LOC122330066


Basic Information

Item Value
gene id LOC122330066
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1047012 ~ 1051151 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU23529
attctctcttctcttcagtCTCCAGTCCAGCGGGTGGCGCGAAAACACGCGTTTGTTTGTCAAACACCATTAAACCTCAGAGGAAGAAGAAGTTTAGTTTCACCGCGATCTCTGTGGTTTTGTCCAGATGCTGCTTTAACGCAAAGtcaaagaaatgtttctgtaaatacagaaatacaaattTCGAATCTGTTTCATGCATATAATATTCTCATCCTCAAAGTCGTGACTAAGTTTTGAAGAAAACAGAGATCTGCTGCTGTGAAGATGATGTTTGTTAAAGAAGAGAGTGAGGAGAACATGATTGAACCAGAaacatggagaataaaacacgaggaaccagaaacatggaaaataaaacacgaggaaccagaaacatggaaaataaaacacgAGGAACCAGAAGCCTGGAGAATAAAACACGAGAAACAAGGAGacCTGATGAATGTGAAGGACGAAAGACAAGATCTGAATGAATTGGAGAAACCTCAGGATCAAAAAGATCATAATGTAAATGAACAAAGCAGCACTGAAGTCAGAaaacctttcagctgctctcagtgtggaaaagCTTTCACGTGTAAGAAAAGCCTGAGGAATCACATGTTAATTCACGCCGGGATAAAGCCTTTTacctgctctcagtgtggaaagagttttaccAGGAAAAGTCAACTTAAGGATCACATGCATATCCACTCTTCAGAAaaacctttcagctgctctcagtgcggaaagagtttcacGCGTAAAACAAA
>XM_043226875.1
tgtgtgtaCGGCCAATCCATATGTTTTgtgaaatgatgatgatgatgatttctgGTTGCGGACAATTAAAATGTCTCCACAATTTACTTTTGAGGAAATATCATAGCATCATGCTACAGCACACATTCTGTAAGCTGCAGTTCTGAGGTCTCAGTGAAATGCAACACACAGTCATGGCCataaatattggcacccttggtaaacatgatcaaagaaggctttaaaaatgtatctgcaTTGTAAAtccttttaaacttttatttacaaaaaaaattcatttaattggATTGGACAAgaaaaatactgtatgtttgatacatacatcaattttttttctctgccaaGATGAGGCGCTTTAAAGCGAGAGAAAAAGcaggacacttttttttattttaatatgagcTCGTATTTAAGGCTTTTGAAAAATCGTGTCGCCgcacataaataaaagtatgtaaaaCACATCCTACCCGACACTAACTTCATTACACATCACTAAAACCTCAACTGCgtttgtaaacaaacacaaagcgGAAGTTAGCTTAGGGCCGGGTGCGTGCGCTCGAAGAAACCgcaattattaaatgttacctttttattaatatattatcttTACTTTTTACGTTTTATCAACAACTTTCATGGTCTGCTGATTGTATTTGCATTAGGGAGAAAAGTAGTTTTACTATTATACTTTTAATCTCTAAATTTCATCAGTATAAGTAAATTTTCCACCAcatatgttttgattttttttatatatatccaATTTAATTGCGATAGAGTAATCAGGTCATcagcattttacagtttttttgctcttattgttattaataattattattataatatcaagGCTAACTCTTATCATTGTCACGTGCTTAATTTCTATATGCTGCAATGTTAGGTGATTTCATTGAAATGTTACGGTAAAAATTCTAATCCTCACACGCGAAAACTCACGCTTAAAAtcggctttaaaaaaaatcccattctctcttctcttcagtCTCCAGTCCAGCGGGTGGCGCGAAAACACGCGTTTGTTTGTCAAACACCATTAAACCTCAGAGGAAGAAGAAGTTTAGTTTCACCGCGATCTCTGTGGTTTTGTCCAGATGCTGCTTTAACGCAAAGtcaaagaaatgtttctgtaaatacagaaatacaaattTCGAATCTGTTTCATGCATATAATATTCTCATCCTCAAAGTCGTGACTAAGTTTTGAAGAAAACAGAGATCTGCTGCTGTGAAGATGATGTTTGTTAAAGAAGAGAGTGAGGAGAACATGATTGAACCAGAaacatggagaataaaacacgaggaaccagaaacatggaaaataaaacacgaggaaccagaaacatggaaaataaaacacgAGGAACCAGAAGCCTGGAGAATAAAACACGAGAAACAAGGAGacCTGATGAATGTGAAGGACGAAAGACAAGATCTGAATGAATTGGAGAAACCTCAGGATCAAAAAGATCATAATGTAAATGAACAAAGCAGCACTGAAGTCAGAaaacctttcagctgctctcagtgtggaaaagCTTTCACGTGTAAGAAAAGCCTGAGGAATCACATGTTAATTCACGCCGGGATAAAGCCTTTTacctgctctcagtgtggaaagagttttaccAGGAAAAGTCAACTTAAGGATCACATGCATATCCACTCTTCAGAAaaacctttcagctgctctcagtgcggaaagagtttcacGCGTAAAACAAACCTTAAGACTCACATGTTAATTCATTCTGGGATaaagcctttcagctgctctgagTGCGGAAGGAGTTTTACAAAGAAAGAACACCTTAAGAATCATTCGGCTACTCACTCTTTAGAaaagcctttcagctgctctcagtgcggaaagTCTTTTGTGAGTAAAGAAAGCTTTAAGATTCACACGTTAGTTCATGCTGGAATaaagcctttcagctgctctgagTGTGGAAAGACTTTTACGAAGAAAAGACAACTTACAGATCATCTGGTAACTCACTCTTCAGAAAAACCTTTCGtctgctctcagtgcggaaagTCTTTCACTTGTAAAACAAACCTTATGACTCACATGTTAATTCACGCCGGGATAAAGCCTTTTACCTGCTCtgagtgcgggaagagttttaTCAGGAAAAGTCAACTTAAGGATCACATGCATATCCACTCTTCAGAAaaacctttcagctgctctcagtgcggaaagagtttcatACGTAAACCAAACCTTAAGACTCACATGTTAATTCACGATGGAATaaagcctttcagctgctctaACTGCGGAAAGAGTTTTACAAAGAAAGAATACCTTAAGAAGCATTTGGCTACTCACTCTTTAGAaaagcctttcagctgctctcagtgcggaagGAGCTTTACAAAGAAAAGTCAACTTACAGATCATCTGGTAACTCACTCTTCAGAAAAACCTTTCGtctgctctcagtgcggaaagTCTTTCACTCGTAAATCAAACCTTAAGAATCACATGTTAATTCACGCCGGGATAAAGCCTTTTACCTGCTCtgagtgtgggaagagttttaCCAGGAAAAGTCAACTTAAGGATCACATGCATATCCACCcttcagctgctctcagtgaGGAAAGTCTTTCAAACATAAAGAAAGCCTCAAGACTCCAATGTTAATTCATGCCGGGATAAAGTCCTTTCAACTGCTCTCAATGTGGAAGGACACCTTAAGGGCCATTTGCTAACTCACTCTTCGGAAAAGCCTTTTCACCTGTCAGTGCGGAAAGTTTTTCCCACGTAAAACAAACCTTAAGACTCACATGTTAATTTATGCTGGGATaaagcctttcagctgctctgagTGCGGAAAGACTTTTACACAGAAAGTGCAACTTGAGAGTCACTTGGTAAGTCACTCTTCAGAAAAGAGTTTCATCTGCTCTCAGTGCAGAAAGTCTTTTAGCTACGAAGGAAGCCTTACGACACACTTGAGAATTCACAGTGGGCACAACGGATAGTAACCCTAGAtcttaacaataaattaaagcaaagaTGACCGCTAGAACTGAGAACTCCATCGAGAATATTCCATCTCAGAGATGATATCAGTCACTCGGTATGTACGTTGAATGAAGgtaaaatcttttaatattcatgaacttCCAGAGAAAGCTCGCCCCACACGCTGCGTCTGGTGTGGACACCCAAACTGCTTGCAAGCGCTTGAATTGTCGCATTGCGTGTAGTAAGGACATAACGTTAtggctgttttctgttttccttcACATGTAATGGAAACCTTAAAAATCACATTGTAGTTCATACTGGACTAAAGCCTTTGATGCAAACCTCGGGAGCTTGGCAGAAAGGTCTTGGTGTACAGAGAGAAGAGCAGCGCTGAGAGAACATAACCCTGAGGTGCACCGGTGCAGATCGGTCAGAAAGCTATGAACAGAGAGCTAGGCTAGCTCAGTATGTAGGAGTGTTGGGATGATTGTGTTGAAAGCagtatttttgtggttttttttgctatttggATCTAAACTTTTTCTTGCTCAACTTCTCTGAACGATTAGTTTCATGTTCTGTTTACATGTAACACACTgctacacaaataaatgtactgtttaaATTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23529 False 758 TUCP 0.40 2 1048003 1049260
XM_043226875.1 True 3640 mRNA 0.39 2 1047012 1051151

