G15507


Basic Information

Item Value
gene id G15507
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 421535 ~ 422898 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU23049
TCTTTTCTGTTCTGCAGTCATACAGCATGCCGAGCTGGAAGGGTCTCCCAAGGGCAGCCATTTCTATCACATTCACTCCCACTGAATCCATGCTGAGAAAAAGGGGAGGAAAACTGGTTACGAAGACCGCGGTATCAGGCTCTGTAAGGTAGTGTTGTAATGCATACAGGATAtgtggaaatatatataaatattgggTGTGTTCGGGTTATGGCTCGCTGCCATGAAGGGTTTATGTTGTACTTACCAAACGACTGAACAAAGACCGATACGAAAAAGGAGACAGAGACTAACCTGCAGCTGCTAAGATAGTTAATGAGCATGGGATGTTATACATGTTATGCTTAAAAGTGCTGCATGATCAAtaatcacaaaacacacacacacccgtaCCAAGTGTGCCTTAAACTTCCCTTAAAGTGACGTAACATCTGCAAAATGAACGCACTATAGGGTTTAAATACTTTTCTATTTCGTAATGATTTTGCAGACACGTCACAAACCTGTTTTTGCTTCGCTCTTATGGGTGAAGGGCAGAACGacgtgaagaaaagaaaaagaattgcTCACTGGTACGACAAGAGCTCCTCGACGAAATCCAGAACAGCCATCGGTTATTACTTTATGTTATATTTCAGATCCAGTGTGTTGTTGTTTGCGCCGTTTTTGCAGCTTCGAGCGATTTATACAGTTTTTCTCCGGAAATCATCTCATTATAACAAAGTGTTGACGCAAAGCAAGCACGTACAGTATATCTACATCGTGTGTTTTCTGCTAGATGTACTTCacctaaatatacaaataaacgtCATACTTACTTGGAAGCACTGGGTCTGAGGCTGGGCTTCAACAAAATACCGGAAAATAGTGAACTTTCGCTTCGAGCAGTCACGTGACGCCGCGGGTTTATAACGCTGTTCAATTCTTCTATAAGAAccctttaaaatatacaaatatactatCCGTATTTAATATAGCCTATGACCTATTCATATATTAATCCTATTAGAAAATCATAAATTGACATAAGTCTAccccatacaaaaaaaaaaatatatatatatatatatatatatatatatatatatattgtgacaggTCCCGAtctaccatcagcgttgccctgggaataaaccacGAGCACCTGGAAAAGCCACTGATCACCGGACtcgccgcacctggagctcgtttgccggtggccagataagccacgtcagGCTCACACTCCGGTGAGCTACCACACTcctacatgctgtctctgactgttatctcttttgtatcttctagaagccagtccttgaaccgcga

Function

GO:

id name namespace
GO:0030163 protein catabolic process biological_process
GO:0009057 macromolecule catabolic process biological_process
GO:0044257 cellular protein catabolic process biological_process
GO:0044265 cellular macromolecule catabolic process biological_process
GO:0051603 proteolysis involved in cellular protein catabolic process biological_process
GO:0046980 tapasin binding molecular_function

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
TU23049 True 1308 lncRNA 0.37 2 421535 422898

Neighbor

gene id symbol gene type direction distance location
LOC122329895 NA coding upstream 128123 289442 ~ 293412 (+)
LOC122331655 NA coding upstream 143303 266330 ~ 278232 (+)
LOC122330203 NA coding upstream 153280 245228 ~ 268255 (+)
LOC122329952 NA coding upstream 202421 215085 ~ 219114 (+)
LOC122331645 LOC107736793 coding upstream 407379 7079 ~ 14156 (+)
LOC122331907 NA coding downstream 27573 450471 ~ 452874 (+)
LOC122332242 NA coding downstream 146426 569324 ~ 571953 (+)
LOC122329695 LOC107574151,LOC107661760,LOC107705958,LOC107574149,LOC107712638,LOC107575271 coding downstream 149040 571938 ~ 610361 (+)
LOC122332267 NA coding downstream 215930 638828 ~ 639299 (+)
LOC122329668 NA coding downstream 276817 699715 ~ 711401 (+)
G15527 NA non-coding upstream 53584 361919 ~ 367951 (+)
G15520 NA non-coding upstream 67316 321355 ~ 354219 (+)
G15524 NA non-coding upstream 68452 351964 ~ 353083 (+)
G15478 NA non-coding upstream 70266 98643 ~ 351269 (+)
G15477 NA non-coding upstream 73137 79191 ~ 348398 (+)
LOC122330779 NA non-coding downstream 31868 454766 ~ 456666 (+)
G15546 NA non-coding downstream 55541 478439 ~ 480300 (+)
G15550 si:ch211-108d22.2 non-coding downstream 97852 520750 ~ 522672 (+)
G15586 NA non-coding downstream 254168 677066 ~ 678095 (+)
LOC122330711 NA non-coding downstream 272853 695751 ~ 697709 (+)
LOC122331567 NA other upstream 111626 73544 ~ 309909 (+)
LOC122330774 NA other upstream 122214 55175 ~ 299321 (+)
G15563 NA other downstream 130800 553698 ~ 557081 (+)
LOC122330407 NA other downstream 202466 625364 ~ 636239 (+)
LOC122330463 NA other downstream 331532 754430 ~ 775534 (+)
LOC122330135 NA other downstream 583085 1005983 ~ 1009431 (+)
LOC122330066 NA other downstream 624114 1047012 ~ 1051151 (+)

Expression


Co-expression Network