ptges3a (ptges3a,ptges3,LOC107745455,LOC107570321,LOC107716195,LOC107695820,LOC107571786)


Basic Information

Item Value
gene id ptges3a
gene name ptges3a,ptges3,LOC107745455,LOC107570321,LOC107716195,LOC107695820,LOC107571786
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 15724783 ~ 15729206 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225319.1
GAAGTCACTAGAAACGTTGAGATGATGCGTCACTGCGCGCGGCGCCAGTGAGTAGACACGCGCGGGTCCTGTGCAGGTTGACAGAGCGGCGCATAAACAGCTAGCTTCCGTCTTTATGCATTCGTTTTGATCTGACAGCACAGTTTCCAAACACTACCCAAGGCGAGAGGACGCGGGTGGCAACGCAGATTTTGGTGAAAACTGAAAGAAGATATCGACATGCAGCCAGCAACTGCCAAGTGGTATGACAGACGGGAGGCTGTCTTTATCGAATTCTGTATAGAAGACAGCAAAGATGTCCAAGTTAAATTTGACAAAACAAAGCTTGATTTCAGTTGTGTTGGAGGTACAGATAACGTGAAACACCATAATGAAGTAGAACTATTTGAGTCCATTGACCCAAATGAGTCTAAACACAAACGCACAGACAGGTCTGTGTTTTGCTGTCTAAGAAAAGCAGAACCTGGCAAGTCTTGGCCAAggttaacaaaagaaaaaacaaagCTTAATTGGCTCGGTGTTGACTTCAATAACTGGAAGGACTGGGAGGATGACTCAGATGAAGAATTGTCCAGTTTTGACCGTTTTTCAGAGatgaTGAACAACATGGGTGGGGAAGATGACCTGCCAGATGTGGATGGTGCAGATGATGAGGAGTCTGCAGATAGTGATGATGAAAAAATGCCAGACCTTGAGTAAAGGGAAGAGCAAACCGTCATGCAGAAGAAAGCAAGAATTTTCACTTAACACTTAAATGAAGAGAGAGACTAAGTTTGAGTTGGTAGCCATTTAAAAATTGCATCGTTTTTGAAACTGTTTTTCAAGGTCTTTCTGCAGAAAGTCACAAGGGATGAATTTTTACTGTTGTGTTGATGGCAACGTCAGCCCTTCGACAATACACTCTTTACTTTTCTGTTCTGCATGGACAATTACAAGCTCTCAATGATGTATTGTGGACACCATTTATGGTCAGTTTACTCAATGGCTTTTACAGTCTTGGGCTTTTTCCTCTATGTCAGTGGGGTTATTGCATCATGTAACGTATACATTGTAAATTGTAGTAATGGAAAAAGGACATGAATGACTTTATCAACATATTCTGCCTTCTCCCTCTCATtcaaactgtacatttttatttaattctgttcttttgtttgtttgtgttgagGCTCAGATTTCCTCGTGTGTGAGCGAAGGAAGCATTGGCACGTGCTGCTTCATTGCAAATGCCAGCCAAGACATTTGATTTTCACTAGTGCTGCATTTGAGATCGGAACGGCGTATTCAAAGCCCTTGCACTGATTCATTGTTCAACCcctgttttatgtgttttagcTGCAGTTTTGCCCCTCGGATAGGTTTGTGTTAATCCGACATGTTCAAAGTACATAGTCCTGTCTGTACACGCTGCTTTATGAATTGATTTCAGGTTGGCAGttagtgtttgttgttttgtatcACACTTAGACGTGTAGCAGGAAATTGTACACTGGTTTCTTCCATATATGTAAAGagaagtaattaaaaaaaaaaagcatatgccTCACCGCTGTACAGAACAAAGGGTAACTTATCAATAGATGACCAATTTGTGTTTGCACTCTTAATATCAATGCAGGTGTGACTAAAAGATGAAAACAATGTTGTGACCTGTCCATTCAGGTTTATAAATTTCAGTTTGTTAAACGCAGTGAGGTTTTTGTCTACATATTTCTAATAAACTGTCTCTAAACAACA

Function

symbol description
ptges3a Predicted to enable Hsp90 protein binding activity; chaperone binding activity; and prostaglandin-E synthase activity. Predicted to be involved in several processes, including cellular protein-containing complex assembly; prostaglandin biosynthetic process; and telomere maintenance via telomerase. Predicted to be active in cytosol and nucleus. Is expressed in digestive system; endoderm; hindbrain neural keel; nervous system; and pronephric duct. Orthologous to human PTGES3 (prostaglandin E synthase 3).
ptges3 Enables several functions, including DNA polymerase binding activity; Hsp90 protein binding activity; and prostaglandin-E synthase activity. Involved in several processes, including cellular protein-containing complex assembly; chaperone cofactor-dependent protein refolding; and positive regulation of cellular metabolic process. Located in nucleus. Part of chaperone complex and telomerase holoenzyme complex. Biomarker of atherosclerosis; breast cancer; and oligodendroglioma.

