LOC122328389


Basic Information

Item Value
gene id LOC122328389
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10291465 ~ 10294043 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247790.1
TTTCTTTGTTACCATACAGATTGTCAGGGACAGGAAGCATCAACTGGTCCGACAATAGTTATGACAACATTGCCGGAAAAAAAAATCGGCTACAGACCTGACAACAGCAAAGGGGGAAAAGCTGGTAACAGACCCGGCAGTAAACCTGGCAACAGATCCGGCATCCAACCTGGCAACAGATCCAGCAGCTGCAAATCCAACTCCTGTACAAGAAATTGGCATGGGACAATCAGATCCCGTTCACACTACTGACATGGCACATGGATTAGTTCCCAGCGCTGCTAAGACCAGTCTGCCTACATCTGTACCAGAAGAATCAAAAAAATCTGCTGACCTCTACTGAAAAGGTGTTacaagaaatacagaaaaatgtaaatCTAGGTAAAGAGAATGAGAAGAGAGTGATGCCTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247790.1 True 413 lncRNA 0.45 3 10291465 10294043

Neighbor

gene id symbol gene type direction distance location
LOC122328770 pifo coding downstream 10926 10243928 ~ 10280539 (-)
rnf41 rnf41,LOC107723732,LOC107756409 coding downstream 79038 10204039 ~ 10212427 (-)
dgkaa dgkaa,dgka,LOC107549042,LOC107671885,LOC107701752,LOC107594021,LOC107756407 coding downstream 88658 10177186 ~ 10202807 (-)
tamalin grasp,LOC107723769,LOC107594022,LOC107549045,LOC107671830 coding downstream 115423 10162782 ~ 10176042 (-)
nr4a1 nr4a1,LOC107671891,LOC107723761,LOC107572787,LOC107756405,LOC107701750,LOC107549046 coding downstream 146013 10140150 ~ 10145452 (-)
LOC122328780 NA coding upstream 49207 10343250 ~ 10346092 (-)
LOC122328599 LOC107570968,LOC107656538,LOC107708815,LOC107756373,LOC107701716,LOC107586510 coding upstream 138721 10432764 ~ 10447218 (-)
LOC122329230 dnajc11a,LOC107708818,LOC107701714,LOC107756372,LOC107586512,LOC107656549,LOC108433830 coding upstream 155442 10449485 ~ 10456918 (-)
LOC122328445 zgc:173570,LOC107657062,LOC107559474,LOC107747974 coding upstream 222673 10516716 ~ 10521072 (-)
LOC122328446 LOC107707743,LOC107671949,LOC107657006,LOC107603135,LOC107559475 coding upstream 228055 10522098 ~ 10525372 (-)
G156313 NA non-coding downstream 174510 10112617 ~ 10116955 (-)
G156283 NA non-coding downstream 232162 10058011 ~ 10059303 (-)
G156278 NA non-coding downstream 237916 10052526 ~ 10053549 (-)
G156264 NA non-coding downstream 274044 10016456 ~ 10017421 (-)
G156261 NA non-coding downstream 339434 9951143 ~ 9952031 (-)
G156341 NA non-coding upstream 54098 10348141 ~ 10351881 (-)
G156364 NA non-coding upstream 92911 10386954 ~ 10388615 (-)
G156452 NA non-coding upstream 246856 10540899 ~ 10542887 (-)
G156459 NA non-coding upstream 373914 10667957 ~ 10675579 (-)
G156468 NA non-coding upstream 402409 10696452 ~ 10696677 (-)
zgc:153284 LOC107701733,LOC107571300,LOC107756391,LOC107549061,LOC107708783 other downstream 457783 9831809 ~ 9833682 (-)
hmgn3 hmgn3,LOC107756386,LOC107671890 other downstream 483096 9801785 ~ 9808369 (-)
ccdc187 LOC107708822,LOC107570908,LOC107718813,LOC107656553,LOC107695760,LOC107586514 other downstream 1081501 9195310 ~ 9209964 (-)
ctnnbip1 ctnnbip1 other downstream 1194163 9079532 ~ 9097302 (-)
sst6 LOC107681964,LOC107571825,LOC107695779,LOC107570713,LOC107681961 other downstream 1364714 8921564 ~ 8926751 (-)
LOC122329224 NA other upstream 61898 10355941 ~ 10359786 (-)
LOC122328779 taf8,LOC107723763,LOC107756368,LOC107549030,LOC107671856,LOC107594013,LOC107701755 other upstream 69862 10363905 ~ 10367369 (-)
LOC122328798 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other upstream 381637 10675680 ~ 10678150 (-)
G156746 NA other upstream 806701 11100744 ~ 11105223 (-)
LOC122328546 rpl10 other upstream 1447357 11741400 ~ 11746620 (-)

Expression


Co-expression Network