LOC122329294 (mrgbp,LOC107724191,LOC107705719,LOC107696984,LOC107693561)


Basic Information

Item Value
gene id LOC122329294
gene name mrgbp,LOC107724191,LOC107705719,LOC107696984,LOC107693561
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 5444767 ~ 5449598 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225522.1
GCCAGAGTAATGTCCGGGTGTgttgtatctgtgtgtgttgtcGTGTGTTGATGAAGCGGTGAAGCGTCGCTCAGAGTCGCTGCAGAAACATGGGGGAAGCCGAGGCTGTGCCGTCCGACGAAAAACAAGCAGAAACCGGCATCTGTACCGCCGAGGAATCGATTGTATGGAGCCAGGAGGTGGAAGTGTGTCTTTTTCACGCAATGCTGGGACACAAACCCGTAGGAGTGAATCGACATTTCCACATGATCTGTATTCGCGATAAGTTCAGCCAGAACATCGGCAGGCAGGTGTCCTCTAAAGTCATCTGGGATCACCTGAGCACCATGTATGACATGCAGGCGCTGCATGAATCAGAAATACTCCCGTTTCCAAACTCTGAGAAGAGCTTTGTTCTGCCTGAAGAGATCATACAGGATGTCAAGGAAGGTAAAGTGGGATCTGAAGAAGACGTGAAGGAGGAGTTCAAAGAAGAAAGTGACCCACCTGCAACCCACGAAGAAGGTCTGGGTCCCAGTATGGCTGGCCAGGATTTTGCGAGCAATTGCTCCGTGAAGCTTTTGGAGAGGTCGGACAGCGGGcgcgagaaagagagacagcGGGCAGAGAGGGGGGGCTCAGGTGAGACGGGCAGCGGGTCGAAAGAATCAGCCGGggaaaagaggaagaggagtcGAGCCGTGGAAAAGGTGATGAACTCCAGCAACCCCTCCAGCCCTGGGGGAGCCAAACGCCGCAGGACGTAGCCGCAGCTTGCAGCGGGGCGATTCGGGACATCAGACATTTGGAAAGAACTGACGGAGGAAGGCGTAGCTAATATTGGTCTCGCTACAGCCAATGCGAAAGTGAAATGGCGAGCAGGGGATGTGTGATGTTCGTGTCTGCGTTATCTCATG
>XM_043225523.1
AAAGCCAGAGTAATGTCCGGGTGTgttgtatctgtgtgtgttgtcGTGTGTTGATGAAGCGGTGAAGCGTCGCTCAGAGTCGCTGCAGAAACATGGGGGAAGCCGAGGCTGTGCCGTCCGACGAAAAACAAGCAGAAACCGGCATCTGTACCGCCGAGGAATCGATTGTATGGAGCCAGGAGGTGGAAGTGTGTCTTTTTCACGCAATGCTGGGACACAAACCCGTAGGAGTGAATCGACATTTCCACATGATCTGTATTCGCGATAAGTTCAGCCAGAACATCGGCAGGCAGGTGTCCTCTAAAGTCATCTGGGATCACCTGAGCACCATGTATGACATGCAGGCGCTGCATGAATCAGAAATACTCCCGTTTCCAAACTCTGAGAAGAGCTTTGTTCTGCCTGAAGAGATCATACAGGATGTCAAGGAAGGTAAAGTGGGATCTGAAGAAGACGTGAAGGAGGAGTTCAAAGAAGAAAGTGACCCACCTGCAACCCACGAAGAAGGTCTGGGTCCCAGTATGGCTGGCCAGGATTTTGCGAGGTATGGACAGAAGAAAACGTTTCGCTCTGTTCCAAAACTCCAGCTTGAGCTCAGTACAGACCAGCTCATTACCAGAGGCCTCTGTAGACAGCCTTCAGAGACCTCTGACCATCAATTGCTCCGTGAAGCTTTTGGAGAGGTCGGACAGCGGGcgcgagaaagagagacagcGGGCAGAGAGGGGGGGCTCAGGTGAGACGGGCAGCGGGTCGAAAGAATCAGCCGGggaaaagag
>XM_043225524.1
