LOC122329207 (hck,LOC107681869,LOC107707747,LOC107690859,LOC107747493)


Basic Information

Item Value
gene id LOC122329207
gene name hck,LOC107681869,LOC107707747,LOC107690859,LOC107747493
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 7932443 ~ 7954995 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225407.1
GTAACTCTTTCTTACCTTTCCTCTCTATTTCGATCTCATTCTCATTAGTTTTCAATCTGATGTGGCTCTCCGGGGGGCTCCGGATGACACCGGCGTGACGAGGAGGCCGACAGCATCGCGTGATTGGCAGGTGACGTGATTGACGTCCACAAGGTGGCACGGGGAAGACGGGTGAAGAGGCAGGTGTGCAGGAACACCAGCATGGCTGTAGAAAGCTTTCCTGAACTCCTTCAGAAACTGCGGGAAGTCCATGAACATGAGTTAGAGGGATGGCAAGAGAAAGTACTGGAGctgacaaataaaaagaatatgtGAGTGTGAATCCTATATTTTTCAAGCTAAAATTGACTGACACGATATGAGATCGACCTCAATAATGTTTTACGTGCGTTTTCTGGTAGTGATGCGAAGCGCATAGAAGAGCTTTACAACAGGAACCAGCAGATGAAAGAACAGCAGCGGATTCTTACTGAGAACATCAAACAGCTGGagaacagGTTGCGGGCCGGGTTGTGTGACAGGTGTACAGTCACTCAGGATATGgctaaaaaaagacaactgaAGTATGAATCCTCCCAGCTCCAGAGTCTGCAGCACATCTCTCTACTGGTGAGTGAGATGAATGcactaaagaaagaaaacgaCAGCCTGAGAGAGGAGCTGAAGGGCTTGAGGCATCCATCAAATCGGCAGAATGGTCATTCAGAGGATGCTATCACCCCAGAGGTCAAGGTATCACCTGACACAGCAGTAGCTGCCGTGACTTTACTGGCCTCAGGACTGAAGTCCAGCCAGCCTCCAGCAGGGGACGCCACGGTACCTGCAGCCACTGTCAAGCGTGAGATGGACAACAGCCCGACCGACAGCCTGGAAAAGGCTACTGAACACAAACTTATGCAAAGCTGGGGCAGGGCGTTTTCATTTGAGTCGAATAAACCCATGCTGCCCACCTCAAGATGGGGCACAGACCACAGTGCTGAAAGAAGATCTTCCAGCGTGGACTCGGTCGAGCACAGACATTCCCCTTTGTCTCCTTCTCTTCCATCTCCTCTTAGTCTACTGAAGAGCAATCctattttttcttctgttgcCTCTGAGGAGCGTAGCAGCCGGCAACAAATCCACGCCCCCGTCCCCTTCCGGCCACTTCCAATCAAGACCACTCGCTTGTCTATCCCGTGGACGCTCTCAGAATCTACCGACTGGGTAACGGTAGCAGCGGGCGGCTCTGGCGCCGGTAGTGGGATAACAGTGCACCCAAGCCAGACTCCAATTCCCAGCTCAAACATACTGCGCTTCCCTAAACTGGTCCCACCAAGCAGCAGCCACCAGTCTCGCACACATGGCCCGACACCTAGCGCTCTGCGGCCCTGGTCCCGCAGGAACCTGTCAGAGCATGCGGAGAGTAGAGAAAAGAGAGCGACGGAAGCCGTTGCAGCGCCGCCCCAGTGGAAGGTCACGGCAACGCAGCCGGAAAGGATTTTTGGAGAGAATCtgagagaggaggaagaggaagcaCCGTTAGACCTGTCTGAGTCTGGACGttcaaaaaacaaagagaaagagaagataCACTCACAGAGCGAcgcatcttcatcttcatcttcctcaCCACCTGCAACGCTTTCCTCTTCATCTCAATGCCCATCAAGCCCTCTAAGCGACCAGCAGACAGCAGACAACAATACACAGCAGGAGGAAGCGCAGGAAACGTGTGAGGAACAGGAAGAGGTAAAGGAAGATGAAACATCTCCAGCAGCTGAAACGTCTGTCGgctcagagaagaagaaaatccCACCGCTAACCATTTCCCTGCAACCAGTTGTGGTAATGGAGACGCTTAAATCAGGAGTACAGTTTCCCGATCATGGAAGCAGACCAATGGAGCACGAGGAGAAAGAGAACAATAACCTTGAAGCAAGCAGAAAAAGATTTGGGCAGGATACTGATGCTTTTTCCCAGCGCTCGCTAAATGAGAAGAAAATTCGGCTGAGCAGGGGACCTCAAGGAAGCCATGCAGACTCAGAGCAAGGATGCCTCAACATGGGCTGTGTGGGGACCAAACCGGAGCAGGATCCTATTGGCAAATCGATGGGGAGCGATGACAACCGCAACCAGACGGCACATTACACCAAAGACCCAACGGCGGGCTCCAAAGCTAACAGAATGGCCTCTAACCCAGCTTCTGGATCGGATGCTTCAGAGAACATTGCCATAGCTCTGTATGACTACGAAGCTATGCACGAAGGTGACCTGGGCTTCAAGAAAGGAGACAGAATCAGAATCCTTCAGGAGTCAGGCGAATGGTGGAAAGCAGCATCCATCAGCACTGGTCAGGAAGGCTTCATCCCCAGTAACTATGTTGCCAAGGATACTCTGGAAACTGAAGATTGGTTTTTTAAAGGTGTCAGCAGAAAGGATGCAGAGAGACAGCTGCTGGCATCTGGAAACAAAATAGGATCTTACATGATCAGAGACAGTGAAACCACCAAGGGAAGCTACTCTCTGTCTGTCAGAGACTGCGACCAAACAGGAGACACGGTGAAGCATTATAAGATCCGCACGCTCGATAATGGCGGTTTCTATATTTCTCCACGTATCACCTTCAACACTCTGCAGGATCTGGTCAGCCACTACAAGAAGCAGAGCGATGGGTTGTGCCAGTCTCTCACTGTCGCCTGTCTGAGTCCCAAACCTCAGAAACCTTGGGAGAAAGATGCCTGGGAGATCCCACGCGAGTCCCTCAAACTGGATAAACGTCTGGGAGCAGGCCAGTTTGGAGAGGTCTGGATGGCAACATACAACAAGCACACAAAAGTGGCAGTGAAGACAATGAAGCCTGGCAGCATGTCTGTGGAAGCTTTCCTCATGGAGGCCAACTTGATGAAATCCCTCCAGCACGACAAACTGGTCCGTCTCAACGCTGTGGTCACCAAAGAAGAGCCCATATACATCATTACAGAGTTCATGGAGAAAGGCAGCTTACTGGACTTCATCAAGAGCGATGAAGGGAATCGTGTCCAGTTGCCCAAACTGATTGACTTCTCAGCACAGATAGCAGAAGGCATGGCTTACATCGAGCAGAGAAACTACATTCACAGAGACCTTCGCGCTGCCAACATCCTGGTCAACAAGAGTTTAGTGTGTAAGATCGCTGATTTCGGACTGGCCCGTATCATAGAGGACAACGAATACACCGCCAGAGAAGGTGCAAAGTTCCCCATAAAATGGACCGCTCCAGAGGCCATAAACTATGGTTCCTTCACCATTAAATCAGACGTGTGGTCCTTCGGCATTCTGCTCACTGAAATCATTAGCTACGGCCGCACACCGTATCCAGGTATGACAAATCCAGAGGTGATCCGTGCTCTGGAGAGAGGTTACCGTATGCAGCGTCTGGACTCCTGTCCTCAAGAGCTCTACGACATCATGCTGGAGTGCTGGAAGAACAAGCCTGAGGACAGACCCACCTTTGAGTACCTGCAAAGCGTGCTGGAGGACTTTTACACTGCCACAGAGAGCCAGTATCAGCAACAGccttgagacacacacacacacacaccttgacACGACCTTGATCTTGCATAAACCCCATTTATCAGGAAGAAATGTACACATATGTAACTTATCCATGCCGACCTGTTGACTTTATACATATGTAgtgaaattaaatgtgaaaagttATAGTGTGTTATTTAATGATatgtaaatgaatgcaatttcaaAATCTTAGCAATAGCAGTTTCATTCCTATCAGCCTTTTGCCTTACAATGAGTGTTGCACAACACAAGCTATATGAAGTTAGGACTTTAATATGAAACgtgagaaattatattttttttccatgttatAACTTTTctgatttacttttaaaatccTGATGGCGGATGTCTTTTAGAGCTaatcatatgtgtgtgtgtgtgtattgtatatatataaaagaaattgTAGCTATGATTGCTTAAGAAAAGATAATTTTAAACCTTCAACCTACATTAGGTTTTAAGTTATTGTGgattagaaaatgtatatacacttgctcacaaaaaaaaaggtaaagatTTTATTGAAATCATTGCtccaaacatttcagaaaaaaagcatctgtACCTATAAGGTAGTTATGAATACTTCTTTGAGTCACtgtgtattatattatgaaGTTGTAAGTTCAGGCTTCATTTCTCCAGATTTTCAGGTCATTTGAAATGTATCTTACTTGTATATCTTCTGTTctgtatatttgtttgaaattttGTGCAATAATAGTAAACCGTGTAAGTGACATTCTATTTTCCTTTAAAGGACCTTAGCTGTGGCTTCTTTAAAAATTTATCCAGCTGTTTTTCAGCACACTTTTCCATGATGTAAAATCGATGTAAAAGAGTTGCCTATGAATaaatgtatgcgtgtatgtatgtggtTACAATTAGtccataaaacaaataaattaatttccattttaa

Function

symbol description
hck Predicted to enable non-membrane spanning protein tyrosine kinase activity and signaling receptor binding activity. Predicted to be involved in cell differentiation; innate immune response; and transmembrane receptor protein tyrosine kinase signaling pathway. Predicted to act upstream of or within protein phosphorylation. Predicted to be extrinsic component of cytoplasmic side of plasma membrane. Orthologous to human HCK (HCK proto-oncogene, Src family tyrosine kinase).

