G15833


Basic Information

Item Value
gene id G15833
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1069689 ~ 1070138 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU23542
TTCCTCTTGGATCATTCTCCATGTCtcctcttgttttattttgcagggTTCTGGTTCCTCGTATTTTATTCTCCAGGTTTCTGGGTCCtcttgttttattctccatgttTCTGGTTCCTCGTGTTTTATTTCCCATGTTTCTGGTTCCTCGTGTTTTATTTCCCATGTTTCTGGTTCCTCGTGCTTTATTTCCCATGTTTCTTGTTCTTCGTGTTTTATTTCGCATGTTTCTGGCGCTCTGATGTTCTCCTCGCTCTCCTCTTTAACAAACATCATTTTCACAGCAGCAGATCTCAGTACAGAGATATTCCTGCTTTAAAGCCtacggctgtgtgtgtgtgagaatattACATGTATGTAATGCACAGAAAATTATTGTAATAGTTTGTATTGGCAGCATCAACGCAACACAACAGAGAA
>TU23543
TTCCTCTTGGATCATTCTCCATGTCtcctcttgttttattttgcagggTTCTGGTTCCTCGTATTTTATTCTCCAGGTTTCTGGGTCCtcttgttttattctccatgttTCTGGTTCCTCGTGTTTTATTTCCCATGTTTCTGGTTCCTCGTGCTTTATTTCCCATGTTTCTTGTTCTTCGTGTTTTATTTCGCATGTTTCTGGCGCTCTGATGTTCTCCTCGCTCTCCTCTTTAACAAACATCATTTTCACAGCAGCAGATCTCAGTACAGAGATATTCCTGCTTTAAAGCCtacggctgtgtgtgtgtgagaatattACATGTATGTAATGCACAGAAAATTATTGTAATAGTTTGTATTGGCAGCATCAACGCAACACAACAGAGAA

Function

GO: NA

KEGG:

id description
ko00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU23542 True 420 lncRNA 0.53 2 1069689 1070138
TU23543 False 390 lncRNA 0.35 2 1069689 1070138

Neighbor

gene id symbol gene type direction distance location
LOC122330262 LOC107561206,LOC107727046,LOC107679474 coding upstream 5365 1062276 ~ 1064324 (+)
LOC122332610 NA coding upstream 23831 1035252 ~ 1045858 (+)
LOC122332569 NA coding upstream 50337 1017707 ~ 1019352 (+)
LOC122330251 NA coding upstream 56046 1011311 ~ 1013643 (+)
LOC122330100 NA coding upstream 223244 844603 ~ 846445 (+)
LOC122330011 NA coding downstream 8795 1078933 ~ 1084889 (+)
LOC122329984 NA coding downstream 15151 1085289 ~ 1089633 (+)
LOC122330159 NA coding downstream 20354 1090492 ~ 1102100 (+)
LOC122330518 NA coding downstream 32723 1102861 ~ 1105179 (+)
LOC122330224 NA coding downstream 84485 1154623 ~ 1157439 (+)
G15806 NA non-coding upstream 109595 959579 ~ 960094 (+)
G15803 NA non-coding upstream 113885 955507 ~ 955804 (+)
LOC122330733 NA non-coding upstream 178783 875247 ~ 890906 (+)
G15607 NA non-coding upstream 217010 850016 ~ 852679 (+)
LOC122330703 NA non-coding upstream 219980 847287 ~ 849709 (+)
G15882 NA non-coding downstream 45257 1115395 ~ 1115671 (+)
G15883 NA non-coding downstream 47085 1117223 ~ 1117666 (+)
G15886 NA non-coding downstream 50502 1120640 ~ 1133792 (+)
G15889 NA non-coding downstream 51202 1121340 ~ 1123300 (+)
G15887 NA non-coding downstream 59754 1129892 ~ 1131475 (+)
LOC122330066 NA other upstream 18538 1047012 ~ 1051151 (+)
LOC122330135 NA other upstream 60258 1005983 ~ 1009431 (+)
LOC122330463 NA other upstream 294155 754430 ~ 775534 (+)
LOC122330407 NA other upstream 433450 625364 ~ 636239 (+)
G15563 NA other upstream 512608 553698 ~ 557081 (+)
G15939 NA other downstream 220831 1290969 ~ 1291564 (+)
G15955 NA other downstream 320601 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 325709 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 489249 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 549174 1619312 ~ 1865229 (+)

Expression


Co-expression Network