LOC122329255 (klhdc8b,LOC107712738,LOC107671938,LOC106572099,LOC107570270)


Basic Information

Item Value
gene id LOC122329255
gene name klhdc8b,LOC107712738,LOC107671938,LOC106572099,LOC107570270
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11544530 ~ 11630976 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225460.1
TTCTAATGGCAACACGTGCTTCTCTTCTTGTTGTGCTGCACGAGCACAGAGAGGTTGAGACGATGAGGGgaacacacaacacaaactgACACGCAATCTAGTTAGCGCTTTTTTAAAGTCCGCTGAAGCAACAAAGCATTGCAGAGTCGCTGCAGATAAATAACACGAGCGGCGAGACCAAGCTTGAAAAGAGTTGtataaaaaatgctgtaagaTAAACCCGCACTTCCTTGTCGTTGACTTCGTAGTTCTCTGTCCTGAGTAACTAAGAGGTGCTGAACGTATCCAGCATGCAGACAGCGCGTGTGAGCGTTCAGGGGAGGGCGAAGAAAGTGGTGCTGAGCCAATGGAGATACTCATGCGAGGAGCATCTGTCCTAAACCCGAACTAACCGCTGGCATAACGCTACTGTCTCCCGCGCGAGAGGCGCGTCGAGGTGATAATCCGGCCGAAGTTTGAAGAAGCTCGCTCTCATTCGCCGACTTTGGGAGATTCGCTCGAGCAGGACGAAACGCGAAGGCAATGCAGACAGAAGCTGATGTTTATCCCACGGATCTACTGGACAGTACAAACCCATGACGACATCCCACAAATCCCGGGAGACTCTTTTTAAATGTGGATTAAAGTCTACAGCAAGGAAACTAGAGCTTAAACAGCTGGGATTTTCCCATGTTCCTGACATCATCTATAGGAAATGAGATCTAGACGTCTATCTTTTCTCTCCACATGGACGAAAAGCCAAGGAAAGTGTACTAAAAGCTGACGGACAGGATTAATTTTACTTACAAAACTGCCCCTTTATCTTTAAACCCAAAGAAGAGCCTGATGGTGTCATATGATATGGACTAATTGTACTGAGTAAGAGCGCCCAGCGGCAGCACTTTGGCTCCAGATGAAACTGATGTTTTTCTGCATAATTTTTAGTCAGTCTGGAGCCGTTAGCCCTTCCGCACTGTGTTTCGTAGCATGTGGCTTGGGCTCAACATCCACAGCATCTTAATTACACAGCTGAACCGATTTAGACCACGGAGGAAGCATCTCTACATCTGGAGATACGCTGACATTTTTTAGGAGGATGTGCAGACATCTGATGTGCTCTTCTGACGTTTTTTCGTACCTATGAGATTTCCTAAAAGAAGCCCAAGAGCTCCCACTCTCTTCCGCACCTACGGCAGCCATGAGGATCGTACCGACACATTTGGCAGGACTACAGAACGGCATTCCACGTGGATAAATTAGTTTGTTTCGTGTCGGGGTTACGCATTCTTGCCATATATTTTTACAACCGCACGGCTCGTGGAAGACGACAGGAAAGACTTAAAAGGGCCTGATGCACCTTTTAAGAGCagcaacaaaaatgaataaatcatcaAGAGGGAGTGAGGGCTAGTTCTTCACAGACATTGCTGAAGGAAACGCTCTTCTCCCCTCCACCAGCCTCTCCTGCTCTTTAGCCTGGTGGATTGTTGATGCATTTGCCTTGAGTTTGGCGTTCCTCAGCCCTCCTCCTCCGTGCCTGTGTCATGCTCTGTTGCCGGCGTGCCATCCTGGAGCCATGCCCATCCCTGAGATGGCTTTGAGCCCGGTGAAGTCTCTGTACTGGGAGGTGTTCCCCTCCATGGCCACGCAGCGGGTGTACTGCACGCCTGTGCTCTGGGCCGGACGCCTCTATGTCCTGGGGGGCTGCAGTGAGAACGGCCTCCCTCTAGACTCGGCCGAGGTGCTGGATCTGGAGAGTCAGCGCTGGTGCGAGCTGCCCCCTCTCCCCACCGCGCGGGCCGGGGCGTCGTCTGTGGCTGTCGGAGACCAGCTGATGGTCATGGGAGGTATGGACGCACAGCAGAGCCCGCTGGCCTCGGTGGAAGTTTATCACCCCGATGAGGGCAAGTGGGAGAGGAAGACGGGACTGGGACAGGCCTCCATGGGGATCACCACGCTGGAGAAAGATGGCAAGGTGTATGCCCTGGGCGGGATGGGAGCCGACACGACCCCTCAGGCCTCAGTGAGGCTGTATGAGCCGACAAAAGACCAGTGGCTGCCCCTCACTTCTATGCCCACCCCACGCTACGGAGCCTTCTCTTTCCTGCGCGGTAACAAGATCTATGTTCTGGGTGGGCGTCAAGGCAAGCTGCCAGTGACCGCATTCGAGGCCTTCGACCTTGAGATGAAGAGCTGGACGCGGTACCCGTGCATCCCCAGCCGCAGAGCGTTCTCCTCGTGCGCTGCCAGCGACAGTGCGTTTTTCAGCCTGGGGGGTCTTCAGCAGCCTGGACCCCACAACTTTTACTCCAGACCTCACTTCGTCTCCACTGTAGAGGAATTTGATTGTGAGCAGGGTGTGTGGTTGAAGGCCACGCGGAGCTGTCGCATGAGAGAGAAGCGGGCGGACTTCGTAGCTGGCTGTCTCGGTGGACGGGTCATCGCTGCTGGGGGACTCGGTAACCAGCCGTCCCCGCTGGCCTCAGTGGAGAGTTATAACCAGCTGAAGAGGAGATGGGAAACCGTGGCCCCGTTACCCAGCCCTCGCTGCTCCTGTGCCTCCATTCAGACCCCAAACATGCTGTTTCTCATCGGAGGGGTGTCCCAAGGTCCCAGCAACGCCGTGGAAGCCCTCTGCTTTAAAGAGACCgtctgacacacaaacacatgctacTGAACAACTACCCAAATCCTCACATGCTGTACTTTCCGGAGTGTAAGCtccgcaaacacacacacacacacacacacacacacaagtgcatACTGACGTCAagctgacgtgtgtgtgtgtgtctctctgacAAATATTCACAGACTTTCCCCTCAGAGGACGCATCAGCTTTATACTTTGAATAGTGGAGACAATCTACTGGAGCTTGGACAGCGTTCCACACCTCTGGACAGAGAAGTTTTGGACTGGAGATCTAAGACAagcaaaaaatacttaaatatatcaTTCATCTAACTATATTAtgtatagtaaatatatttattaacatatatatatatatttaaatatataattctaattatattaatatatagagATAGATGTGCAGACCTACACGGACAGACACACGCAAGCACTCCAGGCGCCTTTGAACTGTACGACATTTTTCAGTATCAAAGCAGGGTAATTTTCTGGCAAACTAAAGAGGAACTTAGGGCCATATCCACCACGCTGCCACAGCACCCGTCTGAGGTAGCATGTTTAGCACTTTTTGTATTATTGACAAACAAAGGATCTTCTGCACGAGACTACAGAAACGGGAGGCGGatgcttgtgtgtttttgtaccTTCACAGCCATGCACGTGTGAAATTGAGCATTGTTACGCGTGGAAAGAGCAACTCTTTTAACGGCAAATCACTGATGCCTCACTGTAGCATGAGACGGgggagatggaggagaacaGGGTTCATCTAGCCGGTTAATTAAAGGAACGCTCTGGGTTCAAAACTGATTTAGCTTGAAAGTATCTCGATTAGCACAGATCATCATTTTAAAGCGTccataaaaacaagcaaagaatGCATTAACAGTAATGCTCTTGCAGTGGGCAGTTAAAGGGCAaggcatgcatttttattaaagtggtattaataattctttttttacaaaaatctgttatttaacatgttatttattaagatattttgtgttttttaaagaagtccTTTAAGCTCACcaagattgcattta