Neighbor

gene id symbol gene type direction distance location
LOC122332610 NA coding upstream 1154 1035252 ~ 1045858 (+)
LOC122332569 NA coding upstream 27660 1017707 ~ 1019352 (+)
LOC122330251 NA coding upstream 33369 1011311 ~ 1013643 (+)
LOC122330100 NA coding upstream 200567 844603 ~ 846445 (+)
LOC122332312 NA coding upstream 254344 783410 ~ 792668 (+)
LOC122330262 LOC107561206,LOC107727046,LOC107679474 coding downstream 11125 1062276 ~ 1064324 (+)
LOC122330011 NA coding downstream 27782 1078933 ~ 1084889 (+)
LOC122329984 NA coding downstream 34138 1085289 ~ 1089633 (+)
LOC122330159 NA coding downstream 39341 1090492 ~ 1102100 (+)
LOC122330518 NA coding downstream 51710 1102861 ~ 1105179 (+)
G15806 NA non-coding upstream 86918 959579 ~ 960094 (+)
G15803 NA non-coding upstream 91208 955507 ~ 955804 (+)
LOC122330733 NA non-coding upstream 156106 875247 ~ 890906 (+)
G15607 NA non-coding upstream 194333 850016 ~ 852679 (+)
LOC122330703 NA non-coding upstream 197303 847287 ~ 849709 (+)
G15833 NA non-coding downstream 18538 1069689 ~ 1070138 (+)
G15882 NA non-coding downstream 64244 1115395 ~ 1115671 (+)
G15883 NA non-coding downstream 66072 1117223 ~ 1117666 (+)
G15886 NA non-coding downstream 69489 1120640 ~ 1133792 (+)
G15889 NA non-coding downstream 70189 1121340 ~ 1123300 (+)
LOC122330135 NA other upstream 37581 1005983 ~ 1009431 (+)
LOC122330463 NA other upstream 271478 754430 ~ 775534 (+)
LOC122330407 NA other upstream 410773 625364 ~ 636239 (+)
G15563 NA other upstream 489931 553698 ~ 557081 (+)
LOC122331567 NA other upstream 737103 73544 ~ 309909 (+)
G15939 NA other downstream 239818 1290969 ~ 1291564 (+)
G15955 NA other downstream 339588 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 344696 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 508236 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 568161 1619312 ~ 1865229 (+)

Expression


Co-expression Network