LOC122329206 (tas1r1,LOC107593439,LOC107712676,LOC107687455)


Basic Information

Item Value
gene id LOC122329206
gene name tas1r1,LOC107593439,LOC107712676,LOC107687455
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 12510231 ~ 12515171 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225406.1
ATGGGTAAGACGCTGGCCTGgtttgtctttctctgtctcttgaGCTACAGTGACAGTGGAGGGCTCCACCTTCAAGGAGATTATATAATCTCTGGCTGGTTCCCTCTCCATAATTCAGATTCCACCATCCCACCGACACCTTACCTGACTGACTGCACACAAGGCTCGACCAATAAACATGGCTATCATCTGGTGCAGGCCTTCAGATACGCCGTGGATGAAATTAACAACGGCACCCGGAATAAGGACCTCCTTCCAGGGGTTACGCTGGGCTACCGGACGTATGACCTGTGCTCCCTCCCGGCCAGCAATCTGGCCACCCTGGATCTGCTGGTGCAGCAGGACGACAGTTCACTTGTGGACAGCCGTTCTGTGGCCATCATCGGTCCTGACAGCAGTTCCTACTCTTTCACACCAGCCGCTGCTCTTGGTGCATTCCTGGTCCCTCAGaTCTCTTACGAGGCATCAAATGAACTGCTGAGCAACAAGATCCTCTATCCAGCTTTCTTCCGCACCATTCCCAGTGACAAAAACCAAGTCAGCGCAATGATACAAATCCTCGTCAGATTTAACTGGACCTGGATCGCCCTTCTCGGTAGTGACAATTCATACGGTATACAGGGAATGCAAGGCCTATCCCAGCAAGCGCCGCTTTATAATTTATGTATCGCATACCAAGCCTTGATACCGGCTGTAACCGACGAGACGAAGCAATACATGCAAGACATGGTCAAAAACATTCTCAAAACCAAAGTCAACACTATAGTTGTCTTCGCCAATAAGAGGCGGGCCGCTGGCTTCTTTCCTTTCGTTATTGACCAAAACGTGACTGGAAAAGTATGGATTGGGACGGAGGACTGGTCGGTGGCGTCAACAGTGAGTAGTATCCCAGGGATCAGTACCATAGGGACTGTCCTCGGTGTCGCAGTCCAGTATACTGAATTTAGTGGTTTCGAAGACTTTGAAAGGCTTTCTGTGCCCGGTCTCAAAGACCTCAACAGTCCGTTCAGCCACAGCGTCTCATGTatgcaaaatacaaaactttACGAAATAGCGATTCAGGGCTTTTCTTTGTCGCAATATGATGTTGTTTCGTCCTTTAACGTGTATAAGGCTGTGTACGCCGTAGCTCATGCACTGCACAACATCCTGCACTGTGACTCTGGACTGTGTCAGAAATATAACGTGCAGCCATGGGAGGTATTTCATCAGCTAAAACAAGTTCAGTTTTCTATTCGAAATacgtcattttattttgatgaaaacgGAGACCCTCCTACAGGTTATGATATAGTGACGTGGGTATGGACGGACGGCCAGTGGTCATTCAAGGTGGTGGGAAATTACACTCCAGGTCCCACTCAGCTTCAGTTAGATGACTCTCTGATTAAATGGACAGGTCAAGGGTCTCTTGTAACCAAGGTTCCCGAGTCACTGTGTTCTCCAGAGTGTCCTTATGGATACAGAAAGCTCATGACGGGACAGCATAAGTGTTGCTTTGACTGCATGGCATGCCCTGCCGCCACCTTCCTTAACAAAACAGGTTACACGTTCTGCCAAGCGTGTGCCAGAGACTACTGGTCCGAAGCAGAGAGTGAGACATGTGAGGAGCGAGCAGAGCTGTACCTGCCGTGGGGCGCTCCGCTCACTACGGCCCTGCTCATATACCTGGGGGTGACCCTGTTTCTCACCCTCGGCACTGCTGTCATCTTCCTGTTCAACCTCAGCACCCCTGTGGTGAAGTCGGCCGGAGGGAAGACCTGTCTGCTGATGTTGGCGTCTCTGACCGTAGCTTCCTGCAGCACGCTGTGTCACTTCAGCAGACCCTCTCACATCGGCTGCCTCCTCAAACAGCCCCTCTTCATGATCAGCTTCACCGTCTGCCTGGCGTGTGTGACTGTGCGCTCGTTTCAGGtggtttgtatatttaaatggtCCTCCAAACTGCCAAGATCCTATGAGACCTGGGCCAAGAATCGAGGCCCTGAGATGTTCATCTTCATTACGACAGTGGTGGAGGTCTTTATCTCTCTTCTTCGGATGATCCTCGACCCTCCCTTTCCGTCTCGGGACTATGACTTCTACAGAGACAGCATTATTCTGGAGTGCAGTAAGACCCTGTCTCTCGGGGCCTTCGCCGAGCTCctttttgtgtgcgtgttgaGCTTAATTTGCTTCTGCCTGAGCTACATGGGAAAAGATCTGCCGGCCAATTACAATGAGGccaaatgcattacatttagtcTCATGATATATATGATTTCTTGGATCACGTTCTTCACAGCTTACTGCATTTCCAGAGGGAGCTTCGCCATGGCCCTAAACGTAGGCGCCATCCTGTTTAGTGTGCTAGGGATCCTCGGCGGCTACTTTTTGCCAAAGGTGTACATAATGTTGATAAAGCCCCAGTTGAATACAACAGCCCACTTCCAAAACTGCATTCAAATGTACACCATGTCCAAGCAGTGAAAGCAAATAAGTCTTTCTACTATGTCTCTCAACAGTAGGATAATCCAGTAGAGCCTGTTAACAATACAGAGCAA

