lad1 (LOC107746516,LOC107696941,LOC107559160)


Basic Information

Item Value
gene id lad1
gene name LOC107746516,LOC107696941,LOC107559160
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 3894966 ~ 3905892 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225532.1
TCTCGCGAAGGTGCGGGGTAAAGGTGGCACGCAGACACGGGGAAGCGCGAGACACGTTACACACCTCCACAGACCTCTCTCCAACAGACTTCACCACAGCTACACCAAAACCATGTCTATTAGCCGGAAAAACTGGTCGGCTTTGTCAACGCTGACTCGGCAGTGGACTgtggaggatgaggaagaggtggagagagagaagaggaggaagaccAGGGAGTCTACAGCAGACACGGATGAAAGTCCCTCTCAAGAGGCCGAACTACAAACCAGTAGCGGGTCAGCCGATGCTGGAGACTCCGGTGGCGGTGCGGAGCAGCTGCAGATGGACTTTGTGGAGATGCTGCGAGTCCGTGATGAACGGAGGAGGATGAGGCACGTTGAAACCCTGAGGAAGAATAAGGAGGAAGACGACGGAGGTAAAGAGGCCGGTCCGGATGCGGAGCCCCACGTGGAGCTGCTGGGAGAACAGCAGGACGGGGAACGCTTCAAGAACATCCAGAGCTGCGTGGAGAGCTTCCTGTCAGCAGAGCCTCCCGCCAGCTCCAGAGACTCGGAGACACGCCAGAAGCATGAAAATGGAGGCACGAACCAAGATTCAACATCAACAAACTCTCAACCCCCCTCGAAAGCATCCAGAAAGTTTGTGAGctctctctccatctccttTGATAAGAGTCCCACATCACCCTCAACAACCAGCAGACTGGTTTCTCCTCTGAGCCCCAGGTCTCCGCCCCCTCACGCCCCGGGGGCGGGGTCACCAGTCAGCCCCGCCCACTCCGTCTCTATGAGCCCCACACCGAACGGAGACGCAGCGAGGCATGAAAACGGGTCACCGAGCAATTTCGGAGCAGCCGAGAAACCTGCGTTCACGCGGCAGAGCTCCAGAACGGTGTCCTTCAGGATGATGAAGAGGAAGGAGGAAGAAAACATGCCGCTGCAGAGAAGTGCAAGTGTGCGGATTGCAGCCAAGACTTTTGAATCTAATAAGGAGGAGCAGCAGAGCCCGTTTCAGAGAAACTCCCGCCAGAGGTTATCATCTCGCTCCATTCAGGAGAAAATGGAGCGACTGGCTCAAGCCTCACAGAAATGGGAGATATCCAAATCGGCCGTGGTGCACCAGAGCGTGTGTTTAGCGGACGAGGTGTCCAGGAAGAGGGAGCTGTTTGAGAAAGAGCAGGAGGGATCCGACCGCAGCCATGTCTTCTCCAAACAGGAATTTCGCAGCTTTTCTGCGGGAATCTCTGATCGAATTAATCGCTGGGTTcagaagaaaacattaaacGTGTCGTCGTCATCATCCTCGTCAGCATCTTCGTCCTCTCATAGTCCTTTGGATCTGAGACTTGTGAACATCTCCAGTAAGAAAAGTGTGTTTGAAAGAGGACAAGACCAGGACCACAAGTGACACTCCAAGACAAACACAAAgtttaatgAGATTGATTTGATCACGCTTCAGCTCGATCGACTCTTTCAGACAGTCAGGGCCAAGGATTGTCTCTAAACTCTTCTTCCTTCTGCTTCCTTCCGACGGCTAATTCCTCAGCACTTTTAAGGCGTAGTACTTTATTTGGGTAAATCGAAGGCTTCTGTTATTGGTTGTGGATGCGTATACTAATGGACTGCGGGTCTTCACACACTAACTGAACATCACGGGGTTTATCTGACAGCAGGAacacctcctcttcctcacagCTTGACGTTTGTGCCGTTGATAAGTAAGTTATTAGGAGAAAGAGGCATAATCTATGACCGGAGCCATAACTCATAACGGTCCAAGGTACAACTGTAATATCAGCAATGTGTGTTTGGATGAACCTACAGGAAATAAAGCTCAGTGACTGATTTGTACTGAAGCTGGAACGGACCTGTGCTCTTGCTGCTGTTGTCTCAACTTGTCATAATGAGGAAACCTAATCTATGGAGAAATGTGTCCCATCAAGCCCTTTGAAAACTGACTTCAATCCATTCCAGTTCAACCAAGCTTgtgcttccttttttttttttgctaaccGACCTGTCATGTAATTATCTTTTCTGCCCAGAAGGGTTATGCtgtagattaataaaaaaaaattattttt
