LOC122330135


Basic Information

Item Value
gene id LOC122330135
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1005983 ~ 1009431 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU23504
GCTGGTTTGAAGTAAACAGGAATATCTGGAGGAGAATCATCTGAACTGATCTTCTGCTGTGAAGATgatgtttattaaagaggagagtgaggaGGACACGAGTGAACCAGAaacatggagaataaaacacGAGGAACAGGGAGGCCTCATGAAAGTGAAAGAAGAAGGACAAGATCTGAACGAGGTGGAGGAGGAACATCAGGATGTCAGTGGAGAAACTACTGAGGTCAAAaggcctttcagctgctctcggTGTGGAAAGGTGTACAAACATAAAAGAAGCCTTAATAAACACATGAGAATTCATAGCGAGGAAAAGCCATTCGtctgctctcagtgcggaaaCACGTTCAAGCGTAGAGGAGGCTTCATGAAACACATGAGAATTCATGGCGAGAAAAGGCCATTCGtctgctctcagtgcggaaaAGCTTTCACGTGTAACAAAAACCTTAAAGATCACTTGTTAATTCACGCCGGGATAaaacctttcagctgctctgagTGCGGGAAGAGATTTACGCAAAAAGTGCATCTTGAGAATCATCTGGTAACTCACTCTTCAGAGaagcctttcagctgctctcggTGCGGAAGCACTTTCACTCGTAAAGCGAGCTTTCATCAGCACATGTTAATTCATAATGAAATAAAGCCTTTCGGCTGCTCTCAGTGTGAAAAGAGTTTCACGCAGAAAGTACACCTTGACAATCATTTAGTGACACACTCCTCAGAaaagcctttcagctgctctcagtgcgggaagagtttcacaCGCAAAGCTAGTCTTGAGAAGCACGTGTTGATTCACGCCGGGATAAAGCCCTTCAGCTGCTCggagtgtgggaagagtttcgtATGTAAAGAAATCCTGAGGAATCACATGGTAGTTCATACTGGGATAaaacctttcagctgctctcagtgtggaaagactTTCACGCAGAAAGGACACCTTAAGGATCATCTGGTAACTCACTCTTCGGAAAACCCTTTCACTTGCtctcagtgcgggaagagtttcacgTGTAAAGGATACCTTAAGACtcacatgttaattcatgcTGAAATAAAGCCTTTTAcctgctctcagtgtgggaAGGGTTTCATATGCAGAGGAAACCTGAGGAATCACATGGTAGTTCATACCGGGAACaggcctttcagctgctctgacTGTGGAAAGAGCTTTACACAGAAAGGACACCTTAAAGTTCATGCtgccaaa
>XM_043226983.1
TTTGCTCGTGATGCTGGTTTGAAGTAAACAGGAATATCTGGAGGAGAATCATCTGAACTGATCTTCTGCTGTGAAGATgatgtttattaaagaggagagtgaggaGGACACGAGTGAACCAGAaacatggagaataaaacacGAGGAACAGGGAGGCCTCATGAAAGTGAAAGAAGAAGGACAAGATCTGAACGAGGTGGAGGAGGAACATCAGGATGTCAGTGGAGAAACTACTGAGGTCAAAaggcctttcagctgctctcggTGTGGAAAGGTGTACAAACATAAAAGAAGCCTTAATAAACACATGAGAATTCATAGCGAGGAAAAGCCATTCGtctgctctcagtgcggaaaCACGTTCAAGCGTAGAGGAGGCTTCATGAAACACATGAGAATTCATGGCGAGAAAAGGCCATTCGtctgctctcagtgcggaaaAGCTTTCACGTGTAACAAAAACCTTAAAGATCACTTGTTAATTCACGCCGGGATAaaacctttcagctgctctgagTGCGGGAAGAGATTTACGCAAAAAGTGCATCTTGAGAATCATCTGGTAACTCACTCTTCAGAGaagcctttcagctgctctcggTGCGGAAGCACTTTCACTCGTAAAGCGAGCTTTCATCAGCACATGTTAATTCATAATGAAATAAAGCCTTTCGGCTGCTCTCAGTGTGAAAAGAGTTTCACGCAGAAAGTACACCTTGACAATCATTTAGTGACACACTCCTCAGAaaagcctttcagctgctctcagtgcgggaagagtttcacaCGCAAAGCTAGTCTTGAGAAGCACGTGTTGATTCACGCCGGGATAAAGCCCTTCAGCTGCTCggagtgtgggaagagtttcgtATGTAAAGAAATCCTGAGGAATCACATGGTAGTTCATACTGGGATAaaacctttcagctgctctcagtgtggaaagactTTCACGCAGAAAGGACACCTTAAGGATCATCTGGTAACTCACTCTTCGGAAAACCCTTTCACTTGCtctcagtgcgggaagagtttcacgTGTAAAGGATACCTTAAGACtcacatgttaattcatgcTGAAATAAAGCCTTTTAcctgctctcagtgtgggaAGGGTTTCATATGCAGAGGAAACCTGAGGAATCACATGGTAGTTCATACCGGGAACaggcctttcagctgctctgacTGTGGAAAGAGCTTTACACAGAAAGGACACCTTAAAGTTCATGCtgccaaaacacatttatttttagacaagTGATTTCTTTCCTCTGACGACTGAAACTTGCGCACCGTGTAGGGCTGGATGTTGTTAAAGGTGACCTATTTCAtggtaaacatttaatataaaataccaTCGAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23504 False 1228 TUCP 0.45 2 1005995 1009303
XM_043226983.1 True 1368 mRNA 0.44 2 1005983 1009431