NR:

description
PREDICTED: prostaglandin E synthase 3-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0050220 prostaglandin-E synthase activity molecular_function

KEGG:

id description
K15730 PTGES3; cytosolic prostaglandin-E synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225319.1 True 1737 mRNA 0.41 8 15724783 15729206

Neighbor

gene id symbol gene type direction distance location
rnd1b rnd1b,rnd1,LOC107745453,LOC107716191,LOC107668562,LOC103037018,LOC108275505,LOC103358261 coding upstream 22540 15691510 ~ 15702243 (+)
cacnb3b cacnb3b,LOC107695823,LOC107570227,LOC107668566,LOC104967530 coding upstream 39735 15673052 ~ 15685048 (+)
zgc:158263 zgc:158263,LOC107716164,LOC107695826,LOC107568456,LOC107668552 coding upstream 116330 15600652 ~ 15608453 (+)
si:ch73-206d17.1 LOC107726152,LOC107571682,LOC107695830,LOC107568454 coding upstream 246172 15475723 ~ 15478611 (+)
ptpn22 LOC107737496,LOC107668554,LOC107570169,LOC107716160,LOC107695833,LOC107564640 coding upstream 386516 15324344 ~ 15338267 (+)
mipa mipa,LOC107745456,LOC107570312,LOC107668565,LOC107695819,LOC107716194,LOC107571785 coding downstream 4480 15733686 ~ 15736220 (+)
LOC122328928 LOC107716074,LOC107563642,LOC107695755,LOC107571700,LOC107687557,LOC107745480 coding downstream 132833 15862039 ~ 15868101 (+)
wnt1 wnt1,LOC107563635,LOC107716204,LOC107695811,LOC107681946,LOC107745472,LOC107570486 coding downstream 265530 15994736 ~ 16000771 (+)
rps26 rps26,RPS26,rps26l,LOC107563646 coding downstream 278410 16007616 ~ 16008734 (+)
lmbr1l lmbr1l,LOC107708860,LOC107681941,LOC107716206,LOC107695807 coding downstream 295017 16024223 ~ 16038514 (+)
G158061 NA non-coding upstream 4777 15717790 ~ 15720006 (+)
G158030 galnt6,LOC107695825,LOC107568460,LOC107745475,LOC107570209,LOC107668563 non-coding upstream 108985 15611607 ~ 15615798 (+)
G157728 LOC107745451,LOC107716070 non-coding upstream 180855 15540793 ~ 15543928 (+)
G157705 NA non-coding upstream 237803 15482672 ~ 15486980 (+)
G157704 LOC107570193,LOC107668567,LOC107695831,LOC107568457 non-coding upstream 242321 15479043 ~ 15482462 (+)
G158056 LOC107695735,LOC107745457,LOC107571782,LOC107668551,LOC107570234 non-coding downstream 11430 15740636 ~ 15741661 (+)
G158068 NA non-coding downstream 15911 15745117 ~ 15746289 (+)
G158074 scn8aa,LOC107695818,LOC107563626 non-coding downstream 89255 15818461 ~ 15827933 (+)
G158110 NA non-coding downstream 151457 15880663 ~ 15881892 (+)
G158115 NA non-coding downstream 167441 15896647 ~ 15949421 (+)
G157620 NA other upstream 420233 15300704 ~ 15304550 (+)
G157656 megf11,LOC107583869,LOC107672222,LOC107596974,LOC107686294 other upstream 728638 14992350 ~ 14996145 (+)
LOC122328907 mef2d,LOC107741762,LOC107549240,LOC107717782,LOC107597970,LOC107663114,LOC107689865 other upstream 966566 14725910 ~ 14758217 (+)
LOC122328914 szrd1,LOC107673108,LOC107716129,LOC107737539,LOC107687433,LOC105899027 other upstream 1010228 14712147 ~ 14714555 (+)
LOC122328906 LOC107673074,LOC107737500,LOC107695835,LOC107716175,LOC107574686,LOC107564653,LOC107576192 other upstream 1038165 14680860 ~ 14686618 (+)
G158152 rps26,RPS26,rps26l,LOC107563646 other downstream 254464 15983670 ~ 16083529 (+)
G158162 dnajc22,LOC107708801,LOC107716089,LOC107563648,LOC107571715,LOC107695753 other downstream 292993 16022199 ~ 16023394 (+)
LOC122328571 kmt2d,LOC107681934,LOC107716211,LOC107695802,LOC107563643 other downstream 852764 16581970 ~ 16607408 (+)
G158446 atf7a,LOC107563644,LOC107570410,LOC107745462,LOC107681998 other downstream 891992 16621198 ~ 16664314 (+)
LOC122328551 atf7b,atf7a,LOC107711055,LOC107585125,LOC107740570,LOC107667392,LOC107673513,LOC107582698,LOC107681998,LOC107716199,LOC107745462,LOC107570410,LOC107563644,LOC107695816 other downstream 906240 16635446 ~ 16669648 (+)

Expression


Co-expression Network