LOC122331567


Basic Information

Item Value
gene id LOC122331567
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 73544 ~ 309909 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU22968
AGAAGATTAGTTTCACCGCGCTCTCTGGTGTTTCGTCGTGGTTCTGGTTTAGTACAAACGAGTAGAAAAGCCGTTTCTGTAAACGGAGAAATGGTTTCTGCATCAGGTGTATAAATGCCTGTAATAATATTCTCATTCACTACGTTTTGAAGCAAGCAGGAATATCTGGAGTATCATCTGAACTGAGATCTTCTGCTTTGAAGATGATGTttgttaaagaggagagtgagagAACATGATTGAACCAGAaacatggagaataaaacaagaagaacCAGAAACACTGAAGATAAAACACGAGGAagcagaaacctggagaacAAAACAGGAGGAACAAGGAGGAACACTTTTGATGAAAGTGAAAGAGGAGAGACCAGATCTGAATGAAGTGCAGGAGAAACCTGAAGACACTGGAGAAACATCAGAGAGCTGCAGCATTCAGAAAGCAGACGTCAAAaggcctttcagctgctctcagtgcggaaagagttttAGACAGAGAGCAAGCGTTAAGAATCACATGTTAATTCACGCCGGAATAaaacctttcagctgctctcagtgtggaaacACCTTCACGTGTAAAGCAAACCTTGAGAAGCACATGTTAATTCACGCCGGGATaaagcctttcagctgctcGGAGTGTGGGAAGGGTTTCACAAGTAAAGATACCTTAAGACTCACATGTCCATTCATAGGCGGAATAAAGCCTTTTATTTGCTCTCAGTGCGGGAAGGGTTTCATATCGAAAGGAATCCTGAGGGATCACGTGTTAATTCATACTGGGATAAAACCCTTCAGCTGCTCCgaatgtggaaagagttttacacACAAATCAAGCCTTAAGAATCACATGTTCATTCATACTGGGAAAAGGCCTTTCTcctgctctcagtgcggaaagGGTTTCAGAGATAAAGCAAACCTTAAGGACCACATGTTCATTCATTCTGGGATAaaacctttcagctgctctgagTGCGGAAAGACTTTCACTCAGAAAGGACAACTTAAGATTCATCTTGTAACTCACTCCTCGGAAAAgtctttcagctgctctcagtgcgggaagagctttaaatataaatcaaaccTTCAGAGGC
>TU22969
AGAAGATTAGTTTCACCGCGCTCTCTGGTGTTTCGTCGTGGTTCTGGTTTAGTACAAACGAGTAGAAAAGCCGTTTCTGTAAACGGAGAAATGGTTTCTGCATCAGGTGTATAAATGCCTGTAATAATATTCTCATTCACTAAGTTTTGAAGCAAGCAGGAATATCTGGAGGAGTATCATCTGAACTGAGATCTTCTGCTTTGAAGATGATGTttgttaaagaggagagtgaggaGAACATGATTGAACCAGAaacatggagaataaaacacGAAGAACCAGAAACATTGAAGATAAAACACGAGGA
>XM_043229099.1
TGAACTGAGATCTTCTGCTTTGAAGATGATGTttgttaaagaggagagtgagagAACATGATTGAACCAGAaacatggagaataaaacaagaagaacCAGAAACACTGAAGATAAAACACGAGGAagcagaaacctggagaacAAAACAGGAGGAACAAGGAGGAACACTTTTGATGAAAGTGAAAGAGGAGAGACCAGATCTGAATGAAGTGCAGGAGAAACCTGAAGACACTGGAGAAACATCAGAGAGCTGCAGCATTCAGAAAGCAGACGTCAAAaggcctttcagctgctctcagtgcggaaagagttttAGACAGAGAGCAAGCGTTAAGAATCACATGTTAATTCACGCCGGAATAaaacctttcagctgctctcagtgtggaaacACCTTCACGTGTAAAGCAAACCTTGAGAAGCACATGTTAATTCACGCCGGGATaaagcctttcagctgctcGGAGTGTGGGAAGGGTTTCACAAGTAAAGATACCTTAAGACTCACATGTCCATTCATAGGCGGAATAAAGCCTTTTATTTGCTCTCAGTGCGGGAAGGGTTTCATATCGAAAGGAATCCTGAGGGATCACGTGTTAATTCATACTGGGATAAAACCCTTCAGCTGCTCCgaatgtggaaagagttttacacACAAATCAAGCCTTAAGAATCACATGTTCATTCATACTGGGAAAAGGCCTTTCTcctgctctcagtgcggaaagGGTTTCAGAGATAAAGCAAACCTTAAGGACCACATGTTCATTCATTCTGGGATAaaacctttcagctgctctgagTGCGGAAAGACTTTCACTCAGAAAGGACAACTTAAGATTCATCTTGTAACTCACTCCTCGGAAAAgtctttcagctgctctcagtgcgggaagagctttaaatataaatcaaaccTTCAGAGGCTGCGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22968 True 1106 TUCP 0.55 2 73544 75634
TU22969 False 307 lncRNA 0.39 2 73544 309909
XM_043229099.1 False 936 mRNA 0.43 2 73722 75642

Neighbor

gene id symbol gene type direction distance location
LOC122331645 LOC107736793 coding upstream 59388 7079 ~ 14156 (+)
LOC122331907 NA coding downstream 140562 450471 ~ 452874 (+)
LOC122332242 NA coding downstream 259415 569324 ~ 571953 (+)
LOC122329695 LOC107574151,LOC107661760,LOC107705958,LOC107574149,LOC107712638,LOC107575271 coding downstream 262029 571938 ~ 610361 (+)
LOC122332267 NA coding downstream 328919 638828 ~ 639299 (+)
LOC122329668 NA coding downstream 389806 699715 ~ 711401 (+)
G15468 NA non-coding upstream 5847 62702 ~ 67697 (+)
LOC122331513 NA non-coding upstream 34448 37899 ~ 39096 (+)
G15520 NA non-coding downstream 11446 321355 ~ 354219 (+)
G15524 NA non-coding downstream 42055 351964 ~ 353083 (+)
G15527 NA non-coding downstream 52010 361919 ~ 367951 (+)
G15507 NA non-coding downstream 111626 421535 ~ 422898 (+)
LOC122330779 NA non-coding downstream 144857 454766 ~ 456666 (+)
G15563 NA other downstream 243789 553698 ~ 557081 (+)
LOC122330407 NA other downstream 315455 625364 ~ 636239 (+)
LOC122330463 NA other downstream 444521 754430 ~ 775534 (+)
LOC122330135 NA other downstream 696074 1005983 ~ 1009431 (+)
LOC122330066 NA other downstream 737103 1047012 ~ 1051151 (+)

Expression


Co-expression Network