>XM_043225461.1
ATTTCCAAATTCTGTATCACGCATTCTAATGGCAACACGTGCTTCTCTTCTTGTTGTGCTGCACGAGCACAGAGAGGTTGAGACGATGAGGGgaacacacaacacaaactgACACGCAATCTAGTTAGCGCTTTTTTAAAGTCCGCTGAAGCAACAAAGCATTGCAGAGTCGCTGCAGATAAATAACACGAGCGGCGAGACCAAGCTTGAAAAGAGTTGtataaaaaatgctgtaagaTAAACCCGCACTTCCTTGTCGTTGACTTCGTAGTTCTCTGTCCTGAGTAACTAAGAGGTGCTGAACGTATCCAGCATGCAGACAGCGCGTGTGAGCGTTCAGGGGAGGGCGAAGAAAGTGGTGCTGAGCCAATGGAGATACTCATGCGAGGAGCATCTGTCCTAAACCCGAACTAACCGCTGGCATAACGCTACTGTCTCCCGCGCGAGAGGCGCGTCGAGGTGATAATCCGGCCGAAGTTTGAAGAAGCTCGCTCTCATTCGCCGACTTTGGGAGATTCGCTCGAGCAGGACGAAACGCGAAGGCAATGCAGACAGAAGCTGATGTTTATCCCACGGATCTACTGGACAGTACAAACCCATGACGACATCCCACAAATCCCGGGAGACTCTTTTTAAATGTGGATTAAAGTCTACAGCAAGGAAACTAGAGCTTAAACAGCTGGGATTTTCCCATGTTCCTGACATCATCTATAGGAAATGAGATCTAGACGTCTATCTTTTCTCTCCACATGGACGAAAAGCCAAGGAAAGTGTACTAAAAGCTGACGGACAGGATTAATTTTACTTACAAAACTGCCCCTTTATCTTTAAACCCAAAGAAGAGCCTGATGGTGTCATATGATATGGACTAATTGTACTGAGTAAGAGCGCCCAGCGGCAGCACTTTGGCTCCAGATGAAACTGATGTTTTTCTGCATAATTTTTAGTCAGTCTGGAGCCGTTAGCCCTTCCGCACTGTGTTTCGTAGCATGTGGCTTGGGCTCAACATCCACAGCATCTTAATTACACAGCTGAACCGATTTAGACCACGGAGGAAGCATCTCTACATCTGGAGATACGCTGACATTTTTTAGGAGGATGTGCAGACATCTGATGTGCTCTTCTGACGTTTTTTCGTACCTATGAGATTTCCTAAAAGAAGCCCAAGAGCTCCCACTCTCTTCCGCACCTACGGCAGCCATGAGGATCGTACCGACACATTTGGCAGGACTACAGAACGGCATTCCACGTGGATAAATTAGTTTGTTTCGTGTCGGGGTTACGCATTCTTGCCATATATTTTTACAACCGCACGGCTCGTGGAAGACGACAGGAAAGACTTAAAAGGGCCTGATGCACCTTTTAAGAGCagcaacaaaaatgaataaatcatcaAGAGGGAGTGAGGGCTAGTTCTTCACAGACATTGCTGAAGGAAACGCTCTTCTCCCCTCCACCAGCCTCTCCTGCTCTTTAGCCTGGTGGATTGTTGATGCATTTGCCTTGAGTTTGGCGTTCCTCAGCCCTCCTCCTCCGTGCCTGTGTCATGCTCTGTTGCCGGCGTGCCATCCTGGAGCCATGCCCATCCCTGAGATGGCTTTGAGCCCGGTGAAGTCTCTGTACTGGGAGGTGTTCCCCTCCATGGCCACGCAGCGGGTGTACTGCACGCCTGTGCTCTGGGCCGGACGCCTCTATGTCCTGGGGGGCTGCAGTGAGAACGGCCTCCCTCTAGACTCGGCCGAGGTGCTGGATCTGGAGAGTCAGCGCTGGTGCGAGCTGCCCCCTCTCCCCACCGCGCGGGCCGGGGCGTCGTCTGTGGCTGTCGGAGACCAGCTGATGGTCATGGGAGGTATGGACGCACAGCAGAGCCCGCTGGCCTCGGTGGAAGTTTATCACCCCGATGAGGGCAAGTGGGAGAGGAAGACGGGACTGGGACAGGCCTCCATGGGGATCACCACGCTGGAGAAAGGTGGGCGTCAAGGCAAGCTGCCAGTGACCGCATTCGAGGCCTTCGACCTTGAGATGAAGAGCTGGACGCGGTACCCGTGCATCCCCAGCCGCAGAGCGTTCTCCTCGTGCGCTGCCAGCGACAGTGCGTTTTTCAGCCTGGGGGGTCTTCAGCAGCCTGGACCCCACAACTTTTACTCCAGACCTCACTTCGTCTCCACTGTAGAGGAATTTGATTGTGAGCAGGGTGTGTGGTTGAAGGCCACGCGGAGCTGTCGCATGAGAGAGAAGCGGGCGGACTTCGTAGCTGGCTGTCTCGGTGGACGGGTCATCGCTGCTGGGGGACTCGGTAACCAGCCGTCCCCGCTGGCCTCAGTGGAGAGTTATAACCAGCTGAAGAGGAGATGGGAAACCGTGGCCCCGTTACCCAGCCCTCGCTGCTCCTGTGCCTCCATTCAGACCCCAAACATGCTGTTTCTCATCGGAGGGGTGTCCCAAGGTCCCAGCAACGCCGTGGAAGCCCTCTGCTTTAAAGAGACCgtctgacacacaaacacatgctacTGAACAACTACCCAAATCCTCACATGCTGTACTTTCCGGAGTGTAAGCtccgcaaacacacacacacacacacacacacacacaagtgcatACTGACGTCAagctgacgtgtgtgtgtgtgtctctctgacAAATATTCACAGACTTTCCCCTCAGAGGACGCATCAGCTTTATACTTTGAATAGTGGAGACAATCTACTGGAGCTTGGACAGCGTTCCACACCTCTGGACAGAGAAGTTTTGGACTGGAGATCTAAGACAagcaaaaaatacttaaatatatcaTTCATCTAACTATATTAtgtatagtaaatatatttattaacatatatatatatatttaaatatataattctaattatattaatatatagagATAGATGTGCAGACCTACACGGACAGACACACGCAAGCACTCCAGGCGCCTTTGAACTGTACGACATTTTTCAGTATCAAAGCAGGGTAATTTTCTGGCAAACTAAAGAGGAACTTAGGGCCATATCCACCACGCTGCCACAGCACCCGTCTGAGGTAGCATGTTTAGCACTTTTTGTATTATTGACAAACAAAGGATCTTCTGCACGAGACTACAGAAACGGGAGGCGGatgcttgtgtgtttttgtaccTTCACAGCCATGCACGTGTGAAATTGAGCATTGTTACGCGTGGAAAGAGCAACTCTTTTAACGGCAAATCACTGATGCCTCACTGTAGCATGAGACGGgggagatggaggagaacaGGGTTCATCTAGCCGGTTAATTAAAGGAACGCTCTGGGTTCAAAACTGATTTAGCTTGAAAGTATCTCGATTAGCACAGATCATCATTTTAAAGCGTccataaaaacaagcaaagaatGCATTAACAGTAATGCTCTTGCAGTGGGCAGTTAAAGGGCAaggcatgcatttttattaaagtggtattaataattctttttttacaaaaatctgttatttaacatgttatttattaagatattttgtgttttttaaagaagtccTTTAAGCTCACcaagattgcattta

