plagl2 (plagl2,LOC107690855,LOC107559482,LOC107707758,LOC107681868,LOC107747490,LOC107558237)


Basic Information

Item Value
gene id plagl2
gene name plagl2,LOC107690855,LOC107559482,LOC107707758,LOC107681868,LOC107747490,LOC107558237
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 7884296 ~ 7920041 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225458.1
GGCCTGACGTCACACTCCCACAATGCTCGCGCGCCCCATAACTCTGCCGCTGCAGCCTGAGGAGCGCGAGACACTCAGGCCccgaaaaaagaaaaattagagaaaaaaattggaaaaaataataaaacaacagatcGAGAGGAGAAAGAGCGGGGAACGGCGGCGCGGGGCTCCCACGGGTGAAGATAATGATGAGCAGTATTGTCACCCACTCGGCCCCAGTCATGGCAGGTGGGACTGGATGAGAGCGTGAAGATAGCAGACAATTTTGGAGCCTGCATCCCCTTGAACGTCGTCGCAATATCGAACTAGAGCCTGGAAAGCAAGGCAGCCACGGCCGAGTTTCAATGGCAACGGCACCCTAGGGCTGCCATGGCAGCAGCTGCCGCCGATGCCTCACATCATATTGCCACACTGACGCTGGAGGACGAGGAACGACGAGGCGCCACCAAAGTGTTTGGAGGTCCCGCTGCAGGGAGGAcggaaagagagatagagaacgagaaagagagggagagggaagGGAGAGGCAGTGGGAACAAGTGTTTGGTGTGCGGTGCCCTCTTCAGCTCACAGGACAAGCTCCGGCTTCACGCGTTCTGTCACACAGGAGAGAAACCCTTCCACTGTTCCCAGCCCCACTGCCCTAAGGCTTTCAGCTCCAAATATAAGCTCTTTAGGCATATGGCCACACACTCCCCACAGAAGACTCATCAGTGCTCATTCTGTGAAAAGATGTTTCACCGCAAAGATCACCTGAAAAACCATCTGCAGACTCACGACCCCAACAAAGAGGCCTTTAAGTGCGAGGAGTGTGGCAAACACTATAACACGAAGCTGGGTTACAAGCGCCACATGGCCATGCACTCAGCCACAGCCGGTGATCTTACCTGTAAGGTGTGCTTGCAAAGCTACGAGAGCACGCCTGCACTCTTGGAGCACCTCAAGAGCCACTCAGGCAAGTCTTCAGGTGGTGCCAAGGAGAAGAAGCATCCCTGTGACCACTGCGATCGTCGCTTTTACACACGAAAGGATGTTCGCCGACACATGGTGGTTCACACGGGGCGCAAAGACTTCCTGTGCCAGTACTGTGCCCAGCGTTTTGGGCGGAAGGACCATCTGACACGGCATGTCAAGAAGAGCCACTCGCAGGAGTTGCTGAAGATCAAGACAGAGTCTCCTGATATGCTGGGTTTACTTGGGTCTGGTTCTCCACCTTGTGCTGTGAAAGAAGAAATAAGTCCTATGATGTGTAGCATGGGACCTACCAAGGACTCGATGATGGCAAAGCCTTTCCACGGTGCCACCCCTTTTCCCATGGGCATGTACAACCCTCATCACCTCCAGGCCATGTCCAGTCCTGGTGTGGGCCACCATCACTCACTGGTTCCAGGGTCTTTATCCACTGCCATGGGGATGGGTTGCCATATGGAGGCCCCGTCATCACTGCACCACCATCAcccacatcatcatcatcaccaccacccTCACCATCATCACCACTCCCCACCTCCACACCAGCAGCAGCCTCCCCTGCAAAGCCAGCAACAGCAGCACCCTCAGCCACCGCCCAAGTACCAGCTCGGATCTACCTCATACCTGCTGGAGAAGCCCCTGAAGGTGGAGATGGAGAGTTTCCTGATGGATCTACAGAGTGGACTCCCAGTTCCTCCACCGCCCTCAGCCGATCCCCACTCAGCAGCTTCGCCCAATAAGGAGGGTATGGAACCTCCGGCAGGACTGTCGGATGACCTTTGCGGGAACCCCCTCATGTCCAAGAGCCCCGCCGTCATTGCTGAGTCTTTGTGTGCTGCTAACATGGACTTTTCTCATCTGCTGGGCTTTCTTCCACTCAATCTGCCACCCTACAGTGCCCCCATGAGTTCAGGAGGACTGGTCATGGGTTACTCCACATCCTCCACcgtttcttcctcttcttcctcgtCGTCGTCAGCATCTTCACATGCTGCTGAACCACATGCTGCCACAGCCCCAGCTGCAGTGCCTCTTACCTCTTTGCAACCTCAACCTCAGGAGCAACCAGGCTCCGGTGGGGGTCTCGGTCTCGGGTCTCTGCACCCACTCCCACCAGTGTTCAGCTCTAGCCTCAGTACGACCACTCTGCCTCGCTTTCACCAGGCCTTTCAATGAGGTCCCCACCCCGACCTGACCTGCTACAGAGGCTCAGGGCAGAGGAGCGTCAGTGCTTCCCCTAGGGGTGGGGAGGTAGAACACTTGAACACATAGAAGCCTTAACAAAAGCGCACAACAGCTTTTTAATGAGCCTGGAGGAAAACAAGCATATGAAATATCATGGAGCTTTTATTTAGGCTGTCTGAATATTagctatgattttttttaaataccctTTTGAACCTCTCCCACCATCCCCTCTCCTACAATTTTGTAGTTAGACAGCAGCATCAGTAGGCCGTAAGGCATGGTACTGCATACTTTAATAATATGagtagaaaaaggaaaagattaaTGTAGAAAAGATAATCTGTCTTTGAGACTCTGAAAGATTAGTTTGAAGTGATATATGAATTTCGTTTTCTTTTCCAAATGTGAGGCCTGACTTTATTATATTGTCTCTATTCTATTAAGCTTATAAGTCAGGTAATAGCTGGTTGCCCTTAAACTAAAACCGTCTTCATGGCCAGGAGTGAAAGAATTAGTGAAGGAACGAAGGAGTGAAATAGGTTATTTCAAATTTAGATTTAATCAAGTTATTATTACAGATTCACATATGAATTTcaaaaagcagtttaaaaacaaatactgtgTACCTGATTTAGATGAAATTGTCATCTAAAATGTGTTCCTCCAGCTTTTTTATTGATGATACAAATTTAGACTTGTTGGAATGATCAgtaattagtttttctttaagaGAAGCAGAGGAACTGAAACTAGAAAGGCAaagagggtaaaaaaaaaactgcacaatttGTTCATTTGGTACAATGTGATCACTGACagaacaaaagcaaaagaaattcTACGTTATCTTACAGGTTTACAATTTTTCTCAAATGAAGCACTTTGTTTACAGCAGAAGGCACTTGACCCCTTTGGGTTGCCAAGGTGACCCACTGAAATCCCCTCCCTTTCCCCACTCTACCTTCACGCTTCCTGAAAAGAGACTGCCAttagactcacacacacacacacacacacacacacacacacacacacacaaagttcaACAACCCAAGTACCTTTGAATTCTCCACAGCAATCCGGTTTTCCTCCTTCCAGCACTAATTTTACGTCTCCGTGGCAACAATATCCCACCAGAtcatgatataaatatatgtattttaagaataaaaaaaaaaaaaaaaaaaaagtattttaggcAGGTTTATATTTTAGAGAGATACATTGTAATGATAACCCTGGTATATGTGAatggaaaaaagacaaaacaaaaacaagaatattttttttgcagtgtacgAAGTACcacatcaaaatatatatatatatataaatatattataatttcttctttttcagtacattttgtaatttagatagctgtattaaaaaattgctgatggattttaaaaaaatgtctagcAGGTTTACAGAATTATGTATCTTGCATCTTATTGAACAAAATGGATGAAGTATTAGCTTTTCCCTATAGCTTTCCCGTTCCTTGTTTTTTCCATGTGAGTCAAAAGAGATGAATAAGATGGGATTTTTCCTGCATATACTAGACTAATAGTGGCATAATCCAGTAGAATGGACTAGTCTTTAATCTTTAGAGCATGAGCTAGATGCCCATAATGTGATCCAGGTTTCagtttgcgtttttttttttttgttctcagtATTCGATCAGACCTGACTCATGCTGTctatttgtgtgtttggatgtacAGTTTTTAAACTCCACGATCATACGCCGTCGCACTGAAACGTCTGAAACCGCAATTCCAGTTGCTGTAGGTTCAGTTTAATATTACGCATTTCGAGGGGTTTTGTCATACAATCTCTTACAAGTTGCCATTTCCCAGCAAGTGGACTGCACAAGTTCTTACCAAATAATCATTCATTACCAATGGCCATGTGAGGAAGAGTCGTGTGCAAAGAACCAGATGACGATCGACGTACCAGCAGTGAAAGCAGTGCCTCATACAAACAGATGTATGTATCTCTCTCCCTTCACCTCATCCCTCTATTCTGCGTCCACATCTGTGTTTATAGTGAATGTGAATATCTCACAAGCAGAAAAGACCATAGAAAGGTAAAAGGCCACATCGCAAAacttaagacaaaacaatatAATGCTGCTCTTTGTGCTGTGGTTGCCAGCAACCATAGACCACTCtggaaacattttaaactgcaaaTGATCTTTTAGCAGAAAACATGCACAGTACACGTGAACTGTttgtccgttttttttttctgttcttcagCTGCTTTGATTCGaatgaacattttatgaaaaaggtCTGAAAAGAGACACAAAGAAGTCACCAGCCTGGTCTTTGACATTCAAAGCATGGGACATTTGATTGGGATATTGCCTAGTCGTTttgtcattatattattttctgtttgttgaAACAGGACCTCAAAACAACACAACGCATCacctcatttatttttttttttttttttttcataccaaAAACCTGGGGAGAATAAACTTCTTTTTGCACAATTGCTAACTAAAGAATAATCGGGTTAGTGTTGCTTATACTGTAAGAGTGTTTTTCGTTAGAAATAATTGTTTGAAAAGAGGGCGTTTGTCTACATCCTGCTCTGTCAGTGGGcttatcactatatatatatat
>XM_043225459.1
ACAAGCTCCGGCTTCACGCGTTCTGTCACACAGGAGAGAAACCCTTCCACTGTTCCCAGCCCCACTGCCCTAAGGCTTTCAGCTCCAAATATAAGCTCTTTAGGATAGTGCAGAGCATGAGGACGTGAGGACTGGAATTGAGAACCACCGGTATAAAGGAGTGTAGTCCAGTCCTGTTCCTGAAGGCccactgtcctgcaaagtttagctgAAGCCCTAGTTAAACACATCTGAATGAGCTAATCAAAGTCTTGAGGAATAACAGATAAAGGCACATTGAAACTTCCAGGCATATGGCCACACACTCCCCACAGAAGACTCATCAGTGCTCATTCTGTGAAAAGATGTTTCACCGCAAAGATCACCTGAAAAACCATCTGCAGACTCACGACCCCAACAAAGAGGCCTTTAAGTGCGAGGAGTGTGGCAAACACTATAACACGAAGCTGGGTTACAAGCGCCACATGGCCATGCACTCAGCCACAGCCGGTGATCTTACCTGTAAGGTGTGCTTGCAAAGCTACGAGAGCACGCCTGCACTCTTGGAGCACCTCAAGAGCCACTCAGGCAAGTCTTCAGGTGGTGCCAAGGAGAAGAAGCATCCCTGTGACCACTGCGATCGTCGCTTTTACACACGAAAGGATGTTCGCCGACACATGGTGGTTCACACGGGGCGCAAAGACTTCCTGTGCCAGTACTGTGCCCAGCGTTTTGGGCGGAAGGACCATCTGACACGGCATGTCAAGAAGAGCCACTCGCAGGAGTTGCTGAAGATCAAGACAGAGTCTCCTGATATGCTGGGTTTACTTGGGTCTGGTTCTCCACCTTGTGCTGTGAAAGAAGAAATAAGTCCTATGATGTGTAGCATGGGACCTACCAAGGACTCGATGATGGCAAAGCCTTTCCACGGTGCCACCCCTTTTCCCATGGGCATGTACAACCCTCATCACCTCCAGGCCATGTCCAGTCCTGGTGTGGGCCACCATCACTCACTGGTTCCAGGGTCTTTATCCACTGCCATGGGGATGGGTTGCCATATGGAGGCCCCGTCATCACTGCACCACCATCAcccacatcatcatcatcaccaccacccTCACCATCATCACCACTCCCCACCTCCACACCAGCAGCAGCCTCCCCTGCAAAGCCAGCAACAGCAGCACCCTCAGCCACCGCCCAAGTACCAGCTCGGATCTACCTCATACCTGCTGGAGAAGCCCCTGAAGGTGGAGATGGAGAGTTTCCTGATGGATCTACAGAGTGGACTCCCAGTTCCTCCACCGCCCTCAGCCGATCCCCACTCAGCAGCTTCGCCCAATAAGGAGGGTATGGAACCTCCGGCAGGACTGTCGGATGACCTTTGCGGGAACCCCCTCATGTCCAAGAGCCCCGCCGTCATTGCTGAGTCTTTGTGTGCTGCTAACATGGACTTTTCTCATCTGCTGGGCTTTCTTCCACTCAATCTGCCACCCTACAGTGCCCCCATGAGTTCAGGAGGACTGGTCATGGGTTACTCCACATCCTCCACcgtttcttcctcttcttcctcgtCGTCGTCAGCATCTTCACATGCTGCTGAACCACATGCTGCCACAGCCCCAGCTGCAGTGCCTCTTACCTCTTTGCAACCTCAACCTCAGGAGCAACCAGGCTCCGGTGGGGGTCTCGGTCTCGGGTCTCTGCACCCACTCCCACCAGTGTTCAGCTCTAGCCTCAGTACGACCACTCTGCCTCGCTTTCACCAGGCCTTTCAATGAGGTCCCCACCCCGACCTGACCTGCTACAGAGGCTCAGGGCAGAGGAGCGTCAGTGCTTCCCCTAGGGGTGGGGAGGTAGAACACTTGAACACATAGAAGCCTTAACAAAAGCGCACAACAGCTTTTTAATGAGCCTGGAGGAAAACAAGCATATGAAATATCATGGAGCTTTTATTTAGGCTGTCTGAATATTagctatgattttttttaaataccctTTTGAACCTCTCCCACCATCCCCTCTCCTACAATTTTGTAGTTAGACAGCAGCATCAGTAGGCCGTAAGGCATGGTACTGCATACTTTAATAATATGagtagaaaaaggaaaagattaaTGTAGAAAAGATAATCTGTCTTTGAGACTCTGAAAGATTAGTTTGAAGTGATATATGAATTTCGTTTTCTTTTCCAAATGTGAGGCCTGACTTTATTATATTGTCTCTATTCTATTAAGCTTATAAGTCAGGTAATAGCTGGTTGCCCTTAAACTAAAACCGTCTTCATGGCCAGGAGTGAAAGAATTAGTGAAGGAACGAAGGAGTGAAATAGGTTATTTCAAATTTAGATTTAATCAAGTTATTATTACAGATTCACATATGAATTTcaaaaagcagtttaaaaacaaatactgtgTACCTGATTTAGATGAAATTGTCATCTAAAATGTGTTCCTCCAGCTTTTTTATTGATGATACAAATTTAGACTTGTTGGAATGATCAgtaattagtttttctttaagaGAAGCAGAGGAACTGAAACTAGAAAGGCAaagagggtaaaaaaaaaactgcacaatttGTTCATTTGGTACAATGTGATCACTGACagaacaaaagcaaaagaaattcTACGTTATCTTACAGGTTTACAATTTTTCTCAAATGAAGCACTTTGTTTACAGCAGAAGGCACTTGACCCCTTTGGGTTGCCAAGGTGACCCACTGAAATCCCCTCCCTTTCCCCACTCTACCTTCACGCTTCCTGAAAAGAGACTGCCAttagactcacacacacacacacacacacacacacacacacacacacacaaagttcaACAACCCAAGTACCTTTGAATTCTCCACAGCAATCCGGTTTTCCTCCTTCCAGCACTAATTTTACGTCTCCGTGGCAACAATATCCCACCAGAtcatgatataaatatatgtattttaagaataaaaaaaaaaaaaaaaaaaaagtattttaggcAGGTTTATATTTTAGAGAGATACATTGTAATGATAACCCTGGTATATGTGAatggaaaaaagacaaaacaaaaacaagaatattttttttgcagtgtacgAAGTACcacatcaaaatatatatatatatataaatatattataatttcttctttttcagtacattttgtaatttagatagctgtattaaaaaattgctgatggattttaaaaaaatgtctagcAGGTTTACAGAATTATGTATCTTGCATCTTATTGAACAAAATGGATGAAGTATTAGCTTTTCCCTATAGCTTTCCCGTTCCTTGTTTTTTCCATGTGAGTCAAAAGAGATGAATAAGATGGGATTTTTCCTGCATATACTAGACTAATAGTGGCATAATCCAGTAGAATGGACTAGTCTTTAATCTTTAGAGCATGAGCTAGATGCCCATAATGTGATCCAGGTTTCagtttgcgtttttttttttttgttctcagtATTCGATCAGACCTGACTCATGCTGTctatttgtgtgtttggatgtacAGTTTTTAAACTCCACGATCATACGCCGTCGCACTGAAACGTCTGAAACCGCAATTCCAGTTGCTGTAGGTTCAGTTTAATATTACGCATTTCGAGGGGTTTTGTCATACAATCTCTTACAAGTTGCCATTTCCCAGCAAGTGGACTGCACAAGTTCTTACCAAATAATCATTCATTACCAATGGCCATGTGAGGAAGAGTCGTGTGCAAAGAACCAGATGACGATCGACGTACCAGCAGTGAAAGCAGTGCCTCATACAAACAGATGTATGTATCTCTCTCCCTTCACCTCATCCCTCTATTCTGCGTCCACATCTGTGTTTATAGTGAATGTGAATATCTCACAAGCAGAAAAGACCATAGAAAGGTAAAAGGCCACATCGCAAAacttaagacaaaacaatatAATGCTGCTCTTTGTGCTGTGGTTGCCAGCAACCATAGACCACTCtggaaacattttaaactgcaaaTGATCTTTTAGCAGAAAACATGCACAGTACACGTGAACTGTttgtccgttttttttttctgttcttcagCTGCTTTGATTCGaatgaacattttatgaaaaaggtCTGAAAAGAGACACAAAGAAGTCACCAGCCTGGTCTTTGACATTCAAAGCATGGGACATTTGATTGGGATATTGCCTAGTCGTTttgtcattatattattttctgtttgttgaAACAGGACCTCAAAACAACACAACGCATCacctcatttatttttttttttttttttttcataccaaAAACCTGGGGAGAATAAACTTCTTTTTGCACAATTGCTAACTAAAGAATAATCGGGTTAGTGTTGCTTATACTGTAAGAGTGTTTTTCGTTAGAAATAATTGTTTGAAAAGAGGGCGTTTGTCTACATCCTGCTCTGTCAGTGGGcttatcactatatatatatat

