LOC122328560


Basic Information

Item Value
gene id LOC122328560
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 575989 ~ 576834 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247809.1
TATTACCCGCTACCTGCTTCCCGCTACCTGCTTCCCGCTACCTGCTACCTGCTATCTGCTAcctgctacctgctatctacTACTGATCCCTGTGATTGTGATTTGTGTTActggttattattgtttgtttttgttttgtttaaagtggtTCTGCTTGAGGGCATCTATTTGATTATGGAGTAGCCGGTGCCCTGTGTGGATTTTGCTCCTCCATTGTGGAActacaaaaattgtattctttttctttccttttttataatttgtgtattttttgttttgttggacattttgtattgtttatattcaacattagtTTGCCTtggttgaatttgtttgttcgtttccctttcctttttcttgTGACATTATTGCCTGGATTAGTGTGTAAGGTTTTGGTTTGTGTAATACACATTGcatatactcattttatttttatcttcttacAGGAGCTGGGGTTCCACGGGTGCAGGAGCTTGAGGTGGTGGTGTCACTTCATCATTTGCTGTGGacacgtttgtgtgtgcagtgagtgtgtcggggtgtgtgtgtgtgtgtgtggaggtgtaAGTGTGCTTTTGGCTAAATTCAGCACTGGTGATCACTCCCGTGGGTGACCTCAGCCCTTTACCATTGGAGAGTGCTGCCGGCAGTAGGTGATGAGGATtcaatgtgacttttaaatggtgaaacaattgtgaaaataaattttgtacttTCATGCTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247809.1 True 725 lncRNA 0.41 2 575989 576834

Neighbor

gene id symbol gene type direction distance location
LOC122329137 NA coding downstream 265412 308363 ~ 310577 (-)
LOC122329136 NA coding downstream 309957 258605 ~ 266032 (-)
tnnc1a tnnc1a,LOC108427795,LOC107684904,LOC107736944,LOC100708228,LOC107566179,LOC107568483,LOC103385538 coding upstream 232090 808924 ~ 834581 (-)
raf1a raf1a,LOC107713759,LOC107684881,LOC108427788 coding upstream 306358 883192 ~ 895323 (-)
gp9 LOC107736950,LOC107675164,LOC107564798 coding upstream 326674 903508 ~ 905461 (-)
LOC122329272 LOC107736949,LOC107675168,LOC107564797,LOC107555789,LOC107684883,LOC108181449,LOC107713762,LOC107684884,LOC107555806 coding upstream 328777 905611 ~ 958991 (-)
nup210 nup210,LOC107684885,LOC107555788,LOC107675171,LOC107736952,LOC107564796,LOC107713743 coding upstream 388840 965674 ~ 991444 (-)
G153753 NA non-coding downstream 212751 361649 ~ 363238 (-)
LOC122328463 NA non-coding downstream 255363 320273 ~ 320626 (-)
G153750 NA non-coding downstream 299181 276168 ~ 276808 (-)
G153749 NA non-coding downstream 307808 267916 ~ 268181 (-)
LOC122328559 NA non-coding upstream 6309 583143 ~ 584491 (-)
G153760 NA non-coding upstream 102200 679034 ~ 683111 (-)
G153911 NA non-coding upstream 193679 770513 ~ 776050 (-)
G153893 cnbp non-coding upstream 264885 841719 ~ 899766 (-)
LOC122328476 NA non-coding upstream 383440 960274 ~ 963577 (-)
ndnl2 ndnl2,LOC107736943,LOC107568481,LOC107714263,LOC107660884 other upstream 202251 779085 ~ 785879 (-)
vgll4a LOC107675174,LOC107736947,LOC107713758,LOC107684880,LOC107555803,LOC107574679 other upstream 288643 865477 ~ 882184 (-)
l3mbtl1 l3mbtl1,LOC107736954,LOC107564793,LOC107684891,LOC107675169 other upstream 476543 1053377 ~ 1064774 (-)
smim29 si:dkey-226k3.4,LOC107690111,LOC107567962,LOC107724208,LOC107738791,LOC107678078,LOC107571229 other upstream 930864 1507698 ~ 1512329 (-)
LOC122328833 LOC107669693 other upstream 1525876 2102710 ~ 2116883 (-)

Expression


Co-expression Network