CAGAGTAATGTCCGGGTGTgttgtatctgtgtgtgttgtcGTGTGTTGATGAAGCGGTGAAGCGTCGCTCAGAGTCGCTGCAGAAACATGGGGGAAGCCGAGGCTGTGCCGTCCGACGAAAAACAAGCAGAAACCGGCATCTGTACCGCCGAGGAATCGATTGTATGGAGCCAGGAGGTGGAAGTGTGTCTTTTTCACGCAATGCTGGGACACAAACCCGTAGGAGTGAATCGACATTTCCACATGATCTGTATTCGCGATAAGTTCAGCCAGAACATCGGCAGGCAGGTGTCCTCTAAAGTCATCTGGGATCACCTGAGCACCATGTATGACATGCAGGCGCTGCATGAATCAGAAATACTCCCGTTTCCAAACTCTGAGAAGAGCTTTGTTCTGCCTGAAGAGATCATACAGGATGTCAAGGAAGGTAAAGTGGGATCTGAAGAAGACGTGAAGGAGGAGTTCAAAGAAGAAAGTGACCCACCTGCAACCCACGAAGAAGGCAGCAATTGCTCCGTGAAGCTTTTGGAGAGGTCGGACAGCGGGcgcgagaaagagagacagcGGGCAGAGAGGGGGGGCTCAGGTGAGACGGGCAGCGGGTCGAAAGAATCAGCCGGggaaaagaggaagaggagtcGAGCCGTGGAAAAGGTGATGAACTCCAGCAACCCCTCCAGCCCTGGGGGAGCCAAACGCCGCAGGACGTAGCCGCAGCTTGCAGCGGGGCGATTCGGGACATCAGACATTTGGAAAGAACTGACGGAGGAAGGCGTAGCTAATATTGGTCTCGCTACAGCCAATGCGAAAGTGAAATGGCGAGCAGGGGATGTGTGATGTTCGTGTCTGCGTTATCTCAT
>XM_043225525.1
AAAGCCAGAGTAATGTCCGGGTGTgttgtatctgtgtgtgttgtcGTGTGTTGATGAAGCGGTGAAGCGTCGCTCAGAGTCGCTGCAGAAACATGGGGGAAGCCGAGGCTGTGCCGTCCGACGAAAAACAAGCAGAAACCGGCATCTGTACCGCCGAGGAATCGATTGTATGGAGCCAGGAGGTGGAAGTGTGTCTTTTTCACGCAATGCTGGGACACAAACCCGTAGGAGTGAATCGACATTTCCACATGATCTGTATTCGCGATAAGTTCAGCCAGAACATCGGCAGGCAGGTGTCCTCTAAAGTCATCTGGGATCACCTGAGCACCATGTATGACATGCAGGCGCTGCATGAATCAGAAATACTCCCGTTTCCAAACTCTGAGAAGAGCTTTGTTCTGCCTGAAGAGATCATACAGGATGTCAAGGAAGGTAAAGTGGGATCTGAAGAAGACGTGAAGGAGGAGTTCAAAGAAGAAAGTGACCCACCTGCAACCCACGAAGAAGGTCTGGGTCCCAGTATGGCTGGCCAGGATTTTGCGAGGTATGGACAGAAGAAAACGTTTCGCTCTGTTCCAAAACTCCAGCTTGAGCTCAGTACAGACCAGCTCATTACCAGAGGCCTCTGTAGACAGCCTTCAGAGACCTCTGACCATGCAGCAATTGCTCCGTGAAGCTTTTGGAGAGGTCGGACAGCGGGcgcgagaaagagagacagcGGGCAGAGAGGGGGGGCTCAGGTGAGACGGGCAGCGGGTCGAAAGAATCAGCCGGggaaaagag
>XM_043225526.1
AGCCAGAGTAATGTCCGGGTGTgttgtatctgtgtgtgttgtcGTGTGTTGATGAAGCGGTGAAGCGTCGCTCAGAGTCGCTGCAGAAACATGGGGGAAGCCGAGGCTGTGCCGTCCGACGAAAAACAAGCAGAAACCGGCATCTGTACCGCCGAGGAATCGATTGTATGGAGCCAGGAGGTGGAAGTGTGTCTTTTTCACGCAATGCTGGGACACAAACCCGTAGGAGTGAATCGACATTTCCACATGATCTGTATTCGCGATAAGTTCAGCCAGAACATCGGCAGGCAGGTGTCCTCTAAAGTCATCTGGGATCACCTGAGCACCATGTATGACATGCAGGCGCTGCATGAATCAGAAATACTCCCGTTTCCAAACTCTGAGAAGAGCTTTGTTCTGCCTGAAGAGATCATACAGGATGTCAAGGAAGGTAAAGTGGGATCTGAAGAAGACGTGAAGGAGGAGTTCAAAGAAGAAAGTGACCCACCTGCAACCCACGAAGAAGGTCTGGGTCCCAGTATGGCTGGCCAGGATTTTGCGAGGCAGCAATTGCTCCGTGAAGCTTTTGGAGAGGTCGGACAGCGGGcgcgagaaagagagacagcGGGCAGAGAGGGGGGGCTCAGGTGAGACGGGCAGCGGGTCGAAAGAATCAGCCGGggaaaagag

