G15889


Basic Information

Item Value
gene id G15889
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1121340 ~ 1123300 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU23624
AGCAGGATTTAAGATGTCAATCGCTGAAAATAATATCCAATTATCCTCATTTTTCCCTGAAGGCAGAAACACTGCAGGTCACAATTTGTGACGATGCAGGGAAGAGCCAATGAGCGTTCATTTTTCCAGCGGTTAAACCTGTCGTTTCTTAAAGTGGGAACAATTCAATTTAGACCGATTGCGTCAGTTAGCGCAGACTTTGCTTCCTCTTGTAATTATGTTGCGCTTCTGGtgtattttatggttttatgttCAGTCACATCACGTCAGAGAAAACGCCTcggaaaacaatgcaaataccacataaaaagaaattgttaaacatttgcagtaatgttattttttagagATGTTTAAGATCATGCAGTCATCTTCTTCAAAAGGAGTGGCAGCAGAAAGCACAAtactaaataacatttttttcagtaggTAAACTATtaaagatttaataataatcttcCCACAATTCATGAGATAATAGTGCATGAAGGCATAATTAAGGCATGAATTTATGCATGAATTCATTGCATattcaaacaataataaaaggtCAATATAAAACAAGTCTTTTACAGGGAAATACTACTTTTTGATTACTCAGCTGATCAATGTGAAATACATCCCTAGAAAATTAAATTACGACCAAAGAGTAAGCATACCATACAGATATTTCCTCAGATGTTTCgccatttccatttaaatacttaaattagAAGATAACAATCATAAAAGCGTCACGGGGCATGACCTGAAAGCTCAGGTATAAAACACCACGAGGTGTTCAGCAGCCGAAAGCTCAGGGTTTAGCAGATGGTGAATTAACCTTGCTTTCTGTCTTTAAAGTTATTCAGGACCAAACGAGAGTACCTCTGGgtgaagaaaatgttttgtgaggAGGCGGGGCCAACACCATCAGTCTTTTAAACTGATTGGCTGGTTgtccaaaaagaaaataaaacttcggtctgattttgtttgaaatgataCGGCTTAGTTTGAAGTATATCAGAGTTTTAACTGTGATGGGTTTTTGTGTGCCTGTTTAAAACAGATGAGTTGATGAAACACTTCCCGCACGCGGCGCACTgatacggtttctctccggtgtggatcctctcgtgtGTTTTCAGGTATCCCGACTGACTGAACCTCTTGTCGCAGTGCGAACACTTATAACATTTCTCAGCAgtgtggatcctctcgtgtCTTTTCAGATTGGACAAATCGTTGAAAATCTTGTCGCAGTGCGTGCACTTGTAAgctttctctccggtgtggatcctctcgtgtCTTTGCAGGTCTCCTGGCCTTTTGAACCTCTTGCTGCAGTGTGAACACTTATATGgattctctccggtgtggatcctctcgtgtCTTTTCATATTTGATAAATGACTCATTCTCTTGTCGCAGTGTGAACACTTATAAGCTCTCTCTTcggtgtggatcctctcatGCAGTTTTGCAGAGGTGTCCGAGACGCGCTCAAAGCGCTTGTAATCTCTCACAGCAGTACGTCTGAGCCGTGTGGAGTGGATGTTCATGCGTTTCTTAAGGTGGGCTAAATgcgtgaaactctttccacgCTGAGTGCAGGTGAACGACGTCTCAGCTCTTCTTTTCTTCATATCTTTCTCTTTGCTACGAGAGCAACTCAAGGGTTTTTCTCCAGCTTCGTCTCTTGATTCTTgattcttctctttttcttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23624 True 1709 lncRNA 0.46 2 1121340 1123300

Neighbor

gene id symbol gene type direction distance location
LOC122330518 NA coding upstream 16161 1102861 ~ 1105179 (+)
LOC122330159 NA coding upstream 19240 1090492 ~ 1102100 (+)
LOC122329984 NA coding upstream 31707 1085289 ~ 1089633 (+)
LOC122330011 NA coding upstream 36451 1078933 ~ 1084889 (+)
LOC122330262 LOC107561206,LOC107727046,LOC107679474 coding upstream 57016 1062276 ~ 1064324 (+)
LOC122330224 NA coding downstream 31323 1154623 ~ 1157439 (+)
LOC122329844 LOC107563756,LOC107731666 coding downstream 36937 1160237 ~ 1176071 (+)
LOC122330304 LOC107561208,LOC107727047,LOC107679470 coding downstream 52932 1176232 ~ 1179341 (+)
kcnj4 kcnj4,LOC107711802,LOC107679476,LOC107727044 coding downstream 64718 1188018 ~ 1198038 (+)
sox10 sox10,LOC107674484,LOC107711804,LOC107563722,LOC107727045,LOC107679477 coding downstream 94221 1217521 ~ 1224917 (+)
G15883 NA non-coding upstream 3674 1117223 ~ 1117666 (+)
G15882 NA non-coding upstream 5669 1115395 ~ 1115671 (+)
G15833 NA non-coding upstream 51202 1069689 ~ 1070138 (+)
G15806 NA non-coding upstream 161246 959579 ~ 960094 (+)
G15803 NA non-coding upstream 165536 955507 ~ 955804 (+)
G15887 NA non-coding downstream 6592 1129892 ~ 1131475 (+)
G15911 NA non-coding downstream 29525 1152825 ~ 1153228 (+)
G15925 NA non-coding downstream 90025 1213325 ~ 1213628 (+)
G15927 NA non-coding downstream 92016 1215316 ~ 1215605 (+)
G15929 NA non-coding downstream 117046 1240346 ~ 1241047 (+)
LOC122330066 NA other upstream 70189 1047012 ~ 1051151 (+)
LOC122330135 NA other upstream 111909 1005983 ~ 1009431 (+)
LOC122330463 NA other upstream 345806 754430 ~ 775534 (+)
LOC122330407 NA other upstream 485101 625364 ~ 636239 (+)
G15563 NA other upstream 564259 553698 ~ 557081 (+)
G15939 NA other downstream 167669 1290969 ~ 1291564 (+)
G15955 NA other downstream 267439 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 272547 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 436087 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 496012 1619312 ~ 1865229 (+)

Expression


Co-expression Network