LOC122329174


Basic Information

Item Value
gene id LOC122329174
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 3288123 ~ 3298955 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225372.1
ATGGCTCTACAAGATCTGACAGATCCACCAGAAGATCATCTGTCTTGTTCGTctgatcctggtcaagaaccGCCTGGTTTTGTACCAACATGTCTGCAGAATTCAGCTGATCATCAGTCGGATCCATCTGTCCATGAAACCATGGCTCTACAAGATCTGACTGATCCTACAGAAGATCGTCTGTCTGGTTTGCctgatcctggtcaagaaccGCCTGGTTTTGTACCAACGTGTCTGcaggattcagctgatcttcttcCAGGCCCGTCAGCTCTTGAGCCAGTACTCCCAAAATTTCCAGCTGCTTGCAAGCATAGACGAATCAAGGATCAAACCCGAGCAGCCTGTTTCAGCCGTCCAACTCCAGtaccatttgatgagatttatgaagTGGGAGATGAGCTTGGACAAGGAGGCTTTGGCACTGTGTACGAGGGGACTTCAAAAAATCAACGCAAGAAGgttGCTATCAAAATCATCCACAAGTGTGAAAGAGACCGTTATATTGAACTACCTGGCTGTTCAAAGCcactgtttgcagaagtggctgcAAATCTGCTGCTGAAACAGGCTCCATTAAGCCCCTACATTGTGTACATGCTGGAATggtttgaagaggaggatcggttcatcctcatcctggaaCATCCGGAACCCTGCAAGGACTTGCTCAAATTTGTGGTTAACAACATGCATTGGGCTAACGAATTACAGACACGTAGCCTGATGTATCAAGCGGTGCTCGGGGCCAAGCACTGTCTTGACCGAGGTGTCTTTCACCGGGACATTAAGTTGAATAACTTTCTGATCAACACGACGACTAACCGAGTCcaactaatagactttggctgcagTGACCTCGTCAAAAGTACAGGCTACTTGGGTGGTTTTATAGGAGGAGTCTGCCCGCCTGAATACTACAACGACTTAAGATACAAGGCAGAGCCAACAACCGTCTGGTCTCTGGGTGTAATGATGTACACAATGATGTGCAAATGTCGACCCTTTAGAagtcctgaagacatgatgcatggcagtctgagttttaacgttagagtatccacagaattgcagaacttgataagtcgctgcctgactgttgacccaactaagagagcgactattgaggagatcctacagcataaatggtttTTTCAACAAAGCTCAACTTACGCATGGAGCCAATTTGATCCTAAAGACTTTGCAGGAGTTGATGttgatgctgatatttttgatgagcttgtgagaaCATCTAAGGTGTCCTTCAGACTTTTAGACGGTGATAAAGCCGGTAAGAAGCTGGTAAACATCCTTGTGGCTGATATGGTAGAGAAGTATGGTGTACCTGATGAAATTGATGTGACTGATGCAGACCCAAGGAAGGATGAAGTGCAAGATGCTTACACAGAGAATTTAGCTCTGTTTTACTTGGCTTTGGAGGCAAAGCATTTAGTCCCAGTCTCCACAATCACAGAGAtggcaaatgaaatgaagactCTTCAAGTTAGTAACTGa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225372.1 True 1515 mRNA 0.45 10 3288123 3298955

Neighbor

gene id symbol gene type direction distance location
hdac7a LOC107704627,LOC107709222,LOC107752451 coding downstream 81712 3142283 ~ 3206411 (-)
LOC122328862 LOC107709224,LOC107558908,LOC107704618,LOC107696950 coding downstream 159901 3120862 ~ 3128222 (-)
LOC122328875 LOC107709230,LOC107558910,LOC107696973,LOC107704617,LOC107554205,LOC107748447 coding downstream 167380 3114692 ~ 3120743 (-)
tmem106c tmem106c,LOC107697039,LOC107704621,LOC107558924 coding downstream 174694 3107007 ~ 3113429 (-)
LOC122328874 LOC107704620,LOC107748451 coding downstream 181183 3102068 ~ 3106940 (-)
LOC122328834 anks1a coding upstream 54006 3352961 ~ 3430053 (-)
uhrf1bp1 uhrf1bp1,LOC107697035,LOC107672988,LOC107566066,LOC107554204 coding upstream 148604 3447559 ~ 3473454 (-)
ngfa ngfa,LOC107709229,LOC107554210,LOC107673522,LOC107566067,LOC107696968,LOC107735269 coding upstream 230578 3529533 ~ 3554513 (-)
pnpla1 LOC107696946,LOC107559157,LOC107746525 coding upstream 375510 3674465 ~ 3681959 (-)
etv7 LOC107559164,LOC107696965,LOC107746509,LOC107673543,LOC107707376,LOC107598153 coding upstream 383137 3682092 ~ 3688198 (-)
G154525 NA non-coding downstream 274942 3011419 ~ 3013181 (-)
G154519 NA non-coding downstream 278645 3006483 ~ 3009478 (-)
G154520 LOC107709225,LOC107565972 non-coding downstream 290159 2996765 ~ 2997964 (-)
G154443 NA non-coding downstream 337465 2925204 ~ 2950658 (-)
G154444 NA non-coding downstream 355886 2925010 ~ 2932237 (-)
G154663 NA non-coding upstream 333404 3632359 ~ 3633333 (-)
G154671 NA non-coding upstream 356331 3655286 ~ 3655596 (-)
G154672 NA non-coding upstream 357333 3656288 ~ 3656543 (-)
G154684 LOC107746508,LOC107696966,LOC107559163 non-coding upstream 373724 3672679 ~ 3673581 (-)
G154687 LOC107559166,LOC107559158,LOC107746523,LOC107696944,LOC107696945 non-coding upstream 393982 3692937 ~ 3693265 (-)
G154446 NA other downstream 330851 2925048 ~ 2957272 (-)
G154445 NA other downstream 336495 2925305 ~ 2951628 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other downstream 413365 2869618 ~ 2874758 (-)
LOC122328838 LOC107680059,LOC107748448,LOC107565963 other downstream 449076 2769482 ~ 2839047 (-)
LOC122328849 LOC107718007,LOC107687303,LOC107571802,LOC107748430,LOC107680054,LOC107565975 other downstream 489590 2787296 ~ 2798533 (-)
LOC122328836 LOC107566068 other upstream 135169 3434124 ~ 3445964 (-)
tspan2b tspan2b,LOC107709234,LOC107696969,LOC107746340,LOC107566064,LOC107673514,LOC107554202 other upstream 203310 3502265 ~ 3518142 (-)
lad1 LOC107746516,LOC107696941,LOC107559160 other upstream 596011 3894966 ~ 3905892 (-)
LOC122329268 LOC107707377,LOC107673205,LOC107746501,LOC107697018,LOC107601321,LOC107598138,LOC108443130,LOC103026736,LOC106572423 other upstream 874959 4173914 ~ 4194998 (-)
LOC122329181 LOC107601337,LOC107697001,LOC107723119 other upstream 1528523 4827478 ~ 4834520 (-)

Expression


Co-expression Network