Function

symbol description
plagl2 Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within transcription, DNA-templated. Predicted to be active in nucleus. Is expressed in several structures, including axial vasculature; immature eye; lateral plate mesoderm; nervous system; and otic vesicle. Orthologous to human PLAGL2 (PLAG1 like zinc finger 2).

NR:

description
PREDICTED: zinc finger protein PLAGL2

GO:

id name namespace
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function

KEGG:

id description
K19486 PLAGL2; zinc finger protein PLAGL2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225458.1 True 4814 mRNA 0.45 4 7884296 7920041
XM_043225459.1 False 4423 mRNA 0.43 3 7914320 7920041

Neighbor

gene id symbol gene type direction distance location
LOC122328711 LOC107707759,LOC107559486,LOC107747485,LOC107690852,LOC107558232,LOC100536777,LOC107681385,LOC108440950 coding upstream 62503 7815091 ~ 7821793 (+)
LOC122328639 LOC107707759,LOC107559486,LOC107747485,LOC107690852,LOC107558232,LOC100536777,LOC107681385,LOC108440950 coding upstream 110324 7766223 ~ 7773972 (+)
myt1b myt1b,LOC107690850,LOC107747484,LOC107681384,LOC107559484,LOC107558231 coding upstream 119244 7684304 ~ 7765052 (+)
oprl1 oprl1,LOC107727003,LOC107681404,LOC107666560,LOC107705672,LOC106572940 coding upstream 396760 7459498 ~ 7487536 (+)
soga1 LOC107727023,LOC107705691,LOC107681366,LOC107666465 coding upstream 1111310 6730816 ~ 6772986 (+)
slco4a1 slco4a1,LOC107603147,LOC107681874,LOC107559480,LOC107657069,LOC107707756 coding downstream 194900 8114941 ~ 8132951 (+)
ntsr1 ntsr1,LOC107559468,LOC107747990,LOC107707740,LOC107671946,LOC107657007,LOC107603109 coding downstream 236152 8156193 ~ 8175519 (+)
LOC122329211 ccdc178,LOC107555255,LOC107667113,LOC107599731 coding downstream 361185 8281226 ~ 8307764 (+)
LOC122328648 abcd4,LOC107667197,LOC107677172 coding downstream 414913 8334954 ~ 8341779 (+)
LOC122329212 LOC107732057,LOC107718040,LOC107555247,LOC107677163,LOC107599733,LOC107667194 coding downstream 431759 8351800 ~ 8353910 (+)
LOC122328944 NA non-coding upstream 15622 7866780 ~ 7868674 (+)
G155619 NA non-coding upstream 483107 7400990 ~ 7401189 (+)
G155509 NA non-coding upstream 1045135 6836963 ~ 6839161 (+)
G155457 NA non-coding upstream 1062246 6797111 ~ 6822050 (+)
LOC122328804 NA non-coding upstream 1156086 6725037 ~ 6728210 (+)
G155651 NA non-coding downstream 162 7920203 ~ 7921525 (+)
G155645 NA non-coding downstream 1981 7922022 ~ 7923577 (+)
G155655 tm9sf4,LOC107681873 non-coding downstream 9692 7929733 ~ 7932056 (+)
G155660 NA non-coding downstream 18565 7938606 ~ 7939756 (+)
G155701 gata5,LOC107681871,LOC107603108,LOC107559469,LOC107747495,LOC107707745 non-coding downstream 64054 7984095 ~ 7985586 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other upstream 578762 7298360 ~ 7305534 (+)
G155561 NA other upstream 645377 7225994 ~ 7238919 (+)
si:ch211-220i18.4 LOC107551506,LOC107666586,LOC107559855,LOC107681367,LOC107705652,LOC108275527,LOC107100285 other upstream 1285764 6592602 ~ 6598532 (+)
LOC122328459 g6pd,LOC107723128,LOC107697003,LOC107594489 other upstream 3048812 4817365 ~ 4835484 (+)
ube2t ube2t,LOC107746510,LOC107707375,LOC107673550 other upstream 4187274 3694652 ~ 3697022 (+)
LOC122328506 klhl14,LOC107677170,LOC107599684,LOC107554641,LOC107717384 other downstream 401664 8321705 ~ 8333376 (+)
G155799 NA other downstream 568045 8488086 ~ 8488641 (+)
lzic lzic,LOC107708836,LOC107718820,LOC107681991,LOC107570802,LOC107695771,LOC107586557 other downstream 1020990 8941031 ~ 9101372 (+)
G155927 zgc:194189,LOC107570831,LOC107708788,LOC107681978,LOC107695725,LOC107586555,LOC107718823 other downstream 1200843 9120884 ~ 9122393 (+)
G156081 phip,LOC107656532,LOC107708770,LOC107549027 other downstream 1763705 9683746 ~ 9769620 (+)

Expression


Co-expression Network