Neighbor

gene id symbol gene type direction distance location
LOC122330100 NA coding upstream 159538 844603 ~ 846445 (+)
LOC122332312 NA coding upstream 213315 783410 ~ 792668 (+)
LOC122330397 NA coding upstream 252270 743953 ~ 753713 (+)
LOC122329668 NA coding upstream 294582 699715 ~ 711401 (+)
LOC122332267 NA coding upstream 366684 638828 ~ 639299 (+)
LOC122330251 NA coding downstream 1880 1011311 ~ 1013643 (+)
LOC122332569 NA coding downstream 8276 1017707 ~ 1019352 (+)
LOC122332610 NA coding downstream 25821 1035252 ~ 1045858 (+)
LOC122330262 LOC107561206,LOC107727046,LOC107679474 coding downstream 52845 1062276 ~ 1064324 (+)
LOC122330011 NA coding downstream 69502 1078933 ~ 1084889 (+)
G15806 NA non-coding upstream 45889 959579 ~ 960094 (+)
G15803 NA non-coding upstream 50179 955507 ~ 955804 (+)
G15592 NA non-coding upstream 112318 817489 ~ 893665 (+)
LOC122330733 NA non-coding upstream 115077 875247 ~ 890906 (+)
G15607 NA non-coding upstream 153304 850016 ~ 852679 (+)
G15833 NA non-coding downstream 60258 1069689 ~ 1070138 (+)
G15882 NA non-coding downstream 105964 1115395 ~ 1115671 (+)
G15883 NA non-coding downstream 107792 1117223 ~ 1117666 (+)
G15886 NA non-coding downstream 111209 1120640 ~ 1133792 (+)
G15889 NA non-coding downstream 111909 1121340 ~ 1123300 (+)
LOC122330463 NA other upstream 230449 754430 ~ 775534 (+)
LOC122330407 NA other upstream 369744 625364 ~ 636239 (+)
G15563 NA other upstream 448902 553698 ~ 557081 (+)
LOC122331567 NA other upstream 696074 73544 ~ 309909 (+)
LOC122330774 NA other upstream 706662 55175 ~ 299321 (+)
LOC122330066 NA other downstream 37581 1047012 ~ 1051151 (+)
G15939 NA other downstream 281538 1290969 ~ 1291564 (+)
G15955 NA other downstream 381308 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 386416 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 549956 1559387 ~ 1649494 (+)

Expression


Co-expression Network