NR:

description
PREDICTED: tyrosine-protein kinase HCK-like

GO:

id name namespace
GO:0018108 peptidyl-tyrosine phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004713 protein tyrosine kinase activity molecular_function

KEGG:

id description
K08893 HCK; hemopoietic cell kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225407.1 True 4467 mRNA 0.47 25 7932443 7954995

Neighbor

gene id symbol gene type direction distance location
tm9sf4 tm9sf4,LOC107681873,LOC107690854 coding downstream 339 7922253 ~ 7932104 (-)
LOC122328942 pofut1,LOC107707748,LOC107681402,LOC107558235,LOC107747492,LOC107690856 coding downstream 66056 7862203 ~ 7866387 (-)
LOC122328943 kif3b,LOC107690851,LOC107558233,LOC107559485,LOC107681362 coding downstream 71089 7854304 ~ 7861354 (-)
LOC122328712 kif3b,LOC107593268,LOC107721442,LOC107690993,LOC107697206,LOC107719402,LOC107690851,LOC107559485 coding downstream 99859 7822122 ~ 7832584 (-)
LOC122328356 pofut1,LOC107707748,LOC107681402,LOC107558235,LOC107747492,LOC107690856 coding downstream 144156 7784305 ~ 7788287 (-)
gata5 gata5,LOC107681871,LOC107707745,LOC107747495,LOC107559469,LOC107690861 coding upstream 23896 7978891 ~ 7985474 (-)
trnai-uau_5 NA coding upstream 230902 8185897 ~ 8185988 (-)
trnai-uau_6 NA coding upstream 231200 8186195 ~ 8186288 (-)
trnai-uau_7 NA coding upstream 231822 8186817 ~ 8186910 (-)
trnai-uau_8 NA coding upstream 232122 8187117 ~ 8187210 (-)
G155669 LOC107747485,LOC107707759,LOC107559486,LOC107690852,LOC107558232,LOC100536777,LOC107681385,LOC108440950 non-coding downstream 80192 7819746 ~ 7852251 (-)
G155684 NA non-coding downstream 95905 7834562 ~ 7836538 (-)
G155670 LOC102294427,LOC107690852,LOC107681385,LOC108440950,LOC107559486,LOC100536777,LOC107747485 non-coding downstream 115072 7766248 ~ 7817371 (-)
G155629 NA non-coding downstream 448238 7483923 ~ 7484205 (-)
G155628 NA non-coding downstream 449951 7482027 ~ 7482492 (-)
G155698 NA non-coding upstream 18108 7973103 ~ 7973325 (-)
G155737 NA non-coding upstream 221704 8176699 ~ 8177518 (-)
G155759 NA non-coding upstream 352284 8307279 ~ 8382607 (-)
G155803 NA non-coding upstream 571407 8526402 ~ 8532927 (-)
G155825 NA non-coding upstream 669931 8624926 ~ 8625642 (-)
G155596 sox18,LOC107727030,LOC107681403,LOC107551552,LOC107666636,LOC107705673,LOC107571663 other downstream 654120 7276448 ~ 7278323 (-)
LOC122329304 ccm2l,LOC107666505,LOC107551511 other downstream 928920 6994167 ~ 7003523 (-)
LOC122328436 cables2b,LOC107681405,LOC107705686,LOC107551510,LOC107559848,LOC107726996,LOC107666605 other downstream 950482 6964742 ~ 6981961 (-)
ccm2l ccm2l,LOC107666505,LOC107551511 other downstream 1065143 6858007 ~ 6867300 (-)
rps21 rps21,LOC107666483,LOC107681394,LOC106572905 other downstream 1109411 6766608 ~ 6823032 (-)
G155807 NA other upstream 590399 8545394 ~ 8551977 (-)
G155827 NA other upstream 670763 8625758 ~ 8628391 (-)
c23h1orf127 LOC107708840,LOC107570680 other upstream 958067 8913062 ~ 8919770 (-)
sst6 LOC107681964,LOC107571825,LOC107695779,LOC107570713,LOC107681961 other upstream 966569 8921564 ~ 8926751 (-)
ctnnbip1 ctnnbip1 other upstream 1124537 9079532 ~ 9097302 (-)

Expression


Co-expression Network