LOC122330407


Basic Information

Item Value
gene id LOC122330407
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 625364 ~ 636239 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU23155
aagaagttcaGTTTCAGCGTGCGCTCTATTCTTCGTGATGCTGGTCTAAATAGAAACGTCGGGACTGAGTTTTGAATCAAGCAGGAATATCTGGAAGAGGATCTGCTGCAGTGAAGATGATGTTTGTTAAAGAAGAGATTGAGGAGAACACGAGAGAACCAGGAACCTGGAGAATACATCACAAGGAACCAGAAACTTTGAGAATAATACAAGAGGAACAAGgcCTGATGAAAGTGAAAGAAGAGGGACAAGATCTGAATGATGTGGAGGAGAAAAATCACGATCATGAAGACACTGGAGAAACACTAGTGAGATGGAGCATTCAGAAAACAGACGTCAAAaggcctttcagctgctctcagtgcggaaaCACTTTCAAACGCAAAGAAAACCTTAAGAATCACATGTTAGTTCATGCTGAAATAAAGTCTTTCAcctgctctcagtgtgggaagagttttaCACAGAAAGGAAGCCTCAATAAGCACATGTTAATTCATGCTGGAATAAAAGCTTTCAGCTGCTCTgaatgtggaaagagtttcacacAGAAAGGACAACTTAAGATTCATTTGGTAACTCACTCTTCGGAa
>XM_043227369.1
gaagaagttcaGTTTCAGCGTGCGCTCTATTCTTCGTGATGCTGGTCTAAATAGAAACGTCGGGACTGAGTTTTGAATCAAGCAGGAATATCTGGAAGAGGATCTGCTGCAGTGAAGATGATGTTTGTTAAAGAAGAGATTGAGGAGAACACGAGAGAACCAGGAACATGGAGAATAAAACGCGAGGAAACTGAAACCTGGAGAATACATCACAAGGAACCAGAAACTTTGAGAATAATACAAGAGGAACAAGgcCTGATGAAAGTGAAAGAAGAGGGACAAGATCTGAATGATGTGGAGGAGAAAAATCACGATCATGAAGACACTGGAGAAACACTAGTGAGATGGAGCATTCAGAAAACAGACGTCAAAaggcctttcagctgctctcagtgcggaaaCACTTTCAAACGCAAAGAAAACCTTAAGAATCACATGTTAGTTCATGCTGAAATAAAGTCTTTCAcctgctctcagtgtgggaagagttttaCACAGAAAGGAAGCCTCAATAAGCACATGTTAATTCATGCTGGAATAAAAGCTTTCAGCTGCTCTgaatgtggaaagagtttcacacAGAAAGGACAACTTAAGATTCATTTGGTAACTCACTCTTCGGAaaagcctttcagctgctctcagtgcggaaagagttttACACAGAAAGGAAGCCTCAGTGAtcacatgttaattcatgctggattaaagccttttagctgctctcagtgtggaaagagttttacacAGAAGGCAAACCTCAATACCCACATGTTAATTCATGCTGGAATAAAGTCTTTTGGCTGCGCTCAGTGTGGGAAATGTTTTACACAGAAAGAAAGCCTCGAGAGGCACATGTTAAGTCATGCTGGAATAAAGTCTTTTTgttgctctcagtgtggaaagagttttacacGGAAAAGGCAACTTACAATTCATTTGCTAACTCACACTTCATAAAAACCTTTCgcctgctctcagtgtggaaacGATACCTTTGAATCGcatgttaaaggggtcatcagaTGCCCATATTAAACCTAAGTTATCGGTTTAATATCATAGGATGTGACATAGAACAGGTTTCAGTATATTGGCATGAAGTCCGCTTCTCTTgaggttattttatttatttttttttaataacatcatAATCTAATGTGTAAACATCTGTTCATAGACATGTTTTAATgtgataaaattatattaattttcataagTCTTAAATATCTCCATTACAGCCATGCCCCGCCC

Function

GO:

id name namespace
GO:0030097 hemopoiesis biological_process
GO:0030098 lymphocyte differentiation biological_process
GO:0042110 T cell activation biological_process
GO:0048534 hematopoietic or lymphoid organ development biological_process
GO:0043383 negative T cell selection biological_process
GO:0030217 T cell differentiation biological_process
GO:0045058 T cell selection biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23155 False 593 TUCP 0.39 4 625365 635609
XM_043227369.1 True 1254 mRNA 0.39 3 625364 636239

Neighbor

gene id symbol gene type direction distance location
LOC122329695 LOC107574151,LOC107661760,LOC107705958,LOC107574149,LOC107712638,LOC107575271 coding upstream 15003 571938 ~ 610361 (+)
LOC122332242 NA coding upstream 53411 569324 ~ 571953 (+)
LOC122331907 NA coding upstream 172490 450471 ~ 452874 (+)
LOC122329895 NA coding upstream 331952 289442 ~ 293412 (+)
LOC122331655 NA coding upstream 347132 266330 ~ 278232 (+)
LOC122332267 NA coding downstream 2589 638828 ~ 639299 (+)
LOC122329668 NA coding downstream 63476 699715 ~ 711401 (+)
LOC122330397 NA coding downstream 107714 743953 ~ 753713 (+)
LOC122332312 NA coding downstream 147171 783410 ~ 792668 (+)
LOC122330100 NA coding downstream 208364 844603 ~ 846445 (+)
G15550 si:ch211-108d22.2 non-coding upstream 102692 520750 ~ 522672 (+)
G15546 NA non-coding upstream 145064 478439 ~ 480300 (+)
LOC122330779 NA non-coding upstream 168698 454766 ~ 456666 (+)
G15507 NA non-coding upstream 202466 421535 ~ 422898 (+)
G15527 NA non-coding upstream 257413 361919 ~ 367951 (+)
G15586 NA non-coding downstream 40827 677066 ~ 678095 (+)
LOC122330711 NA non-coding downstream 59512 695751 ~ 697709 (+)
LOC122330767 NA non-coding downstream 145744 781983 ~ 783076 (+)
LOC122330666 NA non-coding downstream 157011 793250 ~ 815075 (+)
G15592 NA non-coding downstream 181250 817489 ~ 893665 (+)
G15563 NA other upstream 68283 553698 ~ 557081 (+)
LOC122331567 NA other upstream 315455 73544 ~ 309909 (+)
LOC122330774 NA other upstream 326043 55175 ~ 299321 (+)
LOC122330463 NA other downstream 118191 754430 ~ 775534 (+)
LOC122330135 NA other downstream 369744 1005983 ~ 1009431 (+)
LOC122330066 NA other downstream 410773 1047012 ~ 1051151 (+)
G15939 NA other downstream 654730 1290969 ~ 1291564 (+)
G15955 NA other downstream 754500 1390739 ~ 1392850 (+)

Expression


Co-expression Network