838,LOC103362008,LOC102782874 coding downstream 248845 12048761 ~ 12060362 (+)
tnnc2.2 tnnc2,LOC107699597,LOC107593400,LOC107672048,LOC107737590,LOC107568846,LOC108276484,LOC108233126,LOC108434847,LOC102220434 coding downstream 261800 12061716 ~ 12064341 (+)
slc35c2 slc35c2,LOC107737589,LOC107712705,LOC107672033,LOC107699599 coding downstream 267189 12067105 ~ 12074465 (+)
G156828 NA non-coding upstream 61557 11734256 ~ 11734937 (+)
G156701 NA non-coding upstream 140114 11655795 ~ 11656380 (+)
G156700 NA non-coding upstream 141178 11654916 ~ 11655316 (+)
G156699 asb14b,LOC107560887,LOC107671999,LOC107737718 non-coding upstream 141877 11654255 ~ 11654617 (+)
G156698 asb14b,LOC107671999,LOC107560887,LOC107737718,LOC108276494 non-coding upstream 142334 11653380 ~ 11654160 (+)
G156843 tktb,LOC108410447,LOC107671986,LOC103046877,LOC107737598 non-coding downstream 27825 11827741 ~ 11926375 (+)
G156881 LOC107737595,LOC107671985,LOC107568839 non-coding downstream 146768 11946684 ~ 11972922 (+)
LOC122328486 NA non-coding downstream 230230 12030146 ~ 12037888 (+)
G156933 NA non-coding downstream 374614 12174530 ~ 12174915 (+)
G156931 NA non-coding downstream 404340 12204256 ~ 12205395 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other upstream 49924 11697414 ~ 11746570 (+)
LOC122328549 smim4,LOC107560937,LOC107671967,LOC107737614,LOC107712735,LOC107699582,LOC107570283 other upstream 64133 11730980 ~ 11732361 (+)
G156586 NA other upstream 619461 11174421 ~ 11177033 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other upstream 710890 11077154 ~ 11085604 (+)
G156497 trim101,LOC107671958,LOC107560876,LOC107719918,LOC107656995,LOC107747989 other upstream 872506 10913904 ~ 10923988 (+)
LOC122328708 LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419 other downstream 446277 12246193 ~ 12251982 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other downstream 2294162 14094078 ~ 14126201 (+)
si:dkey-151g10.3 LOC107737519,LOC107716153,LOC107593909,LOC107668334,LOC107673054 other downstream 2499785 14299701 ~ 14343274 (+)
pkig pkig,LOC107737509,LOC107673080,LOC107574720,LOC107564651 other downstream 2803877 14603793 ~ 14636817 (+)
itih6 LOC107737505,LOC107673092,LOC107574689,LOC107695841,LOC107716181,LOC107564649 other downstream 2809613 14609529 ~ 15153978 (+)

Expression


Co-expression Network