LOC122330711


Basic Information

Item Value
gene id LOC122330711
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 695751 ~ 697709 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU23041
TGATGTCTGACACTGACTGACTCGAGAAAGGCTTCAAGACACTCATCTCTTCTTTCGCAGCATCACCACCAACAGACTGAAATCAAATCCTGTCGTGAACGTGTCTGTAAGAATCAGACAGGAGCCTCCTCTTCTGAAGATGAAACGAGAGCCGCTGCACAAATCTGTcgtaaaataatcaaataaacagcGTTTAAGTGAAGCAACATGAGTTTTGATCATTCCTCCACCATGTCCCAGCCTTTAGTAGAAGTTTGTCTTGAATGGATATCGTGGATGGATATCAGGCTCTGATCTATGATTATAACATCAGGGATATACTGGTTTGGAGAAACTTAACTGTGAATAAATAACAGCAGGATTCAGTGCTCACACAGTATGAATAACACTAACTTTGGAGATTATTCACGCACAGCTATATATTTTACTATCTAGTGTGTGACTGCCGCCTCATTCTGGATGGTTTCTGGACATGGATGCGGTCACGAGTCATCTTCACTCAGGGACAGGATTGAGACGAACTCCAGAAGCGAGGAGCTGTGTTTGACTGATTTATGTGGGATGTGTTGGAGAGACCTTAAAGTTGTCTTCTGTCTCTGGTTTACTCTGTTTCTGGTGTGTTTTCCTGATCGAGCTGAGTGGGCGTGGCAACACATGCTCGGCAGGAAGCGTTTCTGCGTCATGCTTTGATTTATCTGTTCTCTTTTTATTGATGTTACAGTATTGATCTGCTTAAacccttgtttttgtttgctaaaTTTAAATTTCTAAATCGTGTTGTAAGTCAGGAGTTGAAAAAAATGGCCTTATTACAGAAAGAGCGGGAAATTGTGAATTTAAGGGAGAGGTGTAGTAAAACTATCGAGGGCTTTAAAGATAAGgagttaaaatgatttgtgcACTGCTATAGATGATGATCTATTTTTCTCAACCTGCATTAAATATTagggtttatttattaaaattgttcaaTCAAGTAGCTTTAAAAGAATCTGAATTCTTTCTTAATGCCCATTTTATCAATTGAATAACCTAGAATATTTATAGCATACTTGATTGTCCCATATTAGTCAAAAAAATCTGCCACATGTTTGAAAcgtcattttataaaaactggGACgacaaaaattactttaaattattcttaacacatttgaacaatatttatgcaaaattagatgcaaaaaataaaatgtatttcaaatgtaatttagatccgtattttatattatattttgattaaaatccCCTGTCACTGACCTGTGAGTGAACGTCTGAAACCACA
>TU23045
TGATGTCTGACACTGACTGACTCGAGAAAGGCTTCAAGACACTCATCTCTTCTTTCGCAGCATCACCACCAACAGACTGAAATCAAATCCTGTCGTGAACGTGTCTGTAAGAATCAGACAGGAGCCTCCTCTTCTGAAGATGAAACGAGAGCCGCTGCACAAATCTGTcgtaaaataatcaaataaacagcGTTTAAGTGAAGCAACATGAGTTTTGATCATTCCTCCACCATGTCCCAGCCTTTAGTAGAAGTTTGTCTTGAATGGATATCGTGGATGGATATCAGGCTCTGATCTATGATTATAACATCAGGGATATACTGGTTTGGAGAAACTTAACTGTGAATAAATAACAGCAGGATTCAGTGCTCACACAGTATGAATAACACTAACTTTGGAGATTATTC
>XR_006248068.1
ttttaaagcccAGTATCTAGCACCTGAAGAATATTTTGCTAAAGTGCTACCTATTTTCTATAATATACCTAGGTTTAATGTCCAGTacatgatattattttaatgctgcaTTGTGGCTGGGCAGGCTTGGATATATATCATTAAAAGTCTCTTCTTGTGTTCATCTGCATTGCTCTCTGAAGCAGGGTATTTTTTAGAAACAGAAAGGGACTTTCCACGTGACGTTTGAACATTTCCGGCTGTATGTGATGTCTGACACTGACTGACTCGAGAAAGGCTTCAAGACACTCATCTCTTCTTTCGCAGCATCACCACCAACAGACTGAAATCAAATCCTGTCGTGAACGTGTCTGTAAGAATCAGACAGGAGCCTCCTCTTCTGAAGATGAAACGAGAGCCGCTGCACAAATCTGTcgtaaaataatcaaataaacagcGTTTAAGTGAAGCAACATGAGTTTTGATCATTCCTCCACCATGTCCCAGCCTTTAGTAGAAGTTTGTCTTGAATGGATATCGTGGATGGATATCAGGCTCTGATCTATGATTATAACATCAGGGATATACTGGTTTGGAGAAACTTAACTGTGAATAAATAACAGCAGGATTCAGTGCTCACACAGTATGAATAACACTAACTTTGGAGATTATTCACGCACAGCTATATATTTTACTATCTAGTGTGTGACTGCCGCCTCATTCTGGATGGTTTCTGGACATGGATGCGGTCACGAGTCATCTTCACTCAGGGACAGGATTGAGACGAACTCCAGAAGCGAGGAGCTGTGTTTGACTGATTTATGTGGGATGTGTTGGAGAGACCTTAAAGTTGTCTTCTGTCTCTGGTTTACTCTGTTTCTGGTGTGTTTTCCTGATCGAGCTGAGTGGGCGTGGCAACACATGCTCGGCAGGAAGCGTTTCTGCGTCATGCTTTGATTTATCTGTTCTCTTTTTATTGATGTTACAGTATTGATCTGCTTAAacccttgtttttgtttgctaaaTTTAAATTTCTAAATCGTGTTGTAAGTCAGGAGTTGAAAAAAATGGCCTTATTACAGAAAGAGCGGGAAATTGTGAATTTAAGGGAGAGGTGTAGTAAAACTATCGAGGGCTTTAAAGATAAGgagttaaaatgatttgtgcACTGCTATAGATGATGATCTATTTTTCTCAACCTGCATTAAATATTagggtttatttattaaaattgttcaaTCAAGTAGCTTTAAAAGAATCTGAATTCTTTCTTAATGCCCATTTTATCAATTGAATAACCTAGAATATTTATAGCATACTTGATTGTCCCATATTAGTCAAAAAAATCTGCCACATGTTTGAAAcgtcattttataaaaactggGACgacaaaaattactt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23041 False 1285 lncRNA 0.32 2 695997 697709
TU23045 False 407 lncRNA 0.37 2 695997 696831
XR_006248068.1 True 1380 lncRNA 0.38 2 695751 697558

Neighbor

gene id symbol gene type direction distance location
LOC122332267 NA coding upstream 56452 638828 ~ 639299 (+)
LOC122329695 LOC107574151,LOC107661760,LOC107705958,LOC107574149,LOC107712638,LOC107575271 coding upstream 85390 571938 ~ 610361 (+)
LOC122332242 NA coding upstream 123798 569324 ~ 571953 (+)
LOC122331907 NA coding upstream 242877 450471 ~ 452874 (+)
LOC122329895 NA coding upstream 402339 289442 ~ 293412 (+)
LOC122329668 NA coding downstream 2006 699715 ~ 711401 (+)
LOC122330397 NA coding downstream 46244 743953 ~ 753713 (+)
LOC122332312 NA coding downstream 85701 783410 ~ 792668 (+)
LOC122330100 NA coding downstream 146894 844603 ~ 846445 (+)
LOC122330251 NA coding downstream 313602 1011311 ~ 1013643 (+)
G15586 NA non-coding upstream 17656 677066 ~ 678095 (+)
G15550 si:ch211-108d22.2 non-coding upstream 173079 520750 ~ 522672 (+)
G15546 NA non-coding upstream 215451 478439 ~ 480300 (+)
LOC122330779 NA non-coding upstream 239085 454766 ~ 456666 (+)
G15507 NA non-coding upstream 272853 421535 ~ 422898 (+)
LOC122330767 NA non-coding downstream 84274 781983 ~ 783076 (+)
LOC122330666 NA non-coding downstream 95541 793250 ~ 815075 (+)
G15592 NA non-coding downstream 119780 817489 ~ 893665 (+)
G15601 LOC107574600 non-coding downstream 134550 832259 ~ 837762 (+)
LOC122330703 NA non-coding downstream 149578 847287 ~ 849709 (+)
LOC122330407 NA other upstream 59512 625364 ~ 636239 (+)
G15563 NA other upstream 138670 553698 ~ 557081 (+)
LOC122331567 NA other upstream 385842 73544 ~ 309909 (+)
LOC122330774 NA other upstream 396430 55175 ~ 299321 (+)
LOC122330463 NA other downstream 56721 754430 ~ 775534 (+)
LOC122330135 NA other downstream 308274 1005983 ~ 1009431 (+)
LOC122330066 NA other downstream 349303 1047012 ~ 1051151 (+)
G15939 NA other downstream 593260 1290969 ~ 1291564 (+)
G15955 NA other downstream 693030 1390739 ~ 1392850 (+)

Expression


Co-expression Network