>XM_043225533.1
TCTCGCGAAGGTGCGGGGTAAAGGTGGCACGCAGACACGGGGAAGCGCGAGACACGTTACACACCTCCACAGACCTCTCTCCAACAGACTTCACCACAGCTACACCAAAACCATGTCTATTAGCCGGAAAAACTGGTCGGCTTTGTCAACGCTGACTCGGCAGTGGACTgtggaggatgaggaagaggtggagagagagaagaggaggaagaccAGGGAGTCTACAGCAGACACGGATGAAAGTCCCTCTCAAGAGGCCGAACTACAAACCAGTAGCGGGTCAGCCGATGCTGGAGACTCCGGTGGCGGTGCGGAGCAGCTGCAGATGGACTTTGTGGAGATGCTGCGAGTCCGTGATGAACGGAGGAGGATGAGGCACGTTGAAACCCTGAGGAAGAATAAGGAGGAAGACGACGGAGGTAAAGAGGCCGGTCCGGATGCGGAGCCCCACGTGGAGCTGCTGGGAGAACAGCAGGACGGGGAACGCTTCAAGAACATCCAGAGCTGCGTGGAGAGCTTCCTGTCAGCAGAGCCTCCCGCCAGCTCCAGAGACTCGGAGACACGCCAGAAGCATGAAAATGGAGGCACGAACCAAGATTCAACATCAACAAACTCTCAACCCCCCTCGAAAGCATCCAGAAAGTTTGTGAGctctctctccatctccttTGATAAGAGTCCCACATCACCCTCAACAACCAGCAGACTGGTTTCTCCTCTGAGCCCCAGGTCTCCGCCCCCTCACGCCCCGGGGGCGGGGTCACCAGTCAGCCCCGCCCACTCCGTCTCTATGAGCCCCACACCGAACGGAGACGCAGCGAGGCATGAAAACGGGTCACCGAGCAATTTCGGAGCAGCCGAGAAACCTGCGTTCACGCGGCAGAGCTCCAGAACGGTGTCCTTCAGGATGATGAAGAGGAAGGAGGAAGAAAACATGCCGCTGCAGAGAAGTGCAAGTGTGCGGATTGCAGCCAAGACTTTTGAATCTAATAAGGAGGAGCAGCAGAGCCCGTTTCAGAGAAACTCCCGCCAGAGGTTATCATCTCGCTCCATTCAGGAGAAAATGGAGCGACTGGCTCAAGCCTCACAGAAATGGGAGATATCCAAATCGGCCGTGGTGCACCAGAGCGTGTGTTTAGCGGACGAGGTGTCCAGGAAGAGGGAGCTGTTTGAGAAAGAGCAGGAGGGATCCGACCGCAGCCATGTCTTCTCCAAACAGGATCTGAGACTTGTGAACATCTCCAGTAAGAAAAGTGTGTTTGAAAGAGGACAAGACCAGGACCACAAGTGACACTCCAAGACAAACACAAAgtttaatgAGATTGATTTGATCACGCTTCAGCTCGATCGACTCTTTCAGACAGTCAGGGCCAAGGATTGTCTCTAAACTCTTCTTCCTTCTGCTTCCTTCCGACGGCTAATTCCTCAGCACTTTTAAGGCGTAGTACTTTATTTGGGTAAATCGAAGGCTTCTGTTATTGGTTGTGGATGCGTATACTAATGGACTGCGGGTCTTCACACACTAACTGAACATCACGGGGTTTATCTGACAGCAGGAacacctcctcttcctcacagCTTGACGTTTGTGCCGTTGATAAGTAAGTTATTAGGAGAAAGAGGCATAATCTATGACCGGAGCCATAACTCATAACGGTCCAAGGTACAACTGTAATATCAGCAATGTGTGTTTGGATGAACCTACAGGAAATAAAGCTCAGTGACTGATTTGTACTGAAGCTGGAACGGACCTGTGCTCTTGCTGCTGTTGTCTCAACTTGTCATAATGAGGAAACCTAATCTATGGAGAAATGTGTCCCATCAAGCCCTTTGAAAACTGACTTCAATCCATTCCAGTTCAACCAAGCTTgtgcttccttttttttttttgctaaccGACCTGTCATGTAATTATCTTTTCTGCCCAGAAGGGTTATGCtgtagattaataaaaaaaaattattttt
