G15927


Basic Information

Item Value
gene id G15927
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1215316 ~ 1215605 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU23671
CTGGTTTATGagtaaataatcattttgattATCCCTGTAAGTTAGTTTAAGAATTAAATGTGGCGCTGGAGACACAAACGGGATCGTTCTGAACCGCCTTATTAGACGGAAATAATCAGCGTTTTGCTTTAAGTTCAAAAAAGAACGCAAAAAAGGCGAAGGCGCGCGCGAATATTAATTATCAATCAGCGCGGGTTTAACTGATTTTAATTCAAACGAATAAAAGAACGCAATGGCAATAATAATTTCGGAACTAGCAccattatgcattattatttatatatcaccGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23671 True 290 lncRNA 0.47 1 1215316 1215605

Neighbor

gene id symbol gene type direction distance location
kcnj4 kcnj4,LOC107711802,LOC107679476,LOC107727044 coding upstream 17278 1188018 ~ 1198038 (+)
LOC122330304 LOC107561208,LOC107727047,LOC107679470 coding upstream 35975 1176232 ~ 1179341 (+)
LOC122329844 LOC107563756,LOC107731666 coding upstream 39245 1160237 ~ 1176071 (+)
LOC122330224 NA coding upstream 57877 1154623 ~ 1157439 (+)
LOC122330518 NA coding upstream 110137 1102861 ~ 1105179 (+)
sox10 sox10,LOC107674484,LOC107711804,LOC107563722,LOC107727045,LOC107679477 coding downstream 1916 1217521 ~ 1224917 (+)
LOC122329817 LOC100537134 coding downstream 14396 1230001 ~ 1234904 (+)
LOC122332730 NA coding downstream 156927 1372532 ~ 1374290 (+)
LOC122329966 NA coding downstream 160844 1376449 ~ 1380026 (+)
LOC122330340 NA coding downstream 171879 1387484 ~ 1389699 (+)
G15925 NA non-coding upstream 1688 1213325 ~ 1213628 (+)
G15911 NA non-coding upstream 62088 1152825 ~ 1153228 (+)
G15886 NA non-coding upstream 81524 1120640 ~ 1133792 (+)
G15887 NA non-coding upstream 83841 1129892 ~ 1131475 (+)
G15889 NA non-coding upstream 92016 1121340 ~ 1123300 (+)
G15929 NA non-coding downstream 24741 1240346 ~ 1241047 (+)
LOC122330723 NA non-coding downstream 63658 1279263 ~ 1281171 (+)
LOC122330682 NA non-coding downstream 167643 1383248 ~ 1384894 (+)
G15967 NA non-coding downstream 198610 1414215 ~ 1415199 (+)
G15972 NA non-coding downstream 225654 1441259 ~ 1441742 (+)
LOC122330066 NA other upstream 164165 1047012 ~ 1051151 (+)
LOC122330135 NA other upstream 205885 1005983 ~ 1009431 (+)
LOC122330463 NA other upstream 439782 754430 ~ 775534 (+)
LOC122330407 NA other upstream 579077 625364 ~ 636239 (+)
G15563 NA other upstream 658235 553698 ~ 557081 (+)
G15939 NA other downstream 75364 1290969 ~ 1291564 (+)
G15955 NA other downstream 175134 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 180242 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 343782 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 403707 1619312 ~ 1865229 (+)

Expression


Co-expression Network