LOC122329158


Basic Information

Item Value
gene id LOC122329158
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 1554262 ~ 1557987 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225359.1
ATGAGCTCCAGAGTTTGTCGAGAGCAAACACCAGCGACCCATCAGGAGCGAATCAGCGGGATTCTCCTGCAGCGGCCCCGCTATGAGGAGCGCCCGACAGaaatccaaacaaaaaacaagaagcGCGGCATCCGTGCTTTCTTCAAGAGAACCTGGCAGGCTGTAAAGTGCGCTGACCGCTGTCGCCACAGAGGGAACAAAGTGGTGCCTCTTCAGCCAGAGACAGATCCAGATGATCTCCTGATTCCCCCGGAGTCGACGGCTCCCAGAGATCCAGATCTCCTGATCCACAGCCAGGCTCAGTCCAGCACTGAGTCACCAGCTCATCCTGATGCTGACTTGGCAAGTCAGAGTCCAATTCCAGGTGATGCACAGAGAACCTGGCAGGCTGTAAAGTGCGCTGACCGCTGTCGCCACAGAGGAAACAATGTGGTGCCTTTTCAGCCAGAGACAGATCCAGATGATCTTCTGAGCCCCCCGGAGTCAATGGCTCCCAGAGATCCAGATGATCCACAGCCAGGCTCGTCCAGCACTGAGGCAGCAGCTCACCCTGATGCTGACCGGACCGGTCCAAATCCAGTTCCTGGTGCATCTGGTCTCAAGATGACCTCTGACAGAGACCCAGCTGAAAGTCCATTTCTCTCCCTTTATGAAGTGGGAAACAAGATTTCAGCAGGAATGTTCGGCAGCGTATTTCAGGGGATTCGTAAATCTGACAGAAAACagGTCGCCATCAAATTCATTCAGAAGAGGAAGATCGAcaagtatatacattttGCTGGGTATTCCAAGCCACTGCTGATGGAAGTGGCTCTAAACCTCCTGTTGAAAAAAGCTCCGCTGAGCCCCAACATAGTATACATGCTGGAATggtttgaagaggaggatcAGCACATCCTGATCTTGGAGCATCCGCGACCCTGCCTGACCTTGCTTGGACTGCGGCTTGACTGCAAGCACAGGACGCTAGATGAAACGCAGGCACGCGGCTTGATGTTCCAAGCGGTGCTCGCAGCAAAGCACTGCATTGATCAAGGTGTCTTCCACCGTGACATCAAGCCAAGTAATGTCCTGGTTAATACGGAGACGATGGAAGTCAAATTAATAGACTTCGGCTCCGGTGACCTCGTCAAACAATCTGGCTATCAGTATGAATTCAGAGGAAGACATCGGCCACCAGAGTTCTACACGAAACGCAGATATCACGCGGGCCCGACAACAGTCTGGACTCTGGGCATCATGCTCTACCAATTAGTAACTGGACGTCAAGCTTTTCGAACCGAAGAGGAGATTATAGCCGGCGATCTGGCGTTTGACTCCAGTTTATCCAAAGAATGCCAGGAAGTGATAAGCCAGTGCCTGATACGTGATCCAGACGACAGAGCGACGTTAGAGCAGCTCTTAGATCACAAATGGTTTCAACAGGAAGATGATCCAGCGGTAGATCAGGGGTCAGGTGGAGTAACGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225359.1 True 1470 mRNA 0.52 8 1554262 1557987

Neighbor

gene id symbol gene type direction distance location
LOC122328511 LOC107690110,LOC107567958,LOC107724207,LOC107578799 coding downstream 60234 1482712 ~ 1494028 (-)
LOC122329157 NA coding downstream 152472 1395429 ~ 1401790 (-)
LOC122328434 NA coding downstream 182788 1362002 ~ 1371474 (-)
LOC122329156 nup210,LOC107675171,LOC107684885,LOC107555788,LOC107564796,LOC107736952 coding downstream 209696 1282121 ~ 1344566 (-)
b4galt5 b4galt5,LOC107736963,LOC107684873,LOC107656676,LOC107566184,LOC107725076 coding downstream 369596 1165023 ~ 1184666 (-)
LOC122329159 LOC107678070,LOC107571224,LOC107705859,LOC107571225,LOC107678080,LOC107738794 coding upstream 48290 1606277 ~ 1608631 (-)
LOC122329161 LOC107678070,LOC107571224,LOC107705859 coding upstream 52282 1610269 ~ 1613006 (-)
LOC122329162 LOC107678070,LOC107571224,LOC107705859,LOC107571225,LOC107678080,LOC107738794 coding upstream 59600 1617587 ~ 1619011 (-)
spata2 spata2,LOC107703616,LOC107562628,LOC107713568,LOC107680738 coding upstream 88000 1645987 ~ 1651285 (-)
dhx35 dhx35,zgc:158828,LOC102790768 coding upstream 365200 1923187 ~ 1934838 (-)
LOC122328606 NA non-coding downstream 133808 1419857 ~ 1420454 (-)
G153984 LOC107727750,LOC107691341,LOC107566873 non-coding downstream 161127 1389362 ~ 1393135 (-)
G153967 NA non-coding downstream 346675 1206700 ~ 1207587 (-)
G153966 NA non-coding downstream 347660 1205479 ~ 1206602 (-)
LOC122328476 NA non-coding downstream 590685 960274 ~ 963577 (-)
LOC122328609 NA non-coding upstream 35625 1593612 ~ 1594209 (-)
LOC122328398 LOC107678070 non-coding upstream 46625 1604612 ~ 1606221 (-)
LOC122328412 LOC107678070,LOC107571224,LOC107571225,LOC107678080,LOC107705859,LOC107738794 non-coding upstream 51173 1609160 ~ 1610175 (-)
LOC122328435 LOC107738794,LOC107571225,LOC107678080,LOC107678070 non-coding upstream 55221 1613208 ~ 1614708 (-)
LOC122328558 LOC107738794 non-coding upstream 58499 1616486 ~ 1617477 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other downstream 41933 1507698 ~ 1512329 (-)
l3mbtl1 l3mbtl1,LOC107736954,LOC107564793,LOC107684891,LOC107675169 other downstream 489488 1053377 ~ 1064774 (-)
vgll4a LOC107675174,LOC107736947,LOC107713758,LOC107684880,LOC107555803,LOC107574679 other downstream 672078 865477 ~ 882184 (-)
ndnl2 ndnl2,LOC107736943,LOC107568481,LOC107714263,LOC107660884 other downstream 768383 779085 ~ 785879 (-)
LOC122328833 LOC107669693 other upstream 544723 2102710 ~ 2116883 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other upstream 1211495 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other upstream 1229309 2787296 ~ 2798533 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other upstream 1311631 2869618 ~ 2874758 (-)
G154446 NA other upstream 1367061 2925048 ~ 2957272 (-)

Expression


Co-expression Network