Function

symbol description
tas1r1 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in gill raker; mouth; and pharynx. Orthologous to human TAS1R1 (taste 1 receptor member 1).

NR:

description
PREDICTED: taste receptor type 1 member 1-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04624 TAS1R1; taste receptor type 1 member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225406.1 True 2543 mRNA 0.49 7 12510231 12515171

Neighbor

gene id symbol gene type direction distance location
iffo2a LOC107737575,LOC107712691,LOC107703080,LOC107591153,LOC107593384,LOC107687398 coding upstream 1229 12491866 ~ 12509002 (+)
ubr4 ubr4,LOC107687395 coding upstream 19377 12450270 ~ 12490854 (+)
emc1 emc1,LOC107593385,LOC107591116 coding upstream 60699 12441056 ~ 12449532 (+)
kcnab2b kcnab2b,LOC107687393,LOC105894315,LOC107712982,LOC107672035,LOC107737578,LOC108434650,LOC108276490 coding upstream 126120 12332606 ~ 12384111 (+)
pax7b pax7b,LOC107672046,LOC107593389,LOC107687391,LOC107565832 coding upstream 198977 12252725 ~ 12311254 (+)
LOC122328350 LOC107712654,LOC107737705,LOC107703076,LOC107712673,LOC107593382,LOC107593415,LOC107687469 coding downstream 9300 12524471 ~ 12525910 (+)
draxinb LOC107703074,LOC107591150,LOC107737703,LOC107712672,LOC107593437,LOC107687472 coding downstream 21527 12536698 ~ 12541914 (+)
icmt icmt,LOC107703075,LOC107591113,LOC107593379,LOC107687399 coding downstream 27140 12542311 ~ 12545517 (+)
LOC122329204 rpl22,LOC102779685 coding downstream 39026 12554197 ~ 12555217 (+)
arhgef10lb arhgef10lb,LOC107703072,LOC107591110,LOC107712685,LOC107687400,LOC107737571 coding downstream 48196 12563367 ~ 12600467 (+)
G157084 NA non-coding upstream 123850 12353090 ~ 12386381 (+)
G157081 NA non-coding upstream 264130 12245874 ~ 12246101 (+)
G157079 NA non-coding upstream 268830 12239849 ~ 12241401 (+)
G156931 NA non-coding upstream 304836 12204256 ~ 12205395 (+)
G156933 NA non-coding upstream 335316 12174530 ~ 12174915 (+)
G157265 NA non-coding downstream 213873 12729044 ~ 12787715 (+)
G157294 NA non-coding downstream 338070 12853241 ~ 12853832 (+)
G157317 NA non-coding downstream 474630 12989801 ~ 13040412 (+)
G157326 NA non-coding downstream 591289 13106460 ~ 13106957 (+)
G157329 NA non-coding downstream 599787 13114958 ~ 13115174 (+)
LOC122328708 LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419 other upstream 258249 12246193 ~ 12251982 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other upstream 763661 11697414 ~ 11746570 (+)
LOC122328549 smim4,LOC107560937,LOC107671967,LOC107737614,LOC107712735,LOC107699582,LOC107570283 other upstream 777870 11730980 ~ 11732361 (+)
G156586 NA other upstream 1333198 11174421 ~ 11177033 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other upstream 1424627 11077154 ~ 11085604 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other downstream 1578907 14094078 ~ 14126201 (+)
si:dkey-151g10.3 LOC107737519,LOC107716153,LOC107593909,LOC107668334,LOC107673054 other downstream 1784530 14299701 ~ 14343274 (+)
pkig pkig,LOC107737509,LOC107673080,LOC107574720,LOC107564651 other downstream 2088622 14603793 ~ 14636817 (+)
itih6 LOC107737505,LOC107673092,LOC107574689,LOC107695841,LOC107716181,LOC107564649 other downstream 2094358 14609529 ~ 15153978 (+)
LOC122328906 LOC107673074,LOC107737500,LOC107695835,LOC107716175,LOC107574686,LOC107564653,LOC107576192 other downstream 2165689 14680860 ~ 14686618 (+)

Expression


Co-expression Network