>XR_006247897.1
TCTCGCGAAGGTGCGGGGTAAAGGTGGCACGCAGACACGGGGAAGCGCGAGACACGTTACACACCTCCACAGACCTCTCTCCAACAGACTTCACCACAGCTACACCAAAACCATGTCTATTAGCCGGAAAAACTGGTCGGCTTTGTCAACGCTGACTCGGCAGTGGACTgtggaggatgaggaagaggtggagagagagaagaggaggaagaccAGGGAGTCTACAGCAGACACGGATGAAAGTCCCTCTCAAGAGGCCGAACTACAAACCAGTAGCGGGTCAGCCGATGCTGGAGACTCCGGTGGCGGTGCGGAGCAGCTGCAGATGGACTTTGTGGAGATGCTGCGAGTCCGTGATGAACGGAGGAGGATGAGGCACGTTGAAACCCTGAGGAAGAATAAGGAGGAAGACGACGGAGGTAAAGAGGCCGGTCCGGATGCGGAGCCCCACGTGGAGCTGCTGGGAGAACAGCAGGACGGGGAACGCTTCAAGAACATCCAGAGCTGCGTGGAGAGCTTCCTGTCAGCAGAGCCTCCCGCCAGCTCCAGAGACTCGGAGACACGCCAGAAGCATGAAAATGGAGGCACGAACCAAGATTCAACATCAACAAACTCTCAACCCCCCTCGAAAGCATCCAGAAAGTTTGTGAGctctctctccatctccttTGATAAGAGTCCCACATCACCCTCAACAACCAGCAGACTGGTTTCTCCTCTGAGCCCCAGGTCTCCGCCCCCTCACGCCCCGGGGGCGGGGTCACCAGTCAGCCCCGCCCACTCCGTCTCTATGAGCCCCACACCGAACGGAGACGCAGCGAGGCATGAAAACGGGTCACCGAGCAATTTCGGAGCAGCCGAGAAACCTGCGTTCACGCGGCAGAGCTCCAGAACGGTGTCCTTCAGGATGATGAAGAGGAAGGAGGAAGAAAACATGCCGCTGCAGAGAAGTGCAAGTGTGCGGATTGCAGCCAAGACTTTTGAATCTAATAAGGAGGAGCAGCAGAGCCCGTTTCAGAGAAACTCCCGCCAGAGGTTATCATCTCGCTCCATTCAGGAGAAAATGGAGCGACTGGCTCAAGCCTCACAGAAATGGGAGATATCCAAATCGGCCGTGGTGCACCAGAGCGTGTGTTTAGCGGACGAGGTGTCCAGGAAGAGGGAGCTGTTTGAGAAAGAGCAGGAGGGATCCGACCGCAGCCATGTCTTCTCCAAACAGGAATTTCGCAGCTTTTCTGCGGGAATCTCTGATCGAATTAATCGCTGGGTTcagaagaaaacattaaacGTGTCGTCGTCATCATCCTCGTCAGCATCTTCGTCCTCTCATAGTCCTTTGGATCTGAGACTTGTGAACATCTCCAGTAAGAAAAGTGTGTTTGAAAGAGGACAAGACCAGGACCACAAGTGACACTCCAAGACAAACACAAAgtttaatgAGATTGATTTGATCACGCTTCAGCTCGATCGACTCTTTCAGACAGTCAGGGCCAAGGATTGTCTCTAAACTCTTCTTCCTTCTGCTTCCTTCCGACGGCTAATTCCTCAGCACTTTTAAGGCGTAGTACTTTATTTGGGTAAATCGAAGGCTTCTGTTATTGGTTGTGGATGCGTATACTAATGGACTGCGGGTCTTCACACACTAACTGAACATCACGGGGTTTATCTGACAGCAGGAacacctcctcttcctcacagCTTGACGTTTGTGCCGTTGATAAGAAATAAAGCTCAGTGACTGATTTGTACTGAAGCTGGAACGGACCTGTGCTCTTGCTGCTGTTGTCTCAACTTGTCATAATGAGGAAACCTAATCTATGGAGAAATGTGTCCCATCAAGCCCTTTGAAAACTGACTTCAATCCATTCCAGTTCAACCAAGCTTgtgcttccttttttttttttgctaaccGACCTGTCATGTAATTATCTTTTCTGCCCAGAAGGGTTATGCtgtagattaataaaaaaaaattattttt

