LOC122329157


Basic Information

Item Value
gene id LOC122329157
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 1395429 ~ 1401790 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225358.1
GCAGGTGCAGGAGTGTCATCAAGCAGCTGTCTGAGAAAGAGAAGGACCCCTACATTCTGGGTTTCGTCTCGCACTTCATCATCATGAGACTGTCTCCAAATCTGCTgctgttcttttctttcctgTCACTTACCGGGGCACAAACAGCAGCTACATTAACATCATCTGCAACAACTGCTTTAAATTCACTTGCATCAACTACACCTGCATCAACTACATCTGCAACAACAACATCTGCATTAAATTCATCTGCAACAACAACCTCTACATTAGCAACACTGGCAGcAGCATCGACGATCTTCTATCCATTTGGTTGGGTGGCTGGAGACACCGAAcgttttattaattacaatgaaAGCTATGATTACGTTGCCTTCTCTACCCCATTTTCATTCTTTGGCCGCACATACAACCACACATATGTTAACAGTAACGGACTCCTTACTTTCAGTCAACCTTCAACTGGAGCTCAAGCTTTCCCTTTACCTGCATATGGAAATGAAGATTACATTGCTCCGCTCTGGACTGACCTCAATGACTTTGGGATGGGTGTTTATTCATATCATCAGTACACAGATGGAAGTGTCCTCACTCGTGCCACACTGGATATAAAGCGATATTTCCCTCAGAGGGCTTTTTCTGCTTCTTGGGTCTTTGTTGCAACATGGGACTATGTTAAAACGCGGAATATAAGTGTATTTAATCTTCACTCAGGACCGgcaGTCAGATTTCAAGCGGTTTTAATTTCAGGAGgtggtttttctttcattctgatTAATTATGGTAACTGTGCTGCCGTATCCTTTCCAGCGGAGGCTGGATATGACACTATAAACTCCACAGACTTCTTTCAGATTCATTGTTCAACTAATGGCAGCTCCATCCCAATCCTCAAGAACTCGACTAACGTAAATGTTCCGGGTCGCTGGGCTTTACTTGTGAACCCCGCGCCAGCACCAGCGATATTTTACCCATTTGGCTCATCAGAAGACACAAGAAATCCTGCTGTTGATGACGGAAGCTCTTCTGTTGTTCAGCTGTCGAgtccatttctattttttggCCGGACATACCGGCAGATTTATATTAATAATAACGGACACATCACATTCAACCAGCCTTCATGGGAATTTGTTCCCTACTCGTTTCCTGCTAATCAAAGTCAGGATATAATTGCTGGTCTCTGGACTGATCTTGACAACCGTGAGAGAGGTGTTGTTTCATATCAGCAGTACACCAGTGGACATGTTCTGACTCGTGCCACTCaggatataaaaacatatttcccAGATCTGAACTTCAACGCTTCTCAGGTCTTTGTTGCAACTTGGGAAAAAGTTGCTTACTACAGCTTAACCACCACAATGGGCCTTCAGAACAGATCGTGGGACACGGGGCTGTCAATTTAA

Function

GO:

id name namespace
GO:0005215 transporter activity molecular_function

KEGG:

id description
ko00860 Porphyrin and chlorophyll metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225358.1 True 1409 mRNA 0.44 10 1395429 1401790

Neighbor

gene id symbol gene type direction distance location
LOC122328434 NA coding downstream 23955 1362002 ~ 1371474 (-)
LOC122329156 nup210,LOC107675171,LOC107684885,LOC107555788,LOC107564796,LOC107736952 coding downstream 50863 1282121 ~ 1344566 (-)
b4galt5 b4galt5,LOC107736963,LOC107684873,LOC107656676,LOC107566184,LOC107725076 coding downstream 210763 1165023 ~ 1184666 (-)
zgc:113278 zgc:113278,LOC107714267,LOC107555798,LOC107736961,LOC107656677,LOC107684897,LOC108427771,LOC105906438,LOC107564801 coding downstream 299991 1087192 ~ 1095438 (-)
arl6ip5b arl6ip5b,arl6ip5,LOC107684895,LOC107656678,LOC107736957,LOC107564791,LOC107555805,LOC102786473 coding downstream 313684 1077808 ~ 1081745 (-)
LOC122328511 LOC107690110,LOC107567958,LOC107724207,LOC107578799 coding upstream 80922 1482712 ~ 1494028 (-)
LOC122329158 NA coding upstream 152472 1554262 ~ 1557987 (-)
LOC122329159 LOC107678070,LOC107571224,LOC107705859,LOC107571225,LOC107678080,LOC107738794 coding upstream 204487 1606277 ~ 1608631 (-)
LOC122329161 LOC107678070,LOC107571224,LOC107705859 coding upstream 208479 1610269 ~ 1613006 (-)
LOC122329162 LOC107678070,LOC107571224,LOC107705859,LOC107571225,LOC107678080,LOC107738794 coding upstream 215797 1617587 ~ 1619011 (-)
G153984 LOC107727750,LOC107691341,LOC107566873 non-coding downstream 2294 1389362 ~ 1393135 (-)
G153967 NA non-coding downstream 187842 1206700 ~ 1207587 (-)
G153966 NA non-coding downstream 188827 1205479 ~ 1206602 (-)
LOC122328476 NA non-coding downstream 431852 960274 ~ 963577 (-)
G153893 cnbp non-coding downstream 495663 841719 ~ 899766 (-)
LOC122328606 NA non-coding upstream 18067 1419857 ~ 1420454 (-)
LOC122328609 NA non-coding upstream 191822 1593612 ~ 1594209 (-)
LOC122328398 LOC107678070 non-coding upstream 202822 1604612 ~ 1606221 (-)
LOC122328412 LOC107678070,LOC107571224,LOC107571225,LOC107678080,LOC107705859,LOC107738794 non-coding upstream 207370 1609160 ~ 1610175 (-)
LOC122328435 LOC107738794,LOC107571225,LOC107678080,LOC107678070 non-coding upstream 211418 1613208 ~ 1614708 (-)
l3mbtl1 l3mbtl1,LOC107736954,LOC107564793,LOC107684891,LOC107675169 other downstream 330655 1053377 ~ 1064774 (-)
vgll4a LOC107675174,LOC107736947,LOC107713758,LOC107684880,LOC107555803,LOC107574679 other downstream 513245 865477 ~ 882184 (-)
ndnl2 ndnl2,LOC107736943,LOC107568481,LOC107714263,LOC107660884 other downstream 609550 779085 ~ 785879 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other upstream 105908 1507698 ~ 1512329 (-)
LOC122328833 LOC107669693 other upstream 700920 2102710 ~ 2116883 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other upstream 1367692 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other upstream 1385506 2787296 ~ 2798533 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other upstream 1467828 2869618 ~ 2874758 (-)

Expression


Co-expression Network