Function

symbol description
klhdc8b Human ortholog(s) of this gene implicated in Hodgkin's lymphoma. Orthologous to human KLHDC8B (kelch domain containing 8B).

NR:

description
PREDICTED: kelch domain-containing protein 8B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225460.1 True 3684 mRNA 0.49 7 11544530 11630953
XM_043225461.1 False 3542 mRNA 0.49 6 11544530 11630976

Neighbor

gene id symbol gene type direction distance location
guca1b guca1b,LOC107657012,LOC107562461,LOC107560929,LOC107672062 coding downstream 8519 11532641 ~ 11536011 (-)
oard1 oard1,LOC107672023,LOC107712742,LOC107657014 coding downstream 12720 11530037 ~ 11531810 (-)
trnah-gug_32 NA coding downstream 26449 11518010 ~ 11518081 (-)
LOC122328724 ebp,LOC107672060,LOC107712744,LOC107657016 coding downstream 26828 11516137 ~ 11517702 (-)
pard6b pard6b,LOC107737628,LOC107560924,LOC107657018,LOC107712746,LOC107562464,LOC108436329,LOC107671939 coding downstream 37245 11490166 ~ 11507285 (-)
tasorb LOC107737622,LOC107671998,LOC107712737,LOC107570279 coding upstream 7637 11638613 ~ 11651271 (-)
asb14b asb14b,LOC107560887,LOC107671999,LOC107737718,LOC108436293,LOC108276494 coding upstream 20423 11651399 ~ 11656603 (-)
dnah12 dnah12 coding upstream 26515 11657491 ~ 11683407 (-)
ognb zgc:193598,LOC107671963,LOC107737613,LOC107570281,LOC107699558 coding upstream 101255 11732231 ~ 11734946 (-)
LOC122328548 LOC107560872,LOC107712665,LOC107737683,LOC107671934 coding upstream 105921 11736897 ~ 11737585 (-)
G156812 NA non-coding downstream 4485 11539623 ~ 11540045 (-)
LOC122328925 NA non-coding downstream 167842 11376177 ~ 11376688 (-)
G156785 NA non-coding downstream 190702 11353159 ~ 11353828 (-)
G156762 NA non-coding downstream 299710 11242600 ~ 11244820 (-)
G156759 NA non-coding downstream 381511 11162664 ~ 11163019 (-)
G156962 NA non-coding upstream 131464 11762440 ~ 11763023 (-)
G156971 NA non-coding upstream 150591 11781567 ~ 11782366 (-)
G156972 NA non-coding upstream 162627 11793603 ~ 11851710 (-)
G156978 NA non-coding upstream 424270 12055246 ~ 12061368 (-)
G156973 NA non-coding upstream 430471 12061447 ~ 12064715 (-)
G156746 NA other downstream 439307 11100744 ~ 11105223 (-)
LOC122328798 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other downstream 866380 10675680 ~ 10678150 (-)
ankrd52a ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831,LOC107723718 other downstream 1158563 10218473 ~ 10385967 (-)
LOC122328546 rpl10 other upstream 110424 11741400 ~ 11746620 (-)
LOC122329329 NA other upstream 114286 11745262 ~ 11745395 (-)
atp2b3b atp2b3b,atp2b3,LOC107737604,LOC107712727,LOC107672007,LOC107593407 other upstream 132733 11763709 ~ 11857968 (-)
si:dkey-93l1.9 si:dkey-93l1.9,LOC107699586,LOC107593449,LOC107671978,LOC107699561,LOC107576394,LOC107737609 other upstream 168946 11799922 ~ 11801632 (-)
G156985 NA other upstream 291868 11922844 ~ 11924650 (-)

Expression


Co-expression Network