Function

NR:

description
PREDICTED: ladinin-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225532.1 True 2087 mRNA 0.51 14 3894966 3905892
XM_043225533.1 False 1967 mRNA 0.51 13 3894966 3905892
XR_006247897.1 False 1981 transcript 0.51 15 3894966 3905892

Neighbor

gene id symbol gene type direction distance location
tnnt2a tnnt2a,LOC107559170,LOC107696942 coding downstream 1290 3882020 ~ 3893676 (-)
LOC122329314 lgr6,LOC107746507,LOC107559174,LOC107697027,LOC107707372,LOC107673397 coding downstream 124103 3701606 ~ 3770863 (-)
etv7 LOC107559164,LOC107696965,LOC107746509,LOC107673543,LOC107707376,LOC107598153 coding downstream 206768 3682092 ~ 3688198 (-)
pnpla1 LOC107696946,LOC107559157,LOC107746525 coding downstream 213007 3674465 ~ 3681959 (-)
ngfa ngfa,LOC107709229,LOC107554210,LOC107673522,LOC107566067,LOC107696968,LOC107735269 coding downstream 340453 3529533 ~ 3554513 (-)
tnni1a tnni1a,LOC107598157,LOC107746527,LOC107673122,LOC107696961,LOC103149619 coding upstream 1370 3907262 ~ 3913491 (-)
phlda3 phlda3,LOC107673137,LOC107598124,LOC107746504,LOC107697022,LOC107559178 coding upstream 11886 3917778 ~ 3919822 (-)
csrp1a csrp1a,csrp1,LOC107697020,LOC107559179,LOC107673143,LOC107707378,LOC100304834 coding upstream 16592 3922484 ~ 3927906 (-)
bmp7b bmp7b,bmp7,LOC107750885,LOC107565994,LOC107673428,LOC107696936 coding upstream 303422 4209314 ~ 4247138 (-)
mipb mipb,LOC107565996,LOC107705750 coding upstream 382378 4288270 ~ 4289469 (-)
G154724 NA non-coding downstream 27125 3867282 ~ 3867841 (-)
G154723 NA non-coding downstream 36296 3855066 ~ 3858670 (-)
G154720 NA non-coding downstream 56833 3837662 ~ 3838133 (-)
G154708 NA non-coding downstream 67776 3826827 ~ 3827190 (-)
G154703 NA non-coding downstream 88065 3806543 ~ 3806901 (-)
G154763 NA non-coding upstream 31459 3937351 ~ 3937638 (-)
G154764 NA non-coding upstream 32681 3938573 ~ 3939050 (-)
G154783 NA non-coding upstream 144398 4050290 ~ 4050580 (-)
G154789 NA non-coding upstream 157631 4063523 ~ 4064880 (-)
G154787 NA non-coding upstream 158073 4063965 ~ 4065529 (-)
tspan2b tspan2b,LOC107709234,LOC107696969,LOC107746340,LOC107566064,LOC107673514,LOC107554202 other downstream 376824 3502265 ~ 3518142 (-)
LOC122328836 LOC107566068 other downstream 449002 3434124 ~ 3445964 (-)
G154446 NA other downstream 937694 2925048 ~ 2957272 (-)
G154445 NA other downstream 943338 2925305 ~ 2951628 (-)
si:zfos-905g2.1 si:zfos-905g2.1 other downstream 1020208 2869618 ~ 2874758 (-)
LOC122329268 LOC107707377,LOC107673205,LOC107746501,LOC107697018,LOC107601321,LOC107598138,LOC108443130,LOC103026736,LOC106572423 other upstream 268022 4173914 ~ 4194998 (-)
LOC122329181 LOC107601337,LOC107697001,LOC107723119 other upstream 921586 4827478 ~ 4834520 (-)
G155227 si:zfos-452g4.1,LOC107724183,LOC107663057,LOC107696954,LOC107551515,LOC107705659,LOC107593949 other upstream 1548525 5454417 ~ 5455047 (-)
LOC122329286 nav1b,LOC107666060,LOC107595432,LOC107740254,LOC107696445,LOC107587625 other upstream 1571949 5477841 ~ 5479822 (-)
LOC122329188 LOC107709248,LOC107687290,LOC107558915,LOC107671882,LOC107572785,LOC107723742,LOC107701749,LOC107549048,LOC107756350 other upstream 1578320 5484212 ~ 5496474 (-)

Expression


Co-expression Network