Function

symbol description
mrgbp Predicted to be involved in histone acetylation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be located in nucleus. Predicted to be part of NuA4 histone acetyltransferase complex. Orthologous to human MRGBP (MRG domain binding protein).

NR:

description
PREDICTED: MRG/MORF4L-binding protein-like isoform X1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0043189 H4/H2A histone acetyltransferase complex cellular_component

KEGG:

id description
K11343 MRGBP; MRG-binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225522.1 True 896 mRNA 0.54 6 5444767 5449595
XM_043225523.1 False 779 mRNA 0.52 6 5444999 5449598
XM_043225524.1 False 860 mRNA 0.53 5 5444768 5449593
XM_043225525.1 False 783 mRNA 0.52 6 5444999 5449598
XM_043225526.1 False 669 mRNA 0.53 6 5444999 5449596

Neighbor

gene id symbol gene type direction distance location
eef1a2 eef1a2,LOC107724190,LOC107705720,LOC107551525,LOC107696983,LOC107693560,LOC108429306,LOC108276238 coding downstream 1234 5437518 ~ 5443533 (-)
sulf2b sulf2b,LOC107724188,LOC107693554,LOC107551524,LOC107705722,LOC108429304 coding downstream 89872 5233697 ~ 5354895 (-)
arhgap46b si:ch211-218g4.2,LOC107724193,LOC107696985,LOC107705724,LOC107693558,LOC107575029 coding downstream 211999 5170965 ~ 5232768 (-)
phf20b phf20b,LOC107696986,LOC107724192,LOC107705726,LOC107594424,LOC107575030,LOC107693555 coding downstream 275439 5153961 ~ 5169328 (-)
ndrg3b ndrg3b,ndrg3,LOC107724194,LOC107696989,LOC107705728,LOC107693556 coding downstream 291232 5114627 ~ 5153535 (-)
LOC122329287 haus8,LOC107551529,LOC107696953,LOC107663059,LOC107577736 coding upstream 7067 5456665 ~ 5460124 (-)
LOC122329290 zgc:92113,LOC107746330,LOC107554216,LOC107709233,LOC107697031,LOC107673507 coding upstream 55808 5505406 ~ 5509560 (-)
LOC122329296 LOC107673498,LOC107746338,LOC107709218,LOC107554217,LOC107696970 coding upstream 60097 5509695 ~ 5513388 (-)
LOC122329292 LOC107696963,LOC107559168,LOC107746530,LOC107707374,LOC107673558,LOC107598155 coding upstream 272890 5722488 ~ 5726263 (-)
LOC122329283 LOC107696925,LOC107724187,LOC107551517,LOC107594764,LOC107724182 coding upstream 368043 5817641 ~ 5824247 (-)
LOC122329300 NA non-coding downstream 13243 5430546 ~ 5431524 (-)
G155157 NA non-coding downstream 331803 5111844 ~ 5112964 (-)
G155156 NA non-coding downstream 347637 5096532 ~ 5097130 (-)
G155153 NA non-coding downstream 355670 5085142 ~ 5089097 (-)
G155112 cacnb3a,LOC107705735,LOC107696997,LOC107724200,LOC107601341 non-coding downstream 501750 4908918 ~ 4943017 (-)
G155238 NA non-coding upstream 75443 5525041 ~ 5547708 (-)
LOC122329299 NA non-coding upstream 204420 5654018 ~ 5662956 (-)
G155254 NA non-coding upstream 365713 5815311 ~ 5919163 (-)
G155308 NA non-coding upstream 741499 6191097 ~ 6191320 (-)
G155388 NA non-coding upstream 899409 6349007 ~ 6351825 (-)
LOC122329181 LOC107601337,LOC107697001,LOC107723119 other downstream 610247 4827478 ~ 4834520 (-)
LOC122329268 LOC107707377,LOC107673205,LOC107746501,LOC107697018,LOC107601321,LOC107598138,LOC108443130,LOC103026736,LOC106572423 other downstream 1249769 4173914 ~ 4194998 (-)
lad1 LOC107746516,LOC107696941,LOC107559160 other downstream 1538875 3894966 ~ 3905892 (-)
tspan2b tspan2b,LOC107709234,LOC107696969,LOC107746340,LOC107566064,LOC107673514,LOC107554202 other downstream 1926625 3502265 ~ 3518142 (-)
LOC122328836 LOC107566068 other downstream 1998803 3434124 ~ 3445964 (-)
G155227 si:zfos-452g4.1,LOC107724183,LOC107663057,LOC107696954,LOC107551515,LOC107705659,LOC107593949 other upstream 4819 5454417 ~ 5455047 (-)
LOC122329286 nav1b,LOC107666060,LOC107595432,LOC107740254,LOC107696445,LOC107587625 other upstream 28243 5477841 ~ 5479822 (-)
LOC122329188 LOC107709248,LOC107687290,LOC107558915,LOC107671882,LOC107572785,LOC107723742,LOC107701749,LOC107549048,LOC107756350 other upstream 34614 5484212 ~ 5496474 (-)
G155489 LOC107681366,LOC107727023,LOC107705691 other upstream 1281253 6730851 ~ 6731886 (-)
rps21 rps21,LOC107666483,LOC107681394,LOC106572905 other upstream 1317010 6766608 ~ 6823032 (-)

Expression


Co-expression Network