G15546


Basic Information

Item Value
gene id G15546
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 478439 ~ 480300 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU23100
ATGCGACAAAATAAGTCCTTTATCCTCATTTAGGTTGATTTGATACATTCAATCAAGTAGTAAAAGACAGTCTTTGTCATTCTATGAATGCGAGGAACAAAAAGTGAAAGGGTCCAGAAGGAATCTCAGTCTGGTTCTTGTCTGCTGCATGTAAGAGGTCAATCTGAGGAAGTCTTCAGATTCACATGTGTTATTGGCCTCAAATTTGACACAATCTCCTTCCTGAGTTGGATTATTAGTATGTGTTCTTTTGTTGAAAGCTGTGAAAGAGTGGGTTAGATTTACTTCAGACTGGCACTGGGATCTGATGTATAATCATCATGTTGTCTCTGTGGAATTCAGCTCTTTGTGTTTgaacaatgttttgtttgaatCTTAAATCTGATCTGTTCAaagtttaaaggggtcatcggatGAAATATTCACTTTTACATGATGTTCGAACCCTCACCACCCTATGatgataaaaatccacccagtgttgttttttttagaatccTCATAAGTCAGGGgtctcaaactcagttcctggcgggccggagcctGACAACCCTGTCATAAGTCATAAACGCTTTCACAGATCAAGCTGCTCACAAATTCTTGGCTGTGTGTCCGATTGCTGACACTGGTACGAACTGCGGAACATATAAAACTAGCACATTTTGGCAAAGTCTAATTGCAATCAAAGTTTCCAAATCACTGCAGGGATGTGCATTTTTTGCAATTCAGTCATCAATAGGTTTCAAAAACGATTAACTAATTAGTCGATGGGGTGGGGCATGTGCGGAGGGCGGGGCATGGCTGTAATGGAGATATTTAAGActtatgaaaattaatataattttatcacATTAAAACATGTCTATGAACAGATGTTTACACATTAGATTatgatgttattaaaaaaaaataaaaaaataacctcaAGTGAAGCGGACTTCTTGCCAATATGCTGAAACCTGTTCTATGTCACATCCTATGATATTAAACCGATAACTTAGGTTTAATATGGGCAtctgatgacccctttaacatgCGATTCAAAAGGTATCgtttccacactgagagcaggcGAAAGGTTTTTATGAAGTGTGAGTTAGCAAATGAATTGTAAGTTGCCTTTTCCgtgtaaaactctttccacactgagagcaacAAAAAGACTTTATTCCAGCATGACTTAACATGTGCCTCTCGAGGCTTTCTTTCTGTGTAAAACATTTCCCACACTGAGCGCAGCCAAAAGACTTTATTCCAGCATGAATTAACATGTGGGTATTGAGGCTTCCTTTCTGTGTaaaactctttccgcactgagagcagctgaaaggctttTCCGAAGAGTGAGTTACCAAATGAATCTTAAGTTGTCCTTTCTgtgtgaaactctttccacattcAGAGCAGCTGAAAGCTTTTATTCCAGCATGAATTAACATGTGCTTATTGAGGCTTCCTTTCTGTGtaaaactcttcccacactgagagcaggTGAAAGACTTTATTTCAGCATGAACTAACATGTGATTCTTAAGGTTTTCTTTGCGTTTGAAAGTGtttccgcactgagagcagctgaaaggcctTTTGACGTCTGTTTTCTGAATGCTCCATCTCACTAGTGTTTCTCCAGTGTCTTCATG

Function

GO: NA

KEGG:

id description
ko04144 Endocytosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU23100 True 1643 lncRNA 0.35 3 478439 480300

Neighbor

gene id symbol gene type direction distance location
LOC122331907 NA coding upstream 25565 450471 ~ 452874 (+)
LOC122329895 NA coding upstream 185027 289442 ~ 293412 (+)
LOC122331655 NA coding upstream 200207 266330 ~ 278232 (+)
LOC122330203 NA coding upstream 210184 245228 ~ 268255 (+)
LOC122329952 NA coding upstream 259325 215085 ~ 219114 (+)
LOC122332242 NA coding downstream 89024 569324 ~ 571953 (+)
LOC122329695 LOC107574151,LOC107661760,LOC107705958,LOC107574149,LOC107712638,LOC107575271 coding downstream 91638 571938 ~ 610361 (+)
LOC122332267 NA coding downstream 158528 638828 ~ 639299 (+)
LOC122329668 NA coding downstream 219415 699715 ~ 711401 (+)
LOC122330397 NA coding downstream 263653 743953 ~ 753713 (+)
LOC122330779 NA non-coding upstream 21773 454766 ~ 456666 (+)
G15507 NA non-coding upstream 55541 421535 ~ 422898 (+)
G15527 NA non-coding upstream 110488 361919 ~ 367951 (+)
G15520 NA non-coding upstream 124220 321355 ~ 354219 (+)
G15524 NA non-coding upstream 125356 351964 ~ 353083 (+)
G15550 si:ch211-108d22.2 non-coding downstream 40450 520750 ~ 522672 (+)
G15586 NA non-coding downstream 196766 677066 ~ 678095 (+)
LOC122330711 NA non-coding downstream 215451 695751 ~ 697709 (+)
LOC122330767 NA non-coding downstream 301683 781983 ~ 783076 (+)
LOC122330666 NA non-coding downstream 312950 793250 ~ 815075 (+)
LOC122331567 NA other upstream 168530 73544 ~ 309909 (+)
LOC122330774 NA other upstream 179118 55175 ~ 299321 (+)
G15563 NA other downstream 73398 553698 ~ 557081 (+)
LOC122330407 NA other downstream 145064 625364 ~ 636239 (+)
LOC122330463 NA other downstream 274130 754430 ~ 775534 (+)
LOC122330135 NA other downstream 525683 1005983 ~ 1009431 (+)
LOC122330066 NA other downstream 566712 1047012 ~ 1051151 (+)

Expression


Co-expression Network