LOC122329124 (masp2,LOC107708846,LOC107571531)


Basic Information

Item Value
gene id LOC122329124
gene name masp2,LOC107708846,LOC107571531
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 16529872 ~ 16539021 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225329.1
AACCAAAAGCACTGTTGTTGTTCAGTGCTGTGTTTACACGGAGCCATTTATTCAGCTAGTTCATTAACCTGGAGGACATTAGAGTTCCGCAGAGGTGATTGggacattttttgtgtgtgtgtgagaagaacTGACTGGCATTCTGGGATAATGAACAGAGTATCTTTGGCATTCGTCACCCTGCTTCCATTAGCATTTGGCTCAGAGCTGACAGGACTATTTGGAAGCTTCACCTCACCAAACTTCCCGAATGCCTATCCTAACAACCAGCGTATGGTGTGGAATATCACAGGACCAGAGGGACACAGATTACGCCTCTACTTTACATATTTTAGCCTGGAGCCTTCTCATCGCTGCGAATATGACTACGTTCAGGTGTTCTCAGAAGGAAATGACACAGTACGGTTCTGTGGTGAGGCAGAGAAAAATTACGGTGATGCGCCCAAAAACACCGTCATCTATTCAGCCGCCAACACCATGTCCGTGCTCTTCAGATCAGATTACTCCAATGAGGACCGATTCACAGGCTTCCAGGCATTTTTTTCTGCCGAAGACATTGATGAGTGCCTGACCACTGTGGATGGAGAGCCTGTGTGTGACCATAATTGCCATAATTATGTGGGGGGCCTTTACTGCACTTGCAGATTGGGATACCAACTCCATGATGATAAGAGACATTGCCCTGCTGAGTGTAGTGGGCAGGTGTTTCAGAAGAGGTCAGGAGAACTGAGCAGTCCAGAGTACCCAGGTGTTTACCCCAAGATGAGCCAGTGTGATTACACTATCAGTTTGATGGAAGGCTTCCAAGTGACCCTCGACTTTCAGGACATATTTGATGTGGAGGCTCATCCTGAAATCCACTGCCCTTATGACATCCTCAAGaTCACAGCAGGTGGAAGGGAGTACGGCCCATTTTGTGGCAAGACCCCACCAAGAAAAATAGAGACGGGAACTCACAAAGTGCATGTGACCTTCCGCTCTGACCACTCGGGGAAAAATAAAGGCTGGAAGATCAAGTATACCAGCACAGCCCAGCCATGTCCAAACCCTGTGGCTCCTCAACATGGAAGCATTCAACCCCAGCAGTCTCAGTACATCATGACGGACACTTTCAATGTCACGTGTGATCTGGGCTATGAGTTAATTCTGGGGGAAGAAGCGTTGCCCTTTTATCAAGCCACATGCCTGAAGGGTGGATTTTGGAATGGACCGATGCCTCGCTGCACCATTGTTGATTGTGGAGATCCTGCAGAAGTGAATAATGCAAGTGTGAAATTCACCACAACCACGTATAAATCAGTGATCAAGTATTCATGCGATGAATTTTACACAGTGAAGGAAGGAACAAATGGAGTATATACATGTGCACACGACGGCTACTGGAGAGATGACCTGGGTGGAAAAATACTCCAGATATGTTCACCCATCTGTGGCCAGCCTGACGCCAAGCTGTCCAAGGTGATTGGTGGGGAGAATGCGGAAAAGAACGAGATTCCCTGGCAGGTCATGATACGTATGGGCCAACGGTTCATCGGTGGAGCTTCTCTTGTTTCTGACAACTGGGTCCTTACTGCTGCTCATGTTCTGAAAAGCTACACAGATACTTCCAACCTCCAGCTGAAGATGGGCATAGTCAAACAACAAGACTCCGAGGCTATAGTTGGCATTCCGGAGAAAATCTTCATTCACCCTCAGTACCATCACGATAATATTAACTTCAACCATGACATTGCCCTGATTAAACTGGAGCATAAGGTACCTGTCAGTAAAGCCGTCATGCCTGTGTGTTTGCCTGGGATTGAAGAGCGGTTTGTTTTGAAGGCTAATAACGTCGGGAAGGTGTCTGGATGGGGTGTGTCAAATGTAAACAGACCTGCGTTATATTCCAATAATCTCCAGTACGTGCTTTTACCCGTCGTTGATTTTGAGGACTGTAAGGCTAAATATGACGCCACAGTGACAGCTAAAGGGAAACTAGTAGTGACAGAAAACATGATTTGTGCTGGGACTTCTGATGGAGGAAAAGACTCCTGTCAGGGTGACAGTGGAGGGCCTTATGCGTTTTTTGACACACAGAGTAAAAGCTGGTTCATAGGCGGTATTGTGTCATGGGGTCACGGATGTGCCCAGCCTGGGTATTATGGGGTTTATACTAAAGTGGGCAGTTATCGCTCATGGATTGAAGAAATCATGTCCAAAAACAGTTGAACAGTGTTGAGATGTTTGACTTTGATATGAATTATTGACCACATTATCTTGACCAAAACAGCTTTGCAAGTAAGACacattttttctgttgttgttttattcatccTTTTTTTGTGCAGCATTTTGGTTGGCATTTGCTGGTTTTagatgtgctatataaataaagtatagGCACGCTATTTtccaaagattta

Function

symbol description
masp2 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within complement activation, lectin pathway and proteolysis. Predicted to be active in extracellular space. Is expressed in liver. Orthologous to human MASP2 (MBL associated serine protease 2).

NR:

description
PREDICTED: mannan-binding lectin serine protease 2-like

GO:

id name namespace
GO:0006956 complement activation biological_process
GO:0006508 proteolysis biological_process
GO:0005576 extracellular region cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K03993 MASP2; mannan-binding lectin serine protease 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225329.1 True 2402 mRNA 0.46 11 16529872 16539021

Neighbor

gene id symbol gene type direction distance location
LOC122328557 sst3,cort,LOC107586562,LOC107695747,LOC107716096 coding upstream 14968 16513107 ~ 16514904 (+)
srm srm,LOC107716095,LOC107708792,LOC107586563,LOC107681959,LOC107695748,LOC107570652 coding upstream 19543 16505922 ~ 16510329 (+)
smc1a smc1a,LOC107716226,LOC107695786,LOC107586531 coding upstream 24274 16494956 ~ 16505598 (+)
l1cama LOC107708848,LOC107681982,LOC107570628,LOC107716224,LOC107586533,LOC107695787 coding upstream 39793 16445121 ~ 16490079 (+)
huwe1 huwe1,LOC107716223,LOC107586534 coding upstream 90598 16403912 ~ 16439274 (+)
LOC122328394 asb8,LOC107745463,LOC107681993,LOC107570421,LOC107563629,LOC107695815 coding downstream 78148 16617169 ~ 16619703 (+)
LOC122328573 NA coding downstream 616174 17155195 ~ 17162236 (+)
rapgef3 rapgef3,LOC107723737,LOC107671875,LOC107598495,LOC107697977,LOC107756413 coding downstream 641851 17180872 ~ 17214492 (+)
dazap2 dazap2,LOC107715036,LOC107671873,LOC107756418,LOC107697974,LOC107594003,LOC107598568 coding downstream 794224 17333245 ~ 17338936 (+)
si:ch211-210c8.6 si:ch211-210c8.6,LOC107756419,LOC107598584,LOC105906836,LOC106567173 coding downstream 810228 17349249 ~ 17354410 (+)
G158117 NA non-coding upstream 564108 15964752 ~ 15965764 (+)
G158115 NA non-coding upstream 580451 15896647 ~ 15949421 (+)
G158113 NA non-coding upstream 592001 15934939 ~ 15937871 (+)
G158110 NA non-coding upstream 647980 15880663 ~ 15881892 (+)
G158074 scn8aa,LOC107695818,LOC107563626 non-coding upstream 701939 15818461 ~ 15827933 (+)
G158423 NA non-coding downstream 515 16539536 ~ 16539832 (+)
LOC122328367 NA non-coding downstream 6820 16545841 ~ 16573057 (+)
G158430 LOC107660256 non-coding downstream 10218 16549239 ~ 16549606 (+)
G158434 NA non-coding downstream 16396 16555417 ~ 16555642 (+)
G158437 NA non-coding downstream 69804 16608825 ~ 16611041 (+)
G158152 rps26,RPS26,rps26l,LOC107563646 other upstream 446343 15983670 ~ 16083529 (+)
G158162 dnajc22,LOC107708801,LOC107716089,LOC107563648,LOC107571715,LOC107695753 other upstream 506478 16022199 ~ 16023394 (+)
G157620 NA other upstream 1225322 15300704 ~ 15304550 (+)
G157656 megf11,LOC107583869,LOC107672222,LOC107596974,LOC107686294 other upstream 1533727 14992350 ~ 14996145 (+)
LOC122328907 mef2d,LOC107741762,LOC107549240,LOC107717782,LOC107597970,LOC107663114,LOC107689865 other upstream 1771655 14725910 ~ 14758217 (+)
LOC122328571 kmt2d,LOC107681934,LOC107716211,LOC107695802,LOC107563643 other downstream 42949 16581970 ~ 16607408 (+)
G158446 atf7a,LOC107563644,LOC107570410,LOC107745462,LOC107681998 other downstream 82177 16621198 ~ 16664314 (+)
LOC122328551 atf7b,atf7a,LOC107711055,LOC107585125,LOC107740570,LOC107667392,LOC107673513,LOC107582698,LOC107681998,LOC107716199,LOC107745462,LOC107570410,LOC107563644,LOC107695816 other downstream 96425 16635446 ~ 16669648 (+)
G158486 NA other downstream 192325 16731346 ~ 16732884 (+)
G158524 NA other downstream 543184 17082205 ~ 17082655 (+)

Expression


Co-expression Network