LOC122329331


Basic Information

Item Value
gene id LOC122329331
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14054364 ~ 14054500 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247901.1
CTAGCCCTGAATGAAGGCCCCCAGCTTGGCGTAGCTGTTGGTTTCAAGCAGCGGCTGATATAAAAGTCTTCTTATGGTCTGTTGACTTTCCTAGTGTTATCTAATGGGTAAAGTCGTTTCAGTTCAAAGAAACAGTT

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome
ko03013 Nucleocytoplasmic transport

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247901.1 True 137 snoRNA 0.44 1 14054364 14054500

Neighbor

gene id symbol gene type direction distance location
mlh3 LOC107673081,LOC107591079,LOC107737666,LOC107687437 coding upstream 3836 14044783 ~ 14050528 (+)
szrd1 szrd1,LOC107673108,LOC107716129,LOC107687433,LOC107737539,LOC107591082 coding upstream 41485 14008220 ~ 14012879 (+)
clcnk clcnk,LOC107737667,LOC107716123,LOC107687482,LOC107593941 coding upstream 142614 13905088 ~ 13911750 (+)
LOC122328345 LOC107591092,LOC107673087,LOC107737549,LOC107716117,LOC101883939,LOC107593944 coding upstream 222919 13824959 ~ 13831445 (+)
ttll10 LOC107591093,LOC107716116,LOC107593935,LOC107687423 coding upstream 229827 13804114 ~ 13824537 (+)
LOC122329330 NA coding downstream 2185 14056685 ~ 14056821 (+)
nckap5l LOC107737531,LOC107673071,LOC107716135,LOC107591078,LOC107687440,LOC107593921 coding downstream 3470 14057970 ~ 14085170 (+)
olfml3a olfml3a,LOC107673069,LOC107737697,LOC107593917,LOC107687444,LOC107716140,LOC107591119 coding downstream 87384 14141884 ~ 14149209 (+)
klhl21 klhl21,LOC107687446,LOC107593916,LOC107716146,LOC107591074,LOC107673096,LOC107737529 coding downstream 163007 14217507 ~ 14225401 (+)
nol9 nol9,LOC107591073,LOC107737527,LOC107687449,LOC107716145,LOC107593915,LOC107673104 coding downstream 178601 14233101 ~ 14239250 (+)
G157481 NA non-coding upstream 14165 13981975 ~ 14040199 (+)
G157479 NA non-coding upstream 98818 13955112 ~ 13955546 (+)
G157476 LOC107591085,LOC107673100,LOC107737541,LOC107687430,LOC107593930,LOC107716125 non-coding upstream 100892 13944085 ~ 13953472 (+)
G157475 LOC107737541,LOC107591085,LOC107673100,LOC107593930,LOC107716125,LOC107687430 non-coding upstream 110445 13943589 ~ 13943919 (+)
G157474 NA non-coding upstream 111932 13942021 ~ 13942432 (+)
G157496 NA non-coding downstream 31094 14085594 ~ 14087258 (+)
G157494 NA non-coding downstream 33081 14087581 ~ 14088519 (+)
G157521 NA non-coding downstream 92910 14147410 ~ 14147616 (+)
G157531 NA non-coding downstream 141931 14196431 ~ 14196696 (+)
LOC122328961 NA non-coding downstream 210164 14264664 ~ 14273735 (+)
LOC122328708 LOC107737579,LOC107672049,LOC107565833,LOC107712694,LOC107687392,LOC566587,LOC107593419 other upstream 1802382 12246193 ~ 12251982 (+)
kctd6b kctd6b,rpl10,rl10,LOC107671957,LOC107570288,LOC107737715,LOC107560935,LOC108436290,LOC103399204,LOC107672042 other upstream 2307794 11697414 ~ 11746570 (+)
LOC122328549 smim4,LOC107560937,LOC107671967,LOC107737614,LOC107712735,LOC107699582,LOC107570283 other upstream 2322003 11730980 ~ 11732361 (+)
G156586 NA other upstream 2877331 11174421 ~ 11177033 (+)
LOC122328437 LOC107737657,LOC107560901,LOC107671993,LOC108435244,LOC108275530 other upstream 2968760 11077154 ~ 11085604 (+)
c1qtnf12 fam132a,LOC107591142,LOC107716139,LOC107593919,LOC107687484 other downstream 39578 14094078 ~ 14126201 (+)
si:dkey-151g10.3 LOC107737519,LOC107716153,LOC107593909,LOC107668334,LOC107673054 other downstream 245201 14299701 ~ 14343274 (+)
pkig pkig,LOC107737509,LOC107673080,LOC107574720,LOC107564651 other downstream 549293 14603793 ~ 14636817 (+)
itih6 LOC107737505,LOC107673092,LOC107574689,LOC107695841,LOC107716181,LOC107564649 other downstream 555029 14609529 ~ 15153978 (+)
LOC122328906 LOC107673074,LOC107737500,LOC107695835,LOC107716175,LOC107574686,LOC107564653,LOC107576192 other downstream 626360 14680860 ~ 14686618 (+)

